refactor: Update workflow plan system and template organization

- Remove --analyze|--deep parameters from plan.md, use default analysis
- Change .analysis to .process directory structure for better organization
- Create ANALYSIS_RESULTS.md template focused on verified results
- Add .process folder to workflow-architecture.md file structure
- Template emphasizes verification of files, methods, and commands
- Prevent execution errors from non-existent references

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>

.claude/python_script/setup.py

@@ -0,0 +1,92 @@
+#!/usr/bin/env python3
+"""
+Setup script for UltraThink Path-Aware Analyzer
+"""
+
+from setuptools import setup, find_packages
+from pathlib import Path
+
+# Read README
+readme_path = Path(__file__).parent / "README.md"
+long_description = readme_path.read_text(encoding='utf-8') if readme_path.exists() else ""
+
+# Read requirements
+requirements_path = Path(__file__).parent / "requirements.txt"
+requirements = []
+if requirements_path.exists():
+    with open(requirements_path, 'r', encoding='utf-8') as f:
+        for line in f:
+            line = line.strip()
+            if line and not line.startswith('#'):
+                requirements.append(line)
+
+setup(
+    name="ultrathink-path-analyzer",
+    version="1.0.0",
+    description="Lightweight path-aware program for intelligent file pattern detection and analysis",
+    long_description=long_description,
+    long_description_content_type="text/markdown",
+    author="UltraThink Development Team",
+    author_email="dev@ultrathink.ai",
+    url="https://github.com/ultrathink/path-analyzer",
+
+    packages=find_packages(),
+    py_modules=[
+        'analyzer',  # Main entry point
+    ],
+
+    install_requires=requirements,
+
+    extras_require={
+        'rag': [
+            'sentence-transformers>=2.2.0',
+            'numpy>=1.21.0'
+        ],
+        'nlp': [
+            'nltk>=3.8',
+            'spacy>=3.4.0'
+        ],
+        'performance': [
+            'numba>=0.56.0'
+        ],
+        'dev': [
+            'pytest>=7.0.0',
+            'pytest-cov>=4.0.0',
+            'black>=22.0.0',
+            'flake8>=5.0.0'
+        ]
+    },
+
+    entry_points={
+        'console_scripts': [
+            'path-analyzer=cli:main',
+            'path-indexer=indexer:main',
+            'analyzer=analyzer:main',  # Legacy compatibility
+            'module-analyzer=tools.module_analyzer:main',
+            'tech-stack=tools.tech_stack:main',
+        ],
+    },
+
+    classifiers=[
+        "Development Status :: 4 - Beta",
+        "Intended Audience :: Developers",
+        "Topic :: Software Development :: Tools",
+        "License :: OSI Approved :: MIT License",
+        "Programming Language :: Python :: 3",
+        "Programming Language :: Python :: 3.8",
+        "Programming Language :: Python :: 3.9",
+        "Programming Language :: Python :: 3.10",
+        "Programming Language :: Python :: 3.11",
+        "Operating System :: OS Independent",
+    ],
+
+    python_requires=">=3.8",
+
+    keywords="ai, analysis, path-detection, code-analysis, file-matching, rag, nlp",
+
+    project_urls={
+        "Bug Reports": "https://github.com/ultrathink/path-analyzer/issues",
+        "Source": "https://github.com/ultrathink/path-analyzer",
+        "Documentation": "https://github.com/ultrathink/path-analyzer/docs",
+    },
+)