refactor: Standardize command naming conventions and remove parent relationships

Updates all command files to use consistent naming without parent field:
- Remove parent field from all command frontmatter
- Standardize name field to use simple names instead of prefixed names
- Fix usage patterns for brainstorm commands to use proper workflow namespace
- Add new medium-project-update.sh script for batch updates

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>

.claude/commands/gemini/analyze.md

@@ -1,6 +1,6 @@
 ---
-name: gemini-analyze
+name: analyze
-parent: /gemini
+
 description: Advanced Gemini CLI analysis with template-driven pattern detection and comprehensive codebase insights
 usage: /gemini:analyze <target>
 argument-hint: "analysis target or description"

.claude/commands/gemini/chat.md

@@ -1,6 +1,6 @@
 ---
-name: gemini-chat
+name: chat
-parent: /gemini
+
 description: Simple Gemini CLI interaction command for direct codebase analysis
 usage: /gemini:chat "inquiry"
 argument-hint: "your question or analysis request"

.claude/commands/gemini/chat/bug-fix.md

@@ -1,6 +1,6 @@
 ---
 name: bug-fix
-parent: /gemini/chat
+
 description: Bug analysis and fix suggestions using specialized template
 usage: /gemini:chat:bug-fix "bug description"
 argument-hint: "description of the bug or error you're experiencing"

.claude/commands/gemini/chat/plan.md

@@ -1,6 +1,5 @@
 ---
 name: plan
-parent: /gemini/chat
 description: Project planning and architecture analysis using specialized template
 usage: /gemini:chat:plan "planning topic"
 argument-hint: "planning topic or architectural challenge to analyze"

.claude/commands/gemini/execute.md

@@ -1,6 +1,6 @@
 ---
-name: gemini-execute
+name: execute
-parent: /gemini
+
 description: Intelligent context inference executor with auto-approval capabilities, supporting user descriptions and task ID execution modes
 usage: /gemini:execute <description|task-id>
 argument-hint: "implementation description or task-id"

.claude/commands/task/breakdown.md

@@ -1,5 +1,5 @@
 ---
-name: task-breakdown
+name: breakdown
 description: Intelligent task decomposition with context-aware subtask generation
 usage: /task:breakdown <task-id>
 argument-hint: task-id

.claude/commands/task/create.md

@@ -1,5 +1,5 @@
 ---
-name: task-create
+name: create
 description: Create implementation tasks with automatic context awareness
 usage: /task:create "title"
 argument-hint: "task title"

.claude/commands/task/execute.md

@@ -1,5 +1,5 @@
 ---
-name: task-execute
+name: execute
 description: Execute tasks with appropriate agents and context-aware orchestration
 usage: /task:execute <task-id>
 argument-hint: task-id

.claude/commands/task/replan.md

@@ -1,5 +1,5 @@
 ---
-name: task-replan
+name: replan
 description: Replan individual tasks with detailed user input and change tracking
 usage: /task:replan <task-id> [input]
 argument-hint: task-id ["text"|file.md|ISS-001]

.claude/commands/workflow/brainstorm/business-analyst.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:business-analyst
+name: business-analyst
 description: Business analyst perspective brainstorming for process optimization and business efficiency analysis
-usage: /brainstorm:business-analyst <topic>
+usage: /workflow:brainstorm:business-analyst <topic>
 argument-hint: "topic or challenge to analyze from business analysis perspective"
 examples:
-  - /brainstorm:business-analyst "workflow automation opportunities"
+  - /workflow:brainstorm:business-analyst "workflow automation opportunities"
-  - /brainstorm:business-analyst "business process optimization"
+  - /workflow:brainstorm:business-analyst "business process optimization"
-  - /brainstorm:business-analyst "cost reduction initiatives"
+  - /workflow:brainstorm:business-analyst "cost reduction initiatives"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/data-architect.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:data-architect
+name: data-architect
 description: Data architect perspective brainstorming for data modeling, flow, and analytics analysis
-usage: /brainstorm:data-architect <topic>
+usage: /workflow:brainstorm:data-architect <topic>
 argument-hint: "topic or challenge to analyze from data architecture perspective"
 examples:
-  - /brainstorm:data-architect "user analytics data pipeline"
+  - /workflow:brainstorm:data-architect "user analytics data pipeline"
-  - /brainstorm:data-architect "real-time data processing system"
+  - /workflow:brainstorm:data-architect "real-time data processing system"
-  - /brainstorm:data-architect "data warehouse modernization"
+  - /workflow:brainstorm:data-architect "data warehouse modernization"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/feature-planner.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:feature-planner
+name: planner
 description: Feature planner perspective brainstorming for feature development and planning analysis
-usage: /brainstorm:feature-planner <topic>
+usage: /workflow:brainstorm:feature-planner <topic>
 argument-hint: "topic or challenge to analyze from feature planning perspective"
 examples:
-  - /brainstorm:feature-planner "user dashboard enhancement"
+  - /workflow:brainstorm:feature-planner "user dashboard enhancement"
-  - /brainstorm:feature-planner "mobile app feature roadmap"
+  - /workflow:brainstorm:feature-planner "mobile app feature roadmap"
-  - /brainstorm:feature-planner "integration capabilities planning"
+  - /workflow:brainstorm:feature-planner "integration capabilities planning"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/innovation-lead.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:innovation-lead
+name: innovation-lead
 description: Innovation lead perspective brainstorming for emerging technologies and future opportunities analysis
-usage: /brainstorm:innovation-lead <topic>
+usage: /workflow:brainstorm:innovation-lead <topic>
 argument-hint: "topic or challenge to analyze from innovation and emerging technology perspective"
 examples:
-  - /brainstorm:innovation-lead "AI integration opportunities"
+  - /workflow:brainstorm:innovation-lead "AI integration opportunities"
-  - /brainstorm:innovation-lead "future technology trends"
+  - /workflow:brainstorm:innovation-lead "future technology trends"
-  - /brainstorm:innovation-lead "disruptive innovation strategy"
+  - /workflow:brainstorm:innovation-lead "disruptive innovation strategy"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/product-manager.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:product-manager
+name: product-manager
 description: Product manager perspective brainstorming for user needs and business value analysis
-usage: /brainstorm:product-manager <topic>
+usage: /workflow:brainstorm:product-manager <topic>
 argument-hint: "topic or challenge to analyze from product management perspective"
 examples:
-  - /brainstorm:product-manager "user authentication redesign"
+  - /workflow:brainstorm:product-manager "user authentication redesign"
-  - /brainstorm:product-manager "mobile app performance optimization"
+  - /workflow:brainstorm:product-manager "mobile app performance optimization"
-  - /brainstorm:product-manager "feature prioritization strategy"
+  - /workflow:brainstorm:product-manager "feature prioritization strategy"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/security-expert.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:security-expert
+name: security-expert
 description: Security expert perspective brainstorming for threat modeling and security architecture analysis
-usage: /brainstorm:security-expert <topic>
+usage: /workflow:brainstorm:security-expert <topic>
 argument-hint: "topic or challenge to analyze from cybersecurity perspective"
 examples:
-  - /brainstorm:security-expert "user authentication security review"
+  - /workflow:brainstorm:security-expert "user authentication security review"
-  - /brainstorm:security-expert "API security architecture"
+  - /workflow:brainstorm:security-expert "API security architecture"
-  - /brainstorm:security-expert "data protection compliance strategy"
+  - /workflow:brainstorm:security-expert "data protection compliance strategy"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/synthesis.md

@@ -1,10 +1,10 @@
 ---
-name: brainstorm:synthesis
+name: synthesis
 description: Synthesize all brainstorming role perspectives into comprehensive analysis and recommendations
-usage: /brainstorm:synthesis
+usage: /workflow:brainstorm:synthesis
 argument-hint: "no arguments required - analyzes existing brainstorming session outputs"
 examples:
-  - /brainstorm:synthesis
+  - /workflow:brainstorm:synthesis
 allowed-tools: Read(*), Write(*), TodoWrite(*), Glob(*)
 ---
 

.claude/commands/workflow/brainstorm/system-architect.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:system-architect
+name: system-architect
 description: System architect perspective brainstorming for technical architecture and scalability analysis
-usage: /brainstorm:system-architect <topic>
+usage: /workflow:brainstorm:system-architect <topic>
 argument-hint: "topic or challenge to analyze from system architecture perspective"
 examples:
-  - /brainstorm:system-architect "user authentication redesign"
+  - /workflow:brainstorm:system-architect "user authentication redesign"
-  - /brainstorm:system-architect "microservices migration strategy"
+  - /workflow:brainstorm:system-architect "microservices migration strategy"
-  - /brainstorm:system-architect "system performance optimization"
+  - /workflow:brainstorm:system-architect "system performance optimization"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/ui-designer.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:ui-designer
+name: ui-designer
 description: UI designer perspective brainstorming for user experience and interface design analysis
-usage: /brainstorm:ui-designer <topic>
+usage: /workflow:brainstorm:ui-designer <topic>
 argument-hint: "topic or challenge to analyze from UI/UX design perspective"
 examples:
-  - /brainstorm:ui-designer "user authentication redesign"
+  - /workflow:brainstorm:ui-designer "user authentication redesign"
-  - /brainstorm:ui-designer "mobile app navigation improvement"
+  - /workflow:brainstorm:ui-designer "mobile app navigation improvement"
-  - /brainstorm:ui-designer "accessibility enhancement strategy"
+  - /workflow:brainstorm:ui-designer "accessibility enhancement strategy"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/brainstorm/user-researcher.md

@@ -1,12 +1,12 @@
 ---
-name: brainstorm:user-researcher
+name: user-researcher
 description: User researcher perspective brainstorming for user behavior analysis and research insights
-usage: /brainstorm:user-researcher <topic>
+usage: /workflow:brainstorm:user-researcher <topic>
 argument-hint: "topic or challenge to analyze from user research perspective"
 examples:
-  - /brainstorm:user-researcher "user onboarding experience"
+  - /workflow:brainstorm:user-researcher "user onboarding experience"
-  - /brainstorm:user-researcher "mobile app usability issues"
+  - /workflow:brainstorm:user-researcher "mobile app usability issues"
-  - /brainstorm:user-researcher "feature adoption analysis"
+  - /workflow:brainstorm:user-researcher "feature adoption analysis"
 allowed-tools: Task(conceptual-planning-agent), TodoWrite(*)
 ---
 

.claude/commands/workflow/execute.md

@@ -1,5 +1,5 @@
 ---
-name: workflow-execute
+name: execute
 description: Coordinate agents for existing workflow tasks with automatic discovery
 usage: /workflow:execute
 argument-hint: none

.claude/commands/workflow/issue/close.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-issue-close
+name: close
 description: Close a completed or obsolete workflow issue
 usage: /workflow:issue:close <issue-id> [reason]
-parent: /workflow:issue
+
 examples:
   - /workflow:issue:close ISS-001
   - /workflow:issue:close ISS-001 "Feature implemented in PR #42"

.claude/commands/workflow/issue/create.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-issue-create
+name: create
 description: Create a new issue or change request
 usage: /workflow:issue:create "issue description"
-parent: /workflow:issue
+
 examples:
   - /workflow:issue:create "Add OAuth2 social login support"
   - /workflow:issue:create "Fix user avatar security vulnerability"

.claude/commands/workflow/issue/list.md

@@ -1,8 +1,7 @@
 ---
-name: workflow-issue-list
+name: list
 description: List and filter workflow issues
 usage: /workflow:issue:list
-parent: /workflow:issue
 examples:
   - /workflow:issue:list
   - /workflow:issue:list --open

.claude/commands/workflow/issue/update.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-issue-update
+name: update
 description: Update an existing workflow issue
 usage: /workflow:issue:update <issue-id> [changes]
-parent: /workflow:issue
+
 examples:
   - /workflow:issue:update ISS-001
   - /workflow:issue:update ISS-001 --priority=critical

.claude/commands/workflow/plan-deep.md

@@ -1,15 +1,15 @@
 ---
-name: workflow-plan-deep
+name: plan-deep
 description: Deep technical planning with Gemini CLI analysis and action-planning-agent
-usage: /workflow:plan:deep <task_description>
+usage: /workflow:plan-deep <task_description>
 argument-hint: "task description" | requirements.md
 examples:
-  - /workflow:plan:deep "Refactor authentication system to use JWT"
+  - /workflow:plan-deep "Refactor authentication system to use JWT"
-  - /workflow:plan:deep "Implement real-time notifications across modules"
+  - /workflow:plan-deep "Implement real-time notifications across modules"
-  - /workflow:plan:deep requirements.md
+  - /workflow:plan-deep requirements.md
 ---
 
-# Workflow Plan Deep Command (/workflow:plan:deep)
+# Workflow Plan Deep Command (/workflow:plan-deep)
 
 ## Overview
 Creates comprehensive implementation plans through deep codebase analysis using Gemini CLI and the action-planning-agent. This command enforces multi-dimensional context gathering before planning, ensuring technical decisions are grounded in actual codebase understanding.
@@ -17,7 +17,7 @@ Creates comprehensive implementation plans through deep codebase analysis using
 ## Key Differentiators
 
 ### vs /workflow:plan
-| Feature | /workflow:plan | /workflow:plan:deep |
+| Feature | /workflow:plan | /workflow:plan-deep |
 |---------|---------------|-------------------|
 | **Analysis Depth** | Basic requirements extraction | Deep codebase analysis |
 | **Gemini CLI** | Optional | **Mandatory (via agent)** |
@@ -175,7 +175,7 @@ def process_plan_deep_command(input):
 
 ### Example 1: Cross-Module Refactoring
 ```bash
-/workflow:plan:deep "Refactor user authentication to use JWT tokens across all services"
+/workflow:plan-deep "Refactor user authentication to use JWT tokens across all services"
 ```
 Generates comprehensive plan analyzing:
 - Current auth implementation
@@ -185,7 +185,7 @@ Generates comprehensive plan analyzing:
 
 ### Example 2: Performance Optimization
 ```bash
-/workflow:plan:deep "Optimize database query performance in reporting module"
+/workflow:plan-deep "Optimize database query performance in reporting module"
 ```
 Creates detailed plan including:
 - Current query patterns analysis
@@ -195,7 +195,7 @@ Creates detailed plan including:
 
 ### Example 3: Architecture Enhancement
 ```bash
-/workflow:plan:deep "Implement event-driven architecture for order processing"
+/workflow:plan-deep "Implement event-driven architecture for order processing"
 ```
 Produces hierarchical plan with:
 - Current architecture assessment

.claude/commands/workflow/plan.md

@@ -1,5 +1,5 @@
 ---
-name: workflow-plan
+name: plan
 description: Create implementation plans with intelligent input detection
 usage: /workflow:plan <input>
 argument-hint: "text description"|file.md|ISS-001|template-name

.claude/commands/workflow/review.md

@@ -1,5 +1,5 @@
 ---
-name: workflow-review
+name: review
 description: Execute review phase for quality validation
 usage: /workflow:review
 argument-hint: none

.claude/commands/workflow/session/list.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-session-list
+name: list
 description: List all workflow sessions with status
 usage: /workflow:session:list
-parent: /workflow:session
+
 ---
 
 # List Workflow Sessions (/workflow/session/list)

.claude/commands/workflow/session/pause.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-session-pause
+name: pause
 description: Pause the active workflow session
 usage: /workflow:session:pause
-parent: /workflow:session
+
 ---
 
 # Pause Workflow Session (/workflow:session:pause)

.claude/commands/workflow/session/resume.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-session-resume
+name: resume
 description: Resume the most recently paused workflow session
 usage: /workflow:session:resume
-parent: /workflow:session
+
 ---
 
 # Resume Workflow Session (/workflow:session:resume)

.claude/commands/workflow/session/start.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-session-start
+name: start
 description: Start a new workflow session
 usage: /workflow:session:start "task description"
-parent: /workflow:session
+
 examples:
   - /workflow:session:start "implement OAuth2 authentication"
   - /workflow:session:start "fix login bug"

.claude/commands/workflow/session/status.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-session-status
+name: status
 description: Show detailed status of active workflow session
 usage: /workflow:session:status
-parent: /workflow:session
+
 ---
 
 # Workflow Session Status (/workflow:session:status)

.claude/commands/workflow/session/switch.md

@@ -1,8 +1,8 @@
 ---
-name: workflow-session-switch
+name: switch
 description: Switch to a different workflow session
 usage: /workflow:session:switch <session-id>
-parent: /workflow:session
+
 examples:
   - /workflow:session:switch WFS-oauth-integration
   - /workflow:session:switch WFS-user-profile

.claude/scripts/medium-project-update.sh

@@ -0,0 +1,273 @@
+#!/bin/bash
+# medium-project-update.sh
+# Layered parallel execution for medium projects (50-200 files)
+# Emphasizes gemini CLI usage with direct file modification
+
+set -e  # Exit on any error
+
+echo "🚀 === Medium Project Layered Analysis ==="
+echo "Project: $(pwd)"
+echo "Timestamp: $(date)"
+
+# Function to check if directory exists and has files
+check_directory() {
+    local dir=$1
+    local pattern=$2
+    if [ -d "$dir" ] && find "$dir" -type f $pattern -print -quit | grep -q .; then
+        return 0
+    else
+        return 1
+    fi
+}
+
+# Function to run gemini with error handling
+run_gemini() {
+    local cmd="$1"
+    local desc="$2"
+    echo "  📝 $desc"
+    if ! eval "$cmd"; then
+        echo "  ❌ Failed: $desc"
+        return 1
+    else
+        echo "  ✅ Completed: $desc"
+        return 0
+    fi
+}
+
+echo ""
+echo "🏗️  === Layer 1: Foundation modules (parallel) ==="
+echo "Analyzing base dependencies: types, utils, core..."
+(
+  # Only run gemini commands for directories that exist
+  if check_directory "src/types" "-name '*.ts' -o -name '*.js'"; then
+    run_gemini "gemini -yolo -p '@{src/types/**/*} 
+Analyze type definitions and interfaces. Update src/types/CLAUDE.md with:
+- Type architecture patterns
+- Interface design principles  
+- Type safety guidelines
+- Usage examples'" "Type definitions analysis" &
+  fi
+
+  if check_directory "src/utils" "-name '*.ts' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{src/utils/**/*} 
+Analyze utility functions and helpers. Update src/utils/CLAUDE.md with:
+- Utility function patterns
+- Helper library organization
+- Common functionality guidelines
+- Reusability principles'" "Utility functions analysis" &
+  fi
+
+  if check_directory "src/core" "-name '*.ts' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{src/core/**/*} 
+Analyze core modules and system architecture. Update src/core/CLAUDE.md with:
+- Core system architecture
+- Module initialization patterns
+- System-wide configuration
+- Base class implementations'" "Core modules analysis" &
+  fi
+
+  if check_directory "src/lib" "-name '*.ts' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{src/lib/**/*} 
+Analyze library modules and shared functionality. Update src/lib/CLAUDE.md with:
+- Shared library patterns
+- Cross-module utilities  
+- External integrations
+- Library architecture'" "Library modules analysis" &
+  fi
+
+  wait
+)
+
+echo ""
+echo "🏭 === Layer 2: Business logic (parallel, depends on Layer 1) ==="
+echo "Analyzing business modules with foundation context..."
+(
+  if check_directory "src/api" "-name '*.ts' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{src/api/**/*} @{src/core/CLAUDE.md,src/types/CLAUDE.md} 
+Analyze API endpoints and routes with core/types context. Update src/api/CLAUDE.md with:
+- API architecture patterns
+- Endpoint design principles
+- Request/response handling
+- Authentication integration
+- Error handling patterns'" "API endpoints analysis" &
+  fi
+
+  if check_directory "src/services" "-name '*.ts' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{src/services/**/*} @{src/utils/CLAUDE.md,src/types/CLAUDE.md} 
+Analyze business services with utils/types context. Update src/services/CLAUDE.md with:
+- Service layer architecture
+- Business logic patterns
+- Data processing workflows
+- Service integration patterns
+- Dependency injection'" "Business services analysis" &
+  fi
+
+  if check_directory "src/models" "-name '*.ts' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{src/models/**/*} @{src/types/CLAUDE.md} 
+Analyze data models with types context. Update src/models/CLAUDE.md with:
+- Data model architecture
+- Entity relationship patterns
+- Validation strategies
+- Model lifecycle management
+- Database integration'" "Data models analysis" &
+  fi
+
+  if check_directory "src/database" "-name '*.ts' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{src/database/**/*} @{src/models/CLAUDE.md,src/core/CLAUDE.md} 
+Analyze database layer with models/core context. Update src/database/CLAUDE.md with:
+- Database architecture
+- Query optimization patterns
+- Migration strategies
+- Connection management
+- Data access patterns'" "Database layer analysis" &
+  fi
+
+  wait
+)
+
+echo ""
+echo "🎨 === Layer 3: Application layer (depends on Layer 2) ==="
+echo "Analyzing UI and application modules with business context..."
+(
+  if check_directory "src/components" "-name '*.tsx' -o -name '*.jsx' -o -name '*.vue'"; then
+    run_gemini "gemini -yolo -p '@{src/components/**/*} @{src/api/CLAUDE.md,src/services/CLAUDE.md} 
+Analyze UI components with API/services context. Update src/components/CLAUDE.md with:
+- Component architecture patterns
+- State management strategies
+- Props and event handling
+- Component lifecycle patterns
+- Styling conventions'" "UI components analysis" &
+  fi
+
+  if check_directory "src/pages" "-name '*.tsx' -o -name '*.jsx' -o -name '*.vue'"; then
+    run_gemini "gemini -yolo -p '@{src/pages/**/*} @{src/services/CLAUDE.md,src/components/CLAUDE.md} 
+Analyze page components with services/components context. Update src/pages/CLAUDE.md with:
+- Page architecture patterns
+- Route management
+- Data fetching strategies
+- Layout compositions
+- SEO considerations'" "Page components analysis" &
+  fi
+
+  if check_directory "src/hooks" "-name '*.ts' -o -name '*.js'"; then
+    run_gemini "gemini -yolo -p '@{src/hooks/**/*} @{src/services/CLAUDE.md} 
+Analyze custom hooks with services context. Update src/hooks/CLAUDE.md with:
+- Custom hook patterns
+- State logic reusability
+- Effect management
+- Hook composition strategies
+- Performance considerations'" "Custom hooks analysis" &
+  fi
+
+  if check_directory "src/styles" "-name '*.css' -o -name '*.scss' -o -name '*.less'"; then
+    run_gemini "gemini -yolo -p '@{src/styles/**/*} @{src/components/CLAUDE.md} 
+Analyze styling with components context. Update src/styles/CLAUDE.md with:
+- Styling architecture
+- CSS methodology
+- Theme management
+- Responsive design patterns
+- Design system integration'" "Styling analysis" &
+  fi
+
+  wait
+)
+
+echo ""
+echo "📋 === Layer 4: Supporting modules (parallel) ==="
+echo "Analyzing configuration, tests, and documentation..."
+(
+  if check_directory "tests" "-name '*.test.*' -o -name '*.spec.*'"; then
+    run_gemini "gemini -yolo -p '@{tests/**/*,**/*.test.*,**/*.spec.*} 
+Analyze testing strategy and patterns. Update tests/CLAUDE.md with:
+- Testing architecture
+- Unit test patterns
+- Integration test strategies
+- Mocking and fixtures
+- Test data management
+- Coverage requirements'" "Testing strategy analysis" &
+  fi
+
+  if check_directory "config" "-name '*.json' -o -name '*.js' -o -name '*.yaml'"; then
+    run_gemini "gemini -yolo -p '@{config/**/*,*.config.*,.env*} 
+Analyze configuration management. Update config/CLAUDE.md with:
+- Configuration architecture
+- Environment management
+- Secret handling patterns
+- Build configuration
+- Deployment settings'" "Configuration analysis" &
+  fi
+
+  if check_directory "scripts" "-name '*.sh' -o -name '*.js' -o -name '*.py'"; then
+    run_gemini "gemini -yolo -p '@{scripts/**/*} 
+Analyze build and deployment scripts. Update scripts/CLAUDE.md with:
+- Build process documentation
+- Deployment workflows
+- Development scripts
+- Automation patterns
+- CI/CD integration'" "Scripts analysis" &
+  fi
+
+  wait
+)
+
+echo ""
+echo "🎯 === Layer 5: Root documentation integration ==="
+echo "Generating comprehensive root documentation..."
+
+# Collect all existing CLAUDE.md files
+existing_docs=$(find . -name "CLAUDE.md" -path "*/src/*" | sort)
+if [ -n "$existing_docs" ]; then
+    echo "Found module documentation:"
+    echo "$existing_docs" | sed 's/^/  📄 /'
+    
+    run_gemini "gemini -yolo -p '@{src/*/CLAUDE.md,tests/CLAUDE.md,config/CLAUDE.md,scripts/CLAUDE.md} @{CLAUDE.md} 
+Integrate all module documentation and update root CLAUDE.md with:
+
+## Project Overview
+- Complete project architecture summary
+- Technology stack and dependencies
+- Module integration patterns
+- Development workflow and guidelines
+
+## Architecture
+- System design principles  
+- Module interdependencies
+- Data flow patterns
+- Key architectural decisions
+
+## Development Guidelines
+- Coding standards and patterns
+- Testing strategies
+- Deployment procedures
+- Contribution guidelines
+
+## Module Summary
+- Brief overview of each module's purpose
+- Key patterns and conventions
+- Integration points
+- Performance considerations
+
+Focus on providing a comprehensive yet concise project overview that serves as the single source of truth for new developers.'" "Root documentation integration"
+else
+    echo "⚠️  No module documentation found, generating basic root documentation..."
+    run_gemini "gemini -yolo -p '@{**/*} @{CLAUDE.md} 
+Generate comprehensive root CLAUDE.md documentation with:
+- Project overview and architecture
+- Technology stack summary
+- Development guidelines
+- Key patterns and conventions'" "Basic root documentation"
+fi
+
+echo ""
+echo "✅ === Medium project update completed ==="
+echo "📊 Summary:"
+echo "  - Layered analysis completed in dependency order"
+echo "  - All gemini commands executed with -yolo for direct file modification"  
+echo "  - Module-specific CLAUDE.md files updated with contextual information"
+echo "  - Root documentation integrated with complete project overview"
+echo "  - Timestamp: $(date)"
+
+# Optional: Show generated documentation structure
+echo ""
+echo "📁 Generated documentation structure:"
+find . -name "CLAUDE.md" | sort | sed 's/^/  📄 /'