Replace external inject-spec.py hook with built-in zero-config skill
detection in codeagent-wrapper. The system auto-detects project type
from fingerprint files (go.mod, package.json, etc.), maps to installed
skills, and injects SKILL.md content directly into sub-agent prompts.
Key changes:
- Add DetectProjectSkills/ResolveSkillContent in executor/prompt.go
- Add Skills field to TaskSpec with parallel config parsing
- Add --skills CLI flag for explicit override
- Update /do SKILL.md Phase 4 with per-task skill examples
- Remove on-stop.py global hook (not needed)
- Replace inject-spec.py with no-op (detection now internal)
- Add 20 unit tests covering detection, resolution, budget, security
Security: path traversal protection via validSkillName regex,
16K char budget with tag overhead accounting, CRLF normalization.
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- Add worktree module for git worktree management
- Refactor do skill scripts from shell to Python for better maintainability
- Add install.py for do skill installation
- Update stop-hook to Python implementation
- Enhance executor with additional configuration options
- Update CLAUDE.md with first-principles thinking guidelines
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- Add AllowedTools/DisallowedTools fields to AgentModelConfig and Config
- Update ResolveAgentConfig to return new fields
- Pass --allowedTools/--disallowedTools to claude CLI in buildClaudeArgs
- Add fields to TaskSpec and propagate through executor
- Fix backend selection when taskSpec.Backend is specified but backend=nil
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REMOVED all hardcoded default backend/model values from defaultModelsConfig.
Now ~/.codeagent/models.json is REQUIRED - missing config returns clear error
with example configuration.
BREAKING CHANGE: Users must configure ~/.codeagent/models.json before using
--agent or parallel tasks with agent: field.
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