Changed loadClaudeCliTools() to only load tools explicitly defined
in user config. Previously, DEFAULT_TOOLS_CONFIG.tools was spread
before user tools, causing all default tools to be loaded even if
not present in user config.
User config now has complete control over which tools are loaded.
- Implemented issue discovery prompt to analyze code from various perspectives (bug, UX, test, quality, security, performance, maintainability, best-practices).
- Created structured issue generation prompt from GitHub URLs or text descriptions, including clarity detection and optional clarification questions.
- Introduced CCW Loop-B hybrid orchestrator pattern for iterative development, featuring a coordinator and specialized workers with batch wait support.
- Defined state management, session structure, and output schemas for the CCW Loop-B workflow.
- Added error handling and best practices documentation for the new features.
