Refactor multi-CLI planning documentation, enhance analyze-with-file skill, and implement timeout for DeepWiki API requests

- Updated SKILL.md for workflow-multi-cli-plan to streamline sections, clarify processes, and improve user decision points.
- Enhanced analyze-with-file skill to include hypothesis impact in key findings and refined recording principles for better documentation.
- Added fetchWithTimeout function to DeepWiki API calls to handle request timeouts, ensuring more robust error handling.
- Introduced new DeepWiki routes in server.ts to manage API requests effectively.
- Updated tsconfig.tsbuildinfo to reflect recent changes in the codebase structure.

ccw/src/core/server.ts

@@ -578,6 +578,11 @@ export async function startServer(options: ServerOptions = {}): Promise<http.Ser
         if (await handleMcpRoutes(routeContext)) return;
       }
 
+      // DeepWiki routes (/api/deepwiki/*)
+      if (pathname.startsWith('/api/deepwiki')) {
+        if (await handleDeepWikiRoutes(routeContext)) return;
+      }
+
       // Hooks routes (/api/hooks, /api/hook)
       if (pathname.startsWith('/api/hook')) {
         if (await handleHooksRoutes(routeContext)) return;

ccw/src/services/deepwiki-service.ts

@@ -250,6 +250,35 @@ export class DeepWikiService {
       return [];
     }
   }
+
+  /**
+   * Get storage statistics
+   * @returns Statistics object with counts
+   */
+  public getStats(): { files: number; symbols: number; docs: number; filesNeedingDocs: number; dbPath: string } {
+    const db = this.getConnection();
+    if (!db) {
+      return { files: 0, symbols: 0, docs: 0, filesNeedingDocs: 0, dbPath: this.dbPath };
+    }
+
+    try {
+      const files = db.prepare('SELECT COUNT(*) as count FROM deepwiki_files').get() as { count: number };
+      const symbols = db.prepare('SELECT COUNT(*) as count FROM deepwiki_symbols').get() as { count: number };
+      const docs = db.prepare('SELECT COUNT(*) as count FROM deepwiki_docs').get() as { count: number };
+      const filesNeedingDocs = db.prepare('SELECT COUNT(*) as count FROM deepwiki_files WHERE docs_generated = 0').get() as { count: number };
+
+      return {
+        files: files?.count || 0,
+        symbols: symbols?.count || 0,
+        docs: docs?.count || 0,
+        filesNeedingDocs: filesNeedingDocs?.count || 0,
+        dbPath: this.dbPath
+      };
+    } catch (error) {
+      console.error('[DeepWiki] Error getting stats:', error);
+      return { files: 0, symbols: 0, docs: 0, filesNeedingDocs: 0, dbPath: this.dbPath };
+    }
+  }
 }
 
 // Singleton instance