feat: Add CodexLens Manager to dashboard and enhance GPU management

- Introduced a new CodexLens Manager item in the dashboard for easier access.
- Implemented GPU management commands in the CLI, including listing available GPUs, selecting a specific GPU, and resetting to automatic detection.
- Enhanced the embedding generation process to utilize GPU resources more effectively, including batch size optimization for better performance.
- Updated the embedder to support device ID options for GPU selection, ensuring compatibility with DirectML and CUDA.
- Added detailed logging and error handling for GPU detection and selection processes.
- Updated package version to 6.2.9 and added comprehensive documentation for Codex Agent Execution Protocol.

.claude/workflows/cli-templates/protocols/analysis-protocol.md

@@ -1,9 +1,7 @@
 # Analysis Mode Protocol
 
 ## Mode Definition
-
 **Mode**: `analysis` (READ-ONLY)
-**Tools**: Gemini, Qwen (default mode)
 
 ## Operation Boundaries
 
@@ -27,8 +25,8 @@
 2. **Read** and analyze CONTEXT files thoroughly
 3. **Identify** patterns, issues, and dependencies
 4. **Generate** insights and recommendations
-5. **Output** structured analysis (text response only)
-6. **Validate** EXPECTED deliverables met
+5. **Validate** EXPECTED deliverables met
+6. **Output** structured analysis (text response only)
 
 ## Core Requirements