Refactor workflow output paths to use a standardized sessions directory structure

- Updated output paths in various command files to reflect the new structure: `.workflow/sessions/{session_id}/` instead of `.workflow/{session_id}/`.
- Adjusted documentation and code comments to ensure consistency across all agents and commands.
- Ensured that all references to session-related files are correctly pointing to the new directory format.

.claude/agents/action-planning-agent.md

@@ -102,7 +102,7 @@ Phase 2: Document Generation (Autonomous Output)
 1. **Extract Tasks**: Parse `analysis_results.tasks` array
 2. **Map Artifacts**: Use `artifacts_inventory` to add artifact references to task.context
 3. **Assess Complexity**: Use `analysis_results.complexity` for document structure decision
-4. **Session Paths**: Use `session_id` to construct output paths (.workflow/{session_id}/)
+4. **Session Paths**: Use `session_id` to construct output paths (.workflow/sessions/{session_id}/)
 
 ### MCP Integration Guidelines
 
@@ -244,14 +244,14 @@ Generate individual `.task/IMPL-*.json` files with:
 - Low priority: role_analyses
 
 ### 3. Implementation Plan Creation
-Generate `IMPL_PLAN.md` at `.workflow/{session_id}/IMPL_PLAN.md`:
+Generate `IMPL_PLAN.md` at `.workflow/sessions/{session_id}/IMPL_PLAN.md`:
 
 **Structure**:
 ```markdown
 ---
 identifier: {session_id}
 source: "User requirements"
-analysis: .workflow/{session_id}/.process/ANALYSIS_RESULTS.md
+analysis: .workflow/sessions/{session_id}/.process/ANALYSIS_RESULTS.md
 ---
 
 # Implementation Plan: {Project Title}
@@ -280,7 +280,7 @@ analysis: .workflow/{session_id}/.process/ANALYSIS_RESULTS.md
 ```
 
 ### 4. TODO List Generation
-Generate `TODO_LIST.md` at `.workflow/{session_id}/TODO_LIST.md`:
+Generate `TODO_LIST.md` at `.workflow/sessions/{session_id}/TODO_LIST.md`:
 
 **Structure**:
 ```markdown

.claude/agents/cli-planning-agent.md

@@ -98,7 +98,7 @@ Phase 3: Task JSON Generation
 1. Load task JSON template
 2. Populate template with parsed CLI results
 3. Add iteration context and previous attempts
-4. Write task JSON to .workflow/{session}/.task/IMPL-fix-N.json
+4. Write task JSON to .workflow/session/{session}/.task/IMPL-fix-N.json
 5. Return success status and task ID to orchestrator
 ```
 

.claude/agents/context-search-agent.md

@@ -238,7 +238,7 @@ const context = {
 
 **3.5 Brainstorm Artifacts Integration**
 
-If `.workflow/{session}/.brainstorming/` exists, read and include content:
+If `.workflow/session/{session}/.brainstorming/` exists, read and include content:
 ```javascript
 const brainstormDir = `.workflow/${session}/.brainstorming`;
 if (dir_exists(brainstormDir)) {
@@ -274,7 +274,7 @@ Calculate risk level based on:
 
 **3.7 Context Packaging & Output**
 
-**Output**: `.workflow/{session-id}/.process/context-package.json`
+**Output**: `.workflow/sessions//{session-id}/.process/context-package.json`
 
 **Note**: Task JSONs reference via `context_package_path` field (not in `artifacts`)
 
@@ -422,7 +422,7 @@ Calculate risk level based on:
 ## Quality Validation
 
 Before completion verify:
-- [ ] context-package.json in `.workflow/{session}/.process/`
+- [ ] context-package.json in `.workflow/session/{session}/.process/`
 - [ ] Valid JSON with all required fields
 - [ ] Metadata complete (description, keywords, complexity)
 - [ ] Project context documented (patterns, conventions, tech stack)
@@ -456,7 +456,7 @@ Conflict Detection:
 - Affected: {modules}
 - Mitigation: {strategy}
 
-Output: .workflow/{session}/.process/context-package.json
+Output: .workflow/session/{session}/.process/context-package.json
 (Referenced in task JSONs via top-level `context_package_path` field)
 ```
 

.claude/agents/test-context-search-agent.md

@@ -304,7 +304,7 @@ if (!validation.all_passed()) {
 ## Output Location
 
 ```
-.workflow/{test_session_id}/.process/test-context-package.json
+.workflow/sessions/{test_session_id}/.process/test-context-package.json
 ```
 
 ## Helper Functions Reference