feat: migrate to Gemini CLI v0.11.0-nightly with native prompt support

## Major Changes

### Gemini CLI Integration (google-gemini/gemini-cli#11228)
- Migrate from wrapper scripts to native Gemini CLI v0.11.0-nightly
- Remove `-p` flag requirement for prompt strings
- Deprecate `gemini-wrapper` and `qwen-wrapper` scripts
- Update all commands and workflows to use direct CLI syntax

### Command Syntax Updates
- **Before**: `gemini -p "CONTEXT: @**/* prompt"`
- **After**: `gemini "CONTEXT: @**/* prompt"`
- Apply to all 70+ command files and workflow templates
- Maintain backward compatibility for Qwen fallback

### File Pattern Migration
- Replace `@{CLAUDE.md}` with `@CLAUDE.md`
- Replace `@{**/*}` with `@**/*`
- Update all file references to use direct @ notation
- Remove legacy brace syntax across all documentation

### Documentation Improvements
- Reorganize `intelligent-tools-strategy.md` structure
- Add Quick Start section with decision matrix
- Enhance `--include-directories` best practices
- Add comprehensive command templates and examples
- Improve navigation with clearer section hierarchy

### Files Modified (75+ files)
- Commands: All CLI commands updated (cli/, workflow/, task/, memory/)
- Workflows: Core strategy files and templates
- Agents: CLI execution agent and doc generator
- Templates: Planning roles and tech stack guides

## Breaking Changes
- Gemini CLI v0.11.0-nightly or later required
- Old wrapper scripts no longer supported
- Legacy `@{pattern}` syntax deprecated

## Migration Guide
Users should:
1. Update Gemini CLI to v0.11.0-nightly or later
2. Remove `-p` flag from existing commands
3. Update file patterns from `@{pattern}` to `@pattern`

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

.claude/commands/cli/execute.md

@@ -45,11 +45,11 @@ Auto-approves: file pattern inference, execution, **file modifications**, summar
 
 ### Context Inference
 
-Auto-selects files based on keywords and technology:
-- "auth" → `@{**/*auth*,**/*user*}`
-- "React" → `@{src/**/*.{jsx,tsx}}`
-- "api" → `@{**/api/**/*,**/routes/**/*}`
-- Always includes: `@{CLAUDE.md,**/*CLAUDE.md}`
+Auto-selects files based on keywords and technology (each @ references one pattern):
+- "auth" → `@**/*auth* @**/*user*`
+- "React" → `@src/**/*.jsx @src/**/*.tsx`
+- "api" → `@**/api/**/* @**/routes/**/*`
+- Always includes: `@CLAUDE.md @**/*CLAUDE.md`
 
 For precise file targeting, use `rg` or MCP tools to discover files first.
 
@@ -111,11 +111,11 @@ Use `resume --last` when current task extends/relates to previous execution. See
 ### Standard Mode (Default)
 ```bash
 # Gemini/Qwen: MODE=write with --approval-mode yolo
-cd . && ~/.claude/scripts/gemini-wrapper --approval-mode yolo -p "
+cd . && gemini --approval-mode yolo "
 PURPOSE: [implementation goal]
 TASK: [specific implementation]
 MODE: write
-CONTEXT: @{CLAUDE.md} [auto-detected files]
+CONTEXT: @CLAUDE.md [auto-detected files]
 EXPECTED: Working implementation with code changes
 RULES: [constraints] | Auto-approve all changes
 "