refactor: Update all codex commands to use -s danger-full-access and correct syntax

- Move -s parameter to end of command: codex --full-auto exec "..." -s danger-full-access
- Change default sandbox mode from workspace-write to danger-full-access
- Add missing --full-auto parameter to commands requiring autonomous development
- Add missing exec parameter to all codex commands
- Add missing -s danger-full-access parameter to multi-line commands
- Update all documentation and examples to use consistent syntax
- Fix CLAUDE.md detection functionality in detect_changed_modules.sh script

Files updated:
- Core configuration: CLAUDE.md, RELEASE_NOTES_v1.3.0.md
- Documentation: tools-implementation-guide.md, intelligent-tools-strategy.md
- Command files: All .claude/commands/codex/*.md and workflow/*.md files
- Agent templates: action-planning-agent.md
- Scripts: detect_changed_modules.sh

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>

.claude/agents/action-planning-agent.md

@@ -55,7 +55,7 @@ You are a pure execution agent specialized in creating actionable implementation
   - **Method Selection**: Use method specified in each step (gemini/codex/manual/auto-detected)
 - **CLI Commands**:
   - **Gemini**: `bash(~/.claude/scripts/gemini-wrapper -p "$(cat template_path) [expanded_action]")`
-  - **Codex**: `bash(codex -s workspace-write --full-auto exec "$(cat template_path) [expanded_action]")`
+  - **Codex**: `bash(codex --full-auto exec "$(cat template_path) [expanded_action]" -s danger-full-access)`
 - **Follow Guidelines**: @~/.claude/workflows/intelligent-tools-strategy.md and @~/.claude/workflows/tools-implementation-guide.md
 
 ### Pre-Execution Analysis