feat: add implementation_approach command field execution mode

- Add CLI mode example to implementation_approach showing optional command field
- Document two execution modes:
  1. Default Mode (agent execution): No command field, agent interprets steps
  2. CLI Mode (command execution): With command field, uses CLI tools (codex/gemini/qwen)

- Add Implementation Approach Execution Modes section with:
  - Mode descriptions and use cases
  - Required fields for each mode
  - Command patterns for CLI mode (codex, gemini)
  - Mode selection strategy

- Simplify implementation_approach examples to use generic placeholders
- Emphasize command field is optional, agent decides based on task complexity

Benefits:
- Clear documentation of both execution patterns
- Agents understand when to use CLI tools vs direct execution
- Pattern examples show structure without over-specifying content
- Supports both autonomous agent work and CLI tool delegation

🤖 Generated with [Claude Code](https://claude.com/claude-code)

Co-Authored-By: Claude <noreply@anthropic.com>

.claude/agents/action-planning-agent.md

@@ -102,7 +102,7 @@ Phase 2: Document Generation (Autonomous Output)
 1. **Extract Tasks**: Parse `analysis_results.tasks` array
 2. **Map Artifacts**: Use `artifacts_inventory` to add artifact references to task.context
 3. **Assess Complexity**: Use `analysis_results.complexity` for document structure decision
-4. **Session Paths**: Use `session_id` to construct output paths (.workflow/{session_id}/)
+4. **Session Paths**: Use `session_id` to construct output paths (.workflow/active/{session_id}/)
 
 ### MCP Integration Guidelines
 
@@ -137,19 +137,44 @@ Break work into 3-5 logical implementation stages with:
 - Dependencies on previous stages
 - Estimated complexity and time requirements
 
-### 2. Task JSON Generation (5-Field Schema + Artifacts)
+### 2. Task JSON Generation (6-Field Schema + Artifacts)
 Generate individual `.task/IMPL-*.json` files with:
 
-**Required Fields**:
+#### Top-Level Fields
 ```json
 {
   "id": "IMPL-N[.M]",
   "title": "Descriptive task name",
-  "status": "pending",
+  "status": "pending|active|completed|blocked|container",
+  "context_package_path": ".workflow/active/WFS-{session}/.process/context-package.json"
+}
+```
+
+**Field Descriptions**:
+- `id`: Task identifier (format: `IMPL-N` or `IMPL-N.M` for subtasks, max 2 levels)
+- `title`: Descriptive task name summarizing the work
+- `status`: Task state - `pending` (not started), `active` (in progress), `completed` (done), `blocked` (waiting on dependencies), `container` (has subtasks, cannot be executed directly)
+- `context_package_path`: Path to smart context package containing project structure, dependencies, and brainstorming artifacts catalog
+
+#### Meta Object
+```json
+{
   "meta": {
-    "type": "feature|bugfix|refactor|test|docs",
-    "agent": "@code-developer"
-  },
+    "type": "feature|bugfix|refactor|test-gen|test-fix|docs",
+    "agent": "@code-developer|@action-planning-agent|@test-fix-agent|@universal-executor",
+    "execution_group": "parallel-abc123|null"
+  }
+}
+```
+
+**Field Descriptions**:
+- `type`: Task category - `feature` (new functionality), `bugfix` (fix defects), `refactor` (restructure code), `test-gen` (generate tests), `test-fix` (fix failing tests), `docs` (documentation)
+- `agent`: Assigned agent for execution
+- `execution_group`: Parallelization group ID (tasks with same ID can run concurrently) or `null` for sequential tasks
+
+#### Context Object
+```json
+{
   "context": {
     "requirements": [
       "Implement 3 features: [authentication, authorization, session management]",
@@ -162,43 +187,131 @@ Generate individual `.task/IMPL-*.json` files with:
       "5 files created: verify by ls src/auth/*.ts | wc -l = 5",
       "Test coverage >=80%: verify by npm test -- --coverage | grep auth"
     ],
+    "parent": "IMPL-N",
     "depends_on": ["IMPL-N"],
+    "inherited": {
+      "from": "IMPL-N",
+      "context": ["Authentication system design completed", "JWT strategy defined"]
+    },
+    "shared_context": {
+      "tech_stack": ["Node.js", "TypeScript", "Express"],
+      "auth_strategy": "JWT with refresh tokens",
+      "conventions": ["Follow existing auth patterns in src/auth/legacy/"]
+    },
     "artifacts": [
       {
-        "type": "synthesis_specification",
+        "type": "synthesis_specification|topic_framework|individual_role_analysis",
+        "source": "brainstorm_clarification|brainstorm_framework|brainstorm_roles",
         "path": "{from artifacts_inventory}",
-        "priority": "highest"
+        "priority": "highest|high|medium|low",
+        "usage": "Architecture decisions and API specifications",
+        "contains": "role_specific_requirements_and_design"
       }
     ]
-  },
+  }
+}
+```
+
+**Field Descriptions**:
+- `requirements`: **QUANTIFIED** implementation requirements (MUST include explicit counts and enumerated lists, e.g., "5 files: [list]")
+- `focus_paths`: Target directories/files (concrete paths without wildcards)
+- `acceptance`: **MEASURABLE** acceptance criteria (MUST include verification commands, e.g., "verify by ls ... | wc -l = N")
+- `parent`: Parent task ID for subtasks (establishes container/subtask hierarchy)
+- `depends_on`: Prerequisite task IDs that must complete before this task starts
+- `inherited`: Context, patterns, and dependencies passed from parent task
+- `shared_context`: Tech stack, conventions, and architectural strategies for the task
+- `artifacts`: Referenced brainstorming outputs with detailed metadata
+
+#### Flow Control Object
+
+**IMPORTANT**: The `pre_analysis` examples below are **reference templates only**. Agent MUST dynamically select, adapt, and expand steps based on actual task requirements. Apply the principle of **"举一反三"** (draw inferences from examples) - use these patterns as inspiration to create task-specific analysis steps.
+
+**Dynamic Step Selection Guidelines**:
+- **Context Loading**: Always include context package and role analysis loading
+- **Architecture Analysis**: Add module structure analysis for complex projects
+- **Pattern Discovery**: Use CLI tools (gemini/qwen/bash) based on task complexity and available tools
+- **Tech-Specific Analysis**: Add language/framework-specific searches for specialized tasks
+- **MCP Integration**: Utilize MCP tools when available for enhanced context
+
+```json
+{
   "flow_control": {
     "pre_analysis": [
+      // === REQUIRED: Context Package Loading (Always Include) ===
       {
-        "step": "load_synthesis_specification",
-        "commands": ["bash(ls {path} 2>/dev/null)", "Read({path})"],
-        "output_to": "synthesis_specification",
-        "on_error": "skip_optional"
+        "step": "load_context_package",
+        "action": "Load context package for artifact paths and smart context",
+        "commands": ["Read({{context_package_path}})"],
+        "output_to": "context_package",
+        "on_error": "fail"
       },
       {
-        "step": "mcp_codebase_exploration",
-        "command": "mcp__code-index__find_files() && mcp__code-index__search_code_advanced()",
-        "output_to": "codebase_structure"
+        "step": "load_role_analysis_artifacts",
+        "action": "Load role analyses from context-package.json",
+        "commands": [
+          "Read({{context_package_path}})",
+          "Extract(brainstorm_artifacts.role_analyses[].files[].path)",
+          "Read(each extracted path)"
+        ],
+        "output_to": "role_analysis_artifacts",
+        "on_error": "skip_optional"
+      },
+
+      // === OPTIONAL: Select and adapt based on task needs ===
+
+      // Pattern: Project structure analysis
+      {
+        "step": "analyze_project_architecture",
+        "commands": ["bash(~/.claude/scripts/get_modules_by_depth.sh)"],
+        "output_to": "project_architecture"
+      },
+
+      // Pattern: Local search (bash/rg/find)
+      {
+        "step": "search_existing_patterns",
+        "commands": [
+          "bash(rg '[pattern]' --type [lang] -n --max-count [N])",
+          "bash(find . -name '[pattern]' -type f | head -[N])"
+        ],
+        "output_to": "search_results"
+      },
+
+      // Pattern: Gemini CLI deep analysis
+      {
+        "step": "gemini_analyze_[aspect]",
+        "command": "bash(cd [path] && gemini -p 'PURPOSE: [goal]\\nTASK: [tasks]\\nMODE: analysis\\nCONTEXT: @[paths]\\nEXPECTED: [output]\\nRULES: $(cat [template]) | [constraints] | analysis=READ-ONLY')",
+        "output_to": "analysis_result"
+      },
+
+      // Pattern: Qwen CLI analysis (fallback/alternative)
+      {
+        "step": "qwen_analyze_[aspect]",
+        "command": "bash(cd [path] && qwen -p '[similar to gemini pattern]')",
+        "output_to": "analysis_result"
+      },
+
+      // Pattern: MCP tools
+      {
+        "step": "mcp_search_[target]",
+        "command": "mcp__[tool]__[function](parameters)",
+        "output_to": "mcp_results"
       }
     ],
     "implementation_approach": [
+      // === DEFAULT MODE: Agent Execution (no command field) ===
       {
         "step": 1,
         "title": "Load and analyze role analyses",
-        "description": "Load 3 role analysis files and extract quantified requirements",
+        "description": "Load role analysis files and extract quantified requirements",
         "modification_points": [
-          "Load 3 role analysis files: [system-architect/analysis.md, product-manager/analysis.md, ui-designer/analysis.md]",
-          "Extract 15 requirements from role analyses",
-          "Parse 8 architecture decisions from system-architect analysis"
+          "Load N role analysis files: [list]",
+          "Extract M requirements from role analyses",
+          "Parse K architecture decisions"
         ],
         "logic_flow": [
-          "Read 3 role analyses from artifacts inventory",
-          "Parse architecture decisions (8 total)",
-          "Extract implementation requirements (15 total)",
+          "Read role analyses from artifacts inventory",
+          "Parse architecture decisions",
+          "Extract implementation requirements",
           "Build consolidated requirements list"
         ],
         "depends_on": [],
@@ -207,21 +320,33 @@ Generate individual `.task/IMPL-*.json` files with:
       {
         "step": 2,
         "title": "Implement following specification",
-        "description": "Implement 3 features across 5 files following consolidated role analyses",
+        "description": "Implement features following consolidated role analyses",
         "modification_points": [
-          "Create 5 new files in src/auth/: [auth.service.ts (180 lines), auth.controller.ts (120 lines), auth.middleware.ts (60 lines), auth.types.ts (40 lines), auth.test.ts (200 lines)]",
-          "Modify 2 functions: [validateUser() in users.service.ts lines 45-60, hashPassword() in utils.ts lines 120-135]",
-          "Implement 3 core features: [JWT authentication, role-based authorization, session management]"
+          "Create N new files: [list with line counts]",
+          "Modify M functions: [func() in file lines X-Y]",
+          "Implement K core features: [list]"
         ],
         "logic_flow": [
-          "Apply 15 requirements from [synthesis_requirements]",
-          "Implement 3 features across 5 new files (600 total lines)",
-          "Modify 2 existing functions (30 lines total)",
-          "Write 25 test cases covering all features",
-          "Validate against 3 acceptance criteria"
+          "Apply requirements from [synthesis_requirements]",
+          "Implement features across new files",
+          "Modify existing functions",
+          "Write test cases covering all features",
+          "Validate against acceptance criteria"
         ],
         "depends_on": [1],
         "output": "implementation"
+      },
+
+      // === CLI MODE: Command Execution (optional command field) ===
+      {
+        "step": 3,
+        "title": "Execute implementation using CLI tool",
+        "description": "Use Codex/Gemini for complex autonomous execution",
+        "command": "bash(codex -C [path] --full-auto exec '[prompt]' --skip-git-repo-check -s danger-full-access)",
+        "modification_points": ["[Same as default mode]"],
+        "logic_flow": ["[Same as default mode]"],
+        "depends_on": [1, 2],
+        "output": "cli_implementation"
       }
     ],
     "target_files": [
@@ -237,6 +362,72 @@ Generate individual `.task/IMPL-*.json` files with:
 }
 ```
 
+**Field Descriptions**:
+- `pre_analysis`: Context loading and preparation steps (executed sequentially before implementation)
+- `implementation_approach`: Implementation steps with dependency management (array of step objects)
+- `target_files`: Specific files/functions/lines to modify (format: `file:function:lines` for existing, `file` for new)
+
+**Implementation Approach Execution Modes**:
+
+The `implementation_approach` supports **two execution modes** based on the presence of the `command` field:
+
+1. **Default Mode (Agent Execution)** - `command` field **omitted**:
+   - Agent interprets `modification_points` and `logic_flow` autonomously
+   - Direct agent execution with full context awareness
+   - No external tool overhead
+   - **Use for**: Standard implementation tasks where agent capability is sufficient
+   - **Required fields**: `step`, `title`, `description`, `modification_points`, `logic_flow`, `depends_on`, `output`
+
+2. **CLI Mode (Command Execution)** - `command` field **included**:
+   - Specified command executes the step directly
+   - Leverages specialized CLI tools (codex/gemini/qwen) for complex reasoning
+   - **Use for**: Large-scale features, complex refactoring, or when user explicitly requests CLI tool usage
+   - **Required fields**: Same as default mode **PLUS** `command`
+   - **Command patterns**:
+     - `bash(codex -C [path] --full-auto exec '[prompt]' --skip-git-repo-check -s danger-full-access)`
+     - `bash(codex --full-auto exec '[task]' resume --last --skip-git-repo-check -s danger-full-access)` (multi-step)
+     - `bash(cd [path] && gemini -p '[prompt]' --approval-mode yolo)` (write mode)
+
+**Mode Selection Strategy**:
+- **Default to agent execution** for most tasks
+- **Use CLI mode** when:
+  - User explicitly requests CLI tool (codex/gemini/qwen)
+  - Task requires multi-step autonomous reasoning beyond agent capability
+  - Complex refactoring needs specialized tool analysis
+  - Building on previous CLI execution context (use `resume --last`)
+
+**Key Principle**: The `command` field is **optional**. Agent must decide based on task complexity and user preference.
+
+**Pre-Analysis Step Selection Guide (举一反三 Principle)**:
+
+The examples above demonstrate **patterns**, not fixed requirements. Agent MUST:
+
+1. **Always Include** (Required):
+   - `load_context_package` - Essential for all tasks
+   - `load_role_analysis_artifacts` - Critical for accessing brainstorming insights
+
+2. **Selectively Include Based on Task Type**:
+   - **Architecture tasks**: Project structure + Gemini architecture analysis
+   - **Refactoring tasks**: Gemini execution flow tracing + code quality analysis
+   - **Frontend tasks**: React/Vue component searches + UI pattern analysis
+   - **Backend tasks**: Database schema + API endpoint searches
+   - **Security tasks**: Vulnerability scans + security pattern analysis
+   - **Performance tasks**: Bottleneck identification + profiling data
+
+3. **Tool Selection Strategy**:
+   - **Gemini CLI**: Deep analysis (architecture, execution flow, patterns)
+   - **Qwen CLI**: Fallback or code quality analysis
+   - **Bash/rg/find**: Quick pattern matching and file discovery
+   - **MCP tools**: Semantic search and external research
+
+4. **Command Composition Patterns**:
+   - **Single command**: `bash([simple_search])`
+   - **Multiple commands**: `["bash([cmd1])", "bash([cmd2])"]`
+   - **CLI analysis**: `bash(cd [path] && gemini -p '[prompt]')`
+   - **MCP integration**: `mcp__[tool]__[function]([params])`
+
+**Key Principle**: Examples show **structure patterns**, not specific implementations. Agent must create task-appropriate steps dynamically.
+
 **Artifact Mapping**:
 - Use `artifacts_inventory` from context package
 - Highest priority: synthesis_specification
@@ -244,14 +435,14 @@ Generate individual `.task/IMPL-*.json` files with:
 - Low priority: role_analyses
 
 ### 3. Implementation Plan Creation
-Generate `IMPL_PLAN.md` at `.workflow/{session_id}/IMPL_PLAN.md`:
+Generate `IMPL_PLAN.md` at `.workflow/active/{session_id}/IMPL_PLAN.md`:
 
 **Structure**:
 ```markdown
 ---
 identifier: {session_id}
 source: "User requirements"
-analysis: .workflow/{session_id}/.process/ANALYSIS_RESULTS.md
+analysis: .workflow/active/{session_id}/.process/ANALYSIS_RESULTS.md
 ---
 
 # Implementation Plan: {Project Title}
@@ -280,7 +471,7 @@ analysis: .workflow/{session_id}/.process/ANALYSIS_RESULTS.md
 ```
 
 ### 4. TODO List Generation
-Generate `TODO_LIST.md` at `.workflow/{session_id}/TODO_LIST.md`:
+Generate `TODO_LIST.md` at `.workflow/active/{session_id}/TODO_LIST.md`:
 
 **Structure**:
 ```markdown

.claude/agents/cli-execution-agent.md

@@ -190,11 +190,11 @@ cd src/auth && gemini -p "CONTEXT: @**/* @../shared/**/*" --include-directories
 
 **Session Detection**:
 ```bash
-find .workflow/ -name '.active-*' -type f
+find .workflow/active/ -name 'WFS-*' -type d
 ```
 
 **Output Paths**:
-- **With session**: `.workflow/WFS-{id}/.chat/{agent}-{timestamp}.md`
+- **With session**: `.workflow/active/WFS-{id}/.chat/{agent}-{timestamp}.md`
 - **No session**: `.workflow/.scratchpad/{agent}-{description}-{timestamp}.md`
 
 **Log Structure**:

.claude/agents/cli-explore-agent.md

@@ -618,52 +618,3 @@ rg "^import .*;" --type java -n
 # Find test files
 find . -name "*Test.java" -o -name "*Tests.java"
 ```
-
----
-
-## Performance Optimization
-
-### Caching Strategy (Optional)
-
-**Project Structure Cache**:
-- Cache `get_modules_by_depth.sh` output for 1 hour
-- Invalidate on file system changes (watch .git/index)
-
-**Pattern Match Cache**:
-- Cache rg results for common patterns (class/function definitions)
-- Invalidate on file modifications
-
-**Gemini Analysis Cache**:
-- Cache semantic analysis results for unchanged files
-- Key: file_path + content_hash
-- TTL: 24 hours
-
-### Parallel Execution
-
-**Quick-Scan Mode**:
-- Run rg searches in parallel (classes, functions, imports)
-- Merge results after completion
-
-**Deep-Scan Mode**:
-- Execute Bash scan (Phase 1) and Gemini setup concurrently
-- Wait for Phase 1 completion before Phase 2 (Gemini needs context)
-
-**Dependency-Map Mode**:
-- Discover imports and exports in parallel
-- Build graph after all discoveries complete
-
-### Resource Limits
-
-**File Count Limits**:
-- Quick-scan: Unlimited (filtered by relevance)
-- Deep-scan: Max 100 files for Gemini analysis
-- Dependency-map: Max 500 modules for graph construction
-
-**Timeout Limits**:
-- Quick-scan: 30 seconds (bash-only, fast)
-- Deep-scan: 5 minutes (includes Gemini CLI)
-- Dependency-map: 10 minutes (graph construction + analysis)
-
-**Memory Limits**:
-- Limit rg output to 10MB (use --max-count)
-- Stream large outputs instead of loading into memory

.claude/agents/cli-planning-agent.md

@@ -98,7 +98,7 @@ Phase 3: Task JSON Generation
 1. Load task JSON template
 2. Populate template with parsed CLI results
 3. Add iteration context and previous attempts
-4. Write task JSON to .workflow/{session}/.task/IMPL-fix-N.json
+4. Write task JSON to .workflow/session/{session}/.task/IMPL-fix-N.json
 5. Return success status and task ID to orchestrator
 ```
 

.claude/agents/context-search-agent.md

@@ -102,6 +102,8 @@ if (!memory.has("README.md")) Read(README.md)
 
 Execute all 3 tracks in parallel for comprehensive coverage.
 
+**Note**: Historical archive analysis (querying `.workflow/archives/manifest.json`) is optional and should be performed if the manifest exists. Inject findings into `conflict_detection.historical_conflicts[]`.
+
 #### Track 1: Reference Documentation
 
 Extract from Phase 0 loaded docs:
@@ -238,7 +240,7 @@ const context = {
 
 **3.5 Brainstorm Artifacts Integration**
 
-If `.workflow/{session}/.brainstorming/` exists, read and include content:
+If `.workflow/session/{session}/.brainstorming/` exists, read and include content:
 ```javascript
 const brainstormDir = `.workflow/${session}/.brainstorming`;
 if (dir_exists(brainstormDir)) {
@@ -274,7 +276,7 @@ Calculate risk level based on:
 
 **3.7 Context Packaging & Output**
 
-**Output**: `.workflow/{session-id}/.process/context-package.json`
+**Output**: `.workflow/active//{session-id}/.process/context-package.json`
 
 **Note**: Task JSONs reference via `context_package_path` field (not in `artifacts`)
 
@@ -422,7 +424,7 @@ Calculate risk level based on:
 ## Quality Validation
 
 Before completion verify:
-- [ ] context-package.json in `.workflow/{session}/.process/`
+- [ ] context-package.json in `.workflow/session/{session}/.process/`
 - [ ] Valid JSON with all required fields
 - [ ] Metadata complete (description, keywords, complexity)
 - [ ] Project context documented (patterns, conventions, tech stack)
@@ -432,25 +434,6 @@ Before completion verify:
 - [ ] File relevance >80%
 - [ ] No sensitive data exposed
 
-## Performance Limits
-
-**File Counts**:
-- Max 30 high-priority (score >0.8)
-- Max 20 medium-priority (score 0.5-0.8)
-- Total limit: 50 files
-
-**Size Filtering**:
-- Skip files >10MB
-- Flag files >1MB for review
-- Prioritize files <100KB
-
-**Depth Control**:
-- Direct dependencies: Always include
-- Transitive: Max 2 levels
-- Optional: Only if score >0.7
-
-**Tool Priority**: Code-Index > ripgrep > find > grep
-
 ## Output Report
 
 ```
@@ -475,7 +458,7 @@ Conflict Detection:
 - Affected: {modules}
 - Mitigation: {strategy}
 
-Output: .workflow/{session}/.process/context-package.json
+Output: .workflow/session/{session}/.process/context-package.json
 (Referenced in task JSONs via top-level `context_package_path` field)
 ```
 

.claude/agents/test-context-search-agent.md

@@ -304,7 +304,7 @@ if (!validation.all_passed()) {
 ## Output Location
 
 ```
-.workflow/{test_session_id}/.process/test-context-package.json
+.workflow/active/{test_session_id}/.process/test-context-package.json
 ```
 
 ## Helper Functions Reference

.claude/commands/cli/analyze.md

@@ -75,7 +75,7 @@ Task(
     4. Execution & Output:
        - Execute CLI tool with assembled context
        - Generate comprehensive analysis report
-       - Save to .workflow/WFS-[id]/.chat/analyze-[timestamp].md (or .scratchpad/)
+       - Save to .workflow/active/WFS-[id]/.chat/analyze-[timestamp].md (or .scratchpad/)
   `
 )
 ```
@@ -84,4 +84,4 @@ Task(
 
 - **Read-only**: Analyzes code, does NOT modify files
 - **Auto-pattern**: Detects file patterns from keywords (auth→auth files, component→components, API→api/routes, test→test files)
-- **Output**: `.workflow/WFS-[id]/.chat/analyze-[timestamp].md` (or `.scratchpad/` if no session)
+- **Output**: `.workflow/active/WFS-[id]/.chat/analyze-[timestamp].md` (or `.scratchpad/` if no session)

.claude/commands/cli/chat.md

@@ -70,7 +70,7 @@ Task(
     3. Execution & Output:
        - Execute CLI tool with assembled context
        - Validate answer completeness
-       - Save to .workflow/WFS-[id]/.chat/chat-[timestamp].md (or .scratchpad/)
+       - Save to .workflow/active/WFS-[id]/.chat/chat-[timestamp].md (or .scratchpad/)
   `
 )
 ```
@@ -79,4 +79,4 @@ Task(
 
 - **Read-only**: Provides answers, does NOT modify code
 - **Context**: `@CLAUDE.md` + inferred or all files (`@**/*`)
-- **Output**: `.workflow/WFS-[id]/.chat/chat-[timestamp].md` (or `.scratchpad/` if no session)
+- **Output**: `.workflow/active/WFS-[id]/.chat/chat-[timestamp].md` (or `.scratchpad/` if no session)

.claude/commands/cli/codex-execute.md

@@ -468,9 +468,9 @@ Summary: [file references, changes, next steps]
 
 **Execution Log Destination**:
 - **IF** active workflow session exists:
-  - Execution log: `.workflow/WFS-[id]/.chat/codex-execute-[timestamp].md`
-  - Task summaries: `.workflow/WFS-[id]/.summaries/[TASK-ID]-summary.md` (if task ID)
-  - Task updates: `.workflow/WFS-[id]/.task/[TASK-ID].json` status updates
+  - Execution log: `.workflow/active/WFS-[id]/.chat/codex-execute-[timestamp].md`
+  - Task summaries: `.workflow/active/WFS-[id]/.summaries/[TASK-ID]-summary.md` (if task ID)
+  - Task updates: `.workflow/active/WFS-[id]/.task/[TASK-ID].json` status updates
   - TodoWrite tracking: Embedded in execution log
 - **ELSE** (no active session):
   - **Recommended**: Create workflow session first (`/workflow:session:start`)
@@ -478,7 +478,7 @@ Summary: [file references, changes, next steps]
 
 **Output Files** (during execution):
 ```
-.workflow/WFS-[session-id]/
+.workflow/active/WFS-[session-id]/
 ├── .chat/
 │   └── codex-execute-20250105-143022.md    # Full execution log with task flow
 ├── .summaries/
@@ -492,9 +492,9 @@ Summary: [file references, changes, next steps]
 
 **Examples**:
 - During session `WFS-auth-system`, executing multi-stage auth implementation:
-  - Log: `.workflow/WFS-auth-system/.chat/codex-execute-20250105-143022.md`
-  - Summaries: `.workflow/WFS-auth-system/.summaries/IMPL-001.{1,2,3}-summary.md`
-  - Task status: `.workflow/WFS-auth-system/.task/IMPL-001.json` (status: completed)
+  - Log: `.workflow/active/WFS-auth-system/.chat/codex-execute-20250105-143022.md`
+  - Summaries: `.workflow/active/WFS-auth-system/.summaries/IMPL-001.{1,2,3}-summary.md`
+  - Task status: `.workflow/active/WFS-auth-system/.task/IMPL-001.json` (status: completed)
 - No session, ad-hoc multi-stage task:
   - Log: `.workflow/.scratchpad/codex-execute-auth-refactor-20250105-143045.md`
 

.claude/commands/cli/discuss-plan.md

@@ -167,9 +167,9 @@ TodoWrite({
 ## Output Routing
 
 -   **Primary Log**: Entire multi-round discussion logged to single file:
-    -   `.workflow/WFS-[id]/.chat/discuss-plan-[topic]-[timestamp].md`
+    -   `.workflow/active/WFS-[id]/.chat/discuss-plan-[topic]-[timestamp].md`
 -   **Final Plan**: Clean final version saved upon conclusion:
-    -   `.workflow/WFS-[id]/.summaries/plan-[topic].md`
+    -   `.workflow/active/WFS-[id]/.summaries/plan-[topic].md`
 -   **Scratchpad**: If no session active:
     -   `.workflow/.scratchpad/discuss-plan-[topic]-[timestamp].md`
 

.claude/commands/cli/execute.md

@@ -76,8 +76,8 @@ Use `resume --last` when current task extends/relates to previous execution. See
 
 ## Workflow Integration
 
-**Session Management**: Auto-detects `.workflow/.active-*` marker
-- Active session: Save to `.workflow/WFS-[id]/.chat/execute-[timestamp].md`
+**Session Management**: Auto-detects active session from `.workflow/active/` directory
+- Active session: Save to `.workflow/active/WFS-[id]/.chat/execute-[timestamp].md`
 - No session: Create new session or save to scratchpad
 
 **Task Integration**: Load from `.task/[TASK-ID].json`, update status, generate summary
@@ -127,8 +127,8 @@ Task(
        - Ensure working implementation with proper error handling
 
     5. Output & Documentation:
-       - Save execution log: .workflow/WFS-[id]/.chat/execute-[timestamp].md
-       ${task_id ? '- Generate task summary: .workflow/WFS-[id]/.summaries/' + task_id + '-summary.md' : ''}
+       - Save execution log: .workflow/active/WFS-[id]/.chat/execute-[timestamp].md
+       ${task_id ? '- Generate task summary: .workflow/active/WFS-[id]/.summaries/' + task_id + '-summary.md' : ''}
        ${task_id ? '- Update task status in .task/' + task_id + '.json' : ''}
        - Document all code changes made
 
@@ -137,7 +137,7 @@ Task(
 )
 ```
 
-**Output**: `.workflow/WFS-[id]/.chat/execute-[timestamp].md` + `.summaries/[TASK-ID]-summary.md` (or `.scratchpad/` if no session)
+**Output**: `.workflow/active/WFS-[id]/.chat/execute-[timestamp].md` + `.workflow/active/WFS-[id]/.summaries/[TASK-ID]-summary.md` (or `.scratchpad/` if no session)
 
 ## Examples
 

.claude/commands/cli/mode/bug-diagnosis.md

@@ -84,7 +84,7 @@ Task(
        - Root cause diagnosis with evidence
        - Fix suggestions and recommendations
        - Prevention strategies
-       - Save to .workflow/WFS-[id]/.chat/bug-diagnosis-[timestamp].md (or .scratchpad/)
+       - Save to .workflow/active/WFS-[id]/.chat/bug-diagnosis-[timestamp].md (or .scratchpad/)
   `
 )
 ```
@@ -93,4 +93,4 @@ Task(
 
 - **Read-only**: Diagnoses bugs, does NOT modify code
 - **Template**: `~/.claude/workflows/cli-templates/prompts/analysis/01-diagnose-bug-root-cause.txt`
-- **Output**: `.workflow/WFS-[id]/.chat/bug-diagnosis-[timestamp].md` (or `.scratchpad/` if no session)
+- **Output**: `.workflow/active/WFS-[id]/.chat/bug-diagnosis-[timestamp].md` (or `.scratchpad/` if no session)

.claude/commands/cli/mode/code-analysis.md

@@ -86,7 +86,7 @@ Task(
        - Execution trace documentation
        - Call flow analysis with diagrams
        - Performance and optimization insights
-       - Save to .workflow/WFS-[id]/.chat/code-analysis-[timestamp].md (or .scratchpad/)
+       - Save to .workflow/active/WFS-[id]/.chat/code-analysis-[timestamp].md (or .scratchpad/)
   `
 )
 ```
@@ -95,4 +95,4 @@ Task(
 
 - **Read-only**: Analyzes code, does NOT modify files
 - **Template**: `~/.claude/workflows/cli-templates/prompts/analysis/01-trace-code-execution.txt`
-- **Output**: `.workflow/WFS-[id]/.chat/code-analysis-[timestamp].md` (or `.scratchpad/` if no session)
+- **Output**: `.workflow/active/WFS-[id]/.chat/code-analysis-[timestamp].md` (or `.scratchpad/` if no session)

.claude/commands/cli/mode/document-analysis.md

@@ -0,0 +1,126 @@
+---
+name: document-analysis
+description: Read-only technical document/paper analysis using Gemini/Qwen/Codex with systematic comprehension template for insights extraction
+argument-hint: "[--tool codex|gemini|qwen] [--enhance] [--cd path] document path or topic"
+allowed-tools: SlashCommand(*), Bash(*), Task(*), Read(*)
+---
+
+# CLI Mode: Document Analysis (/cli:mode:document-analysis)
+
+## Purpose
+
+Systematic analysis of technical documents, research papers, API documentation, and technical specifications.
+
+**Tool Selection**:
+- **gemini** (default) - Best for document comprehension and structure analysis
+- **qwen** - Fallback when Gemini unavailable
+- **codex** - Alternative for complex technical documents
+
+**Key Feature**: `--cd` flag for directory-scoped document discovery
+
+## Parameters
+
+- `--tool <gemini|qwen|codex>` - Tool selection (default: gemini)
+- `--enhance` - Enhance analysis target with `/enhance-prompt`
+- `--cd "path"` - Target directory for document search
+- `<document-path-or-topic>` (Required) - File path or topic description
+
+## Tool Usage
+
+**Gemini** (Primary):
+```bash
+/cli:mode:document-analysis "README.md"
+/cli:mode:document-analysis --tool gemini "analyze API documentation"
+```
+
+**Qwen** (Fallback):
+```bash
+/cli:mode:document-analysis --tool qwen "docs/architecture.md"
+```
+
+**Codex** (Alternative):
+```bash
+/cli:mode:document-analysis --tool codex "research paper in docs/"
+```
+
+## Execution Flow
+
+Uses **cli-execution-agent** for automated document analysis:
+
+```javascript
+Task(
+  subagent_type="cli-execution-agent",
+  description="Systematic document comprehension and insights extraction",
+  prompt=`
+    Task: ${document_path_or_topic}
+    Mode: document-analysis
+    Tool: ${tool_flag || 'gemini'}
+    Directory: ${cd_path || '.'}
+    Enhance: ${enhance_flag}
+    Template: ~/.claude/workflows/cli-templates/prompts/analysis/02-analyze-technical-document.txt
+
+    Execute systematic document analysis:
+
+    1. Document Discovery:
+       - Locate target document(s) via path or topic keywords
+       - Identify document type (README, API docs, research paper, spec, tutorial)
+       - Detect document format (Markdown, PDF, plain text, reStructuredText)
+       - Discover related documents (references, appendices, examples)
+       - Use MCP/ripgrep for comprehensive file discovery
+
+    2. Pre-Analysis Planning (Required):
+       - Determine document structure (sections, hierarchy, flow)
+       - Identify key components (abstract, methodology, implementation details)
+       - Map dependencies and cross-references
+       - Assess document scope and complexity
+       - Plan analysis approach based on document type
+
+    3. CLI Command Construction:
+       - Tool: ${tool_flag || 'gemini'} (qwen fallback, codex for complex docs)
+       - Directory: cd ${cd_path || '.'} &&
+       - Context: @{document_paths} + @CLAUDE.md + related files
+       - Mode: analysis (read-only)
+       - Template: analysis/02-analyze-technical-document.txt
+
+    4. Analysis Execution:
+       - Apply 6-field template structure (PURPOSE, TASK, MODE, CONTEXT, EXPECTED, RULES)
+       - Execute multi-phase analysis protocol with pre-planning
+       - Perform self-critique before final output
+       - Generate structured report with evidence-based insights
+
+    5. Output Generation:
+       - Comprehensive document analysis report
+       - Structured insights with section references
+       - Critical assessment with evidence
+       - Actionable recommendations
+       - Save to .workflow/active/WFS-[id]/.chat/doc-analysis-[timestamp].md (or .scratchpad/)
+  `
+)
+```
+
+## Core Rules
+
+- **Read-only**: Analyzes documents, does NOT modify files
+- **Evidence-based**: All claims must reference specific sections/pages
+- **Pre-planning**: Requires analysis approach planning before execution
+- **Precise language**: Direct, accurate wording - no persuasive embellishment
+- **Output**: `.workflow/active/WFS-[id]/.chat/doc-analysis-[timestamp].md` (or `.scratchpad/` if no session)
+
+## Document Types Supported
+
+| Type | Focus Areas | Key Outputs |
+|------|-------------|-------------|
+| README | Purpose, setup, usage | Integration steps, quick-start guide |
+| API Documentation | Endpoints, parameters, responses | API usage patterns, integration points |
+| Research Paper | Methodology, findings, validity | Applicable techniques, implementation feasibility |
+| Specification | Requirements, standards, constraints | Compliance checklist, implementation requirements |
+| Tutorial | Learning path, examples, exercises | Key concepts, practical applications |
+| Architecture Docs | System design, components, patterns | Design decisions, integration points, trade-offs |
+
+## Best Practices
+
+1. **Scope Definition**: Clearly define what aspects to analyze before starting
+2. **Layered Reading**: Structure/Overview → Details → Critical Analysis → Synthesis
+3. **Evidence Trail**: Track section references for all extracted information
+4. **Gap Identification**: Note missing information or unclear sections explicitly
+5. **Actionable Output**: Focus on insights that inform decisions or actions

.claude/commands/cli/mode/plan.md

@@ -81,7 +81,7 @@ Task(
        - Strategic modification plan
        - Impact analysis and risk assessment
        - Implementation roadmap
-       - Save to .workflow/WFS-[id]/.chat/plan-[timestamp].md (or .scratchpad/)
+       - Save to .workflow/active/WFS-[id]/.chat/plan-[timestamp].md (or .scratchpad/)
   `
 )
 ```
@@ -90,4 +90,4 @@ Task(
 
 - **Read-only**: Creates modification plans, does NOT generate code
 - **Template**: `~/.claude/workflows/cli-templates/prompts/planning/01-plan-architecture-design.txt`
-- **Output**: `.workflow/WFS-[id]/.chat/plan-[timestamp].md` (or `.scratchpad/` if no session)
+- **Output**: `.workflow/active/WFS-[id]/.chat/plan-[timestamp].md` (or `.scratchpad/` if no session)

.claude/commands/memory/docs-full-cli.md

@@ -0,0 +1,472 @@
+---
+name: docs-full-cli
+description: Generate full project documentation using CLI execution (Layer 3→1) with batched agents (4 modules/agent) and gemini→qwen→codex fallback, <20 modules uses direct parallel
+argument-hint: "[path] [--tool <gemini|qwen|codex>]"
+---
+
+# Full Documentation Generation - CLI Mode (/memory:docs-full-cli)
+
+## Overview
+
+Orchestrates project-wide documentation generation using CLI-based execution with batched agents and automatic tool fallback.
+
+**Parameters**:
+- `path`: Target directory (default: current directory)
+- `--tool <gemini|qwen|codex>`: Primary tool (default: gemini)
+
+**Execution Flow**: Discovery → Plan Presentation → Execution → Verification
+
+## 3-Layer Architecture & Auto-Strategy Selection
+
+### Layer Definition & Strategy Assignment
+
+| Layer | Depth | Strategy | Purpose | Context Pattern |
+|-------|-------|----------|---------|----------------|
+| **Layer 3** (Deepest) | ≥3 | `full` | Generate docs for all subdirectories with code | `@**/*` (all files) |
+| **Layer 2** (Middle) | 1-2 | `single` | Current dir + child docs | `@*/API.md @*/README.md @*.{ts,tsx,js,...}` |
+| **Layer 1** (Top) | 0 | `single` | Current dir + child docs | `@*/API.md @*/README.md @*.{ts,tsx,js,...}` |
+
+**Generation Direction**: Layer 3 → Layer 2 → Layer 1 (bottom-up dependency flow)
+
+**Strategy Auto-Selection**: Strategies are automatically determined by directory depth - no user configuration needed.
+
+### Strategy Details
+
+#### Full Strategy (Layer 3 Only)
+- **Use Case**: Deepest directories with comprehensive file coverage
+- **Behavior**: Generates API.md + README.md for current directory AND subdirectories containing code
+- **Context**: All files in current directory tree (`@**/*`)
+- **Output**: `.workflow/docs/{project_name}/{path}/API.md` + `README.md`
+- **Benefits**: Creates foundation documentation for upper layers to reference
+
+#### Single Strategy (Layers 1-2)
+- **Use Case**: Upper layers that aggregate from existing documentation
+- **Behavior**: Generates API.md + README.md only in current directory
+- **Context**: Direct children docs + current directory code files
+- **Output**: `.workflow/docs/{project_name}/{path}/API.md` + `README.md`
+- **Benefits**: Minimal context consumption, clear layer separation
+
+### Example Flow
+```
+src/auth/handlers/ (depth 3) → FULL STRATEGY
+  CONTEXT: @**/* (all files in handlers/ and subdirs)
+  GENERATES: .workflow/docs/project/src/auth/handlers/{API.md,README.md} + subdirs
+  ↓
+src/auth/ (depth 2) → SINGLE STRATEGY
+  CONTEXT: @*/API.md @*/README.md @*.ts (handlers docs + current code)
+  GENERATES: .workflow/docs/project/src/auth/{API.md,README.md} only
+  ↓
+src/ (depth 1) → SINGLE STRATEGY
+  CONTEXT: @*/API.md @*/README.md (auth docs, utils docs)
+  GENERATES: .workflow/docs/project/src/{API.md,README.md} only
+  ↓
+./ (depth 0) → SINGLE STRATEGY
+  CONTEXT: @*/API.md @*/README.md (src docs, tests docs)
+  GENERATES: .workflow/docs/project/{API.md,README.md} only
+```
+
+## Core Execution Rules
+
+1. **Analyze First**: Module discovery + folder classification before generation
+2. **Wait for Approval**: Present plan, no execution without user confirmation
+3. **Execution Strategy**:
+   - **<20 modules**: Direct parallel execution (max 4 concurrent per layer)
+   - **≥20 modules**: Agent batch processing (4 modules/agent, 73% overhead reduction)
+4. **Tool Fallback**: Auto-retry with fallback tools on failure
+5. **Layer Sequential**: Process layers 3→2→1 (bottom-up), parallel batches within layer
+6. **Safety Check**: Verify only docs files modified in .workflow/docs/
+7. **Layer-based Grouping**: Group modules by LAYER (not depth) for execution
+
+## Tool Fallback Hierarchy
+
+```javascript
+--tool gemini  →  [gemini, qwen, codex]  // default
+--tool qwen    →  [qwen, gemini, codex]
+--tool codex   →  [codex, gemini, qwen]
+```
+
+**Trigger**: Non-zero exit code from generation script
+
+| Tool   | Best For                       | Fallback To    |
+|--------|--------------------------------|----------------|
+| gemini | Documentation, patterns        | qwen → codex   |
+| qwen   | Architecture, system design    | gemini → codex |
+| codex  | Implementation, code quality   | gemini → qwen  |
+
+## Execution Phases
+
+### Phase 1: Discovery & Analysis
+
+```javascript
+// Get project metadata
+Bash({command: "pwd && basename \"$(pwd)\" && git rev-parse --show-toplevel 2>/dev/null || pwd", run_in_background: false});
+
+// Get module structure with classification
+Bash({command: "~/.claude/scripts/get_modules_by_depth.sh list | ~/.claude/scripts/classify-folders.sh", run_in_background: false});
+
+// OR with path parameter
+Bash({command: "cd <target-path> && ~/.claude/scripts/get_modules_by_depth.sh list | ~/.claude/scripts/classify-folders.sh", run_in_background: false});
+```
+
+**Parse output** `depth:N|path:<PATH>|type:<code|navigation>|...` to extract module paths, types, and count.
+
+**Smart filter**: Auto-detect and skip tests/build/config/vendor based on project tech stack.
+
+### Phase 2: Plan Presentation
+
+**For <20 modules**:
+```
+Documentation Generation Plan:
+  Tool: gemini (fallback: qwen → codex)
+  Total: 7 modules
+  Execution: Direct parallel (< 20 modules threshold)
+  Project: myproject
+  Output: .workflow/docs/myproject/
+
+  Will generate docs for:
+  - ./core/interfaces (12 files, type: code) - depth 2 [Layer 2] - single strategy
+  - ./core (22 files, type: code) - depth 1 [Layer 2] - single strategy
+  - ./models (9 files, type: code) - depth 1 [Layer 2] - single strategy
+  - ./utils (12 files, type: navigation) - depth 1 [Layer 2] - single strategy
+  - . (5 files, type: code) - depth 0 [Layer 1] - single strategy
+
+  Documentation Strategy (Auto-Selected):
+  - Layer 2 (depth 1-2): API.md + README.md (current dir only, reference child docs)
+  - Layer 1 (depth 0): API.md + README.md (current dir only, reference child docs)
+
+  Output Structure:
+  - Code folders: API.md + README.md
+  - Navigation folders: README.md only
+
+  Auto-skipped: ./tests, __pycache__, node_modules (15 paths)
+  Execution order: Layer 2 → Layer 1
+  Estimated time: ~5-10 minutes
+
+  Confirm execution? (y/n)
+```
+
+**For ≥20 modules**:
+```
+Documentation Generation Plan:
+  Tool: gemini (fallback: qwen → codex)
+  Total: 31 modules
+  Execution: Agent batch processing (4 modules/agent)
+  Project: myproject
+  Output: .workflow/docs/myproject/
+
+  Will generate docs for:
+  - ./src/features/auth (12 files, type: code) - depth 3 [Layer 3] - full strategy
+  - ./.claude/commands/cli (6 files, type: code) - depth 3 [Layer 3] - full strategy
+  - ./src/utils (8 files, type: code) - depth 2 [Layer 2] - single strategy
+  ...
+
+  Documentation Strategy (Auto-Selected):
+  - Layer 3 (depth ≥3): API.md + README.md (all subdirs with code)
+  - Layer 2 (depth 1-2): API.md + README.md (current dir only)
+  - Layer 1 (depth 0): API.md + README.md (current dir only)
+
+  Output Structure:
+  - Code folders: API.md + README.md
+  - Navigation folders: README.md only
+
+  Auto-skipped: ./tests, __pycache__, node_modules (15 paths)
+  Execution order: Layer 3 → Layer 2 → Layer 1
+
+  Agent allocation (by LAYER):
+  - Layer 3 (14 modules, depth ≥3): 4 agents [4, 4, 4, 2]
+  - Layer 2 (15 modules, depth 1-2): 4 agents [4, 4, 4, 3]
+  - Layer 1 (2 modules, depth 0): 1 agent [2]
+
+  Estimated time: ~15-25 minutes
+
+  Confirm execution? (y/n)
+```
+
+### Phase 3A: Direct Execution (<20 modules)
+
+**Strategy**: Parallel execution within layer (max 4 concurrent), no agent overhead.
+
+**CRITICAL**: All Bash commands use `run_in_background: false` for synchronous execution.
+
+```javascript
+let project_name = detect_project_name();
+
+for (let layer of [3, 2, 1]) {
+  if (modules_by_layer[layer].length === 0) continue;
+  let batches = batch_modules(modules_by_layer[layer], 4);
+
+  for (let batch of batches) {
+    let parallel_tasks = batch.map(module => {
+      return async () => {
+        let strategy = module.depth >= 3 ? "full" : "single";
+        for (let tool of tool_order) {
+          Bash({
+            command: `cd ${module.path} && ~/.claude/scripts/generate_module_docs.sh "${strategy}" "." "${project_name}" "${tool}"`,
+            run_in_background: false
+          });
+          if (bash_result.exit_code === 0) {
+            report(`✅ ${module.path} (Layer ${layer}) docs generated with ${tool}`);
+            return true;
+          }
+        }
+        report(`❌ FAILED: ${module.path} (Layer ${layer}) failed all tools`);
+        return false;
+      };
+    });
+    await Promise.all(parallel_tasks.map(task => task()));
+  }
+}
+```
+
+### Phase 3B: Agent Batch Execution (≥20 modules)
+
+**Strategy**: Batch modules into groups of 4, spawn memory-bridge agents per batch.
+
+```javascript
+// Group modules by LAYER and batch within each layer
+let modules_by_layer = group_by_layer(module_list);
+let tool_order = construct_tool_order(primary_tool);
+let project_name = detect_project_name();
+
+for (let layer of [3, 2, 1]) {
+  if (modules_by_layer[layer].length === 0) continue;
+
+  let batches = batch_modules(modules_by_layer[layer], 4);
+  let worker_tasks = [];
+
+  for (let batch of batches) {
+    worker_tasks.push(
+      Task(
+        subagent_type="memory-bridge",
+        description=`Generate docs for ${batch.length} modules in Layer ${layer}`,
+        prompt=generate_batch_worker_prompt(batch, tool_order, layer, project_name)
+      )
+    );
+  }
+
+  await parallel_execute(worker_tasks);
+}
+```
+
+**Batch Worker Prompt Template**:
+```
+PURPOSE: Generate documentation for assigned modules with tool fallback
+
+TASK: Generate API.md + README.md for assigned modules using specified strategies.
+
+PROJECT: {{project_name}}
+OUTPUT: .workflow/docs/{{project_name}}/
+
+MODULES:
+{{module_path_1}} (strategy: {{strategy_1}}, type: {{folder_type_1}})
+{{module_path_2}} (strategy: {{strategy_2}}, type: {{folder_type_2}})
+...
+
+TOOLS (try in order): {{tool_1}}, {{tool_2}}, {{tool_3}}
+
+EXECUTION SCRIPT: ~/.claude/scripts/generate_module_docs.sh
+  - Accepts strategy parameter: full | single
+  - Accepts folder type detection: code | navigation
+  - Tool execution via direct CLI commands (gemini/qwen/codex)
+  - Output path: .workflow/docs/{{project_name}}/{module_path}/
+
+EXECUTION FLOW (for each module):
+  1. Tool fallback loop (exit on first success):
+     for tool in {{tool_1}} {{tool_2}} {{tool_3}}; do
+       Bash({
+         command: `cd "{{module_path}}" && ~/.claude/scripts/generate_module_docs.sh "{{strategy}}" "." "{{project_name}}" "${tool}"`,
+         run_in_background: false
+       })
+       exit_code=$?
+
+       if [ $exit_code -eq 0 ]; then
+         report "✅ {{module_path}} docs generated with $tool"
+         break
+       else
+         report "⚠️  {{module_path}} failed with $tool, trying next..."
+         continue
+       fi
+     done
+
+  2. Handle complete failure (all tools failed):
+     if [ $exit_code -ne 0 ]; then
+       report "❌ FAILED: {{module_path}} - all tools exhausted"
+       # Continue to next module (do not abort batch)
+     fi
+
+FOLDER TYPE HANDLING:
+  - code: Generate API.md + README.md
+  - navigation: Generate README.md only
+
+FAILURE HANDLING:
+  - Module-level isolation: One module's failure does not affect others
+  - Exit code detection: Non-zero exit code triggers next tool
+  - Exhaustion reporting: Log modules where all tools failed
+  - Batch continuation: Always process remaining modules
+
+REPORTING FORMAT:
+  Per-module status:
+    ✅ path/to/module docs generated with {tool}
+    ⚠️  path/to/module failed with {tool}, trying next...
+    ❌ FAILED: path/to/module - all tools exhausted
+```
+
+### Phase 4: Project-Level Documentation
+
+**After all module documentation is generated, create project-level documentation files.**
+
+```javascript
+let project_name = detect_project_name();
+let project_root = get_project_root();
+
+// Step 1: Generate Project README
+report("Generating project README.md...");
+for (let tool of tool_order) {
+  Bash({
+    command: `cd ${project_root} && ~/.claude/scripts/generate_module_docs.sh "project-readme" "." "${project_name}" "${tool}"`,
+    run_in_background: false
+  });
+  if (bash_result.exit_code === 0) {
+    report(`✅ Project README generated with ${tool}`);
+    break;
+  }
+}
+
+// Step 2: Generate Architecture & Examples
+report("Generating ARCHITECTURE.md and EXAMPLES.md...");
+for (let tool of tool_order) {
+  Bash({
+    command: `cd ${project_root} && ~/.claude/scripts/generate_module_docs.sh "project-architecture" "." "${project_name}" "${tool}"`,
+    run_in_background: false
+  });
+  if (bash_result.exit_code === 0) {
+    report(`✅ Architecture docs generated with ${tool}`);
+    break;
+  }
+}
+
+// Step 3: Generate HTTP API documentation (if API routes detected)
+Bash({command: 'rg "router\\.|@Get|@Post" -g "*.{ts,js,py}" 2>/dev/null && echo "API_FOUND" || echo "NO_API"', run_in_background: false});
+if (bash_result.stdout.includes("API_FOUND")) {
+  report("Generating HTTP API documentation...");
+  for (let tool of tool_order) {
+    Bash({
+      command: `cd ${project_root} && ~/.claude/scripts/generate_module_docs.sh "http-api" "." "${project_name}" "${tool}"`,
+      run_in_background: false
+    });
+    if (bash_result.exit_code === 0) {
+      report(`✅ HTTP API docs generated with ${tool}`);
+      break;
+    }
+  }
+}
+```
+
+**Expected Output**:
+```
+Project-Level Documentation:
+  ✅ README.md (project root overview)
+  ✅ ARCHITECTURE.md (system design)
+  ✅ EXAMPLES.md (usage examples)
+  ✅ api/README.md (HTTP API reference) [optional]
+```
+
+### Phase 5: Verification
+
+```javascript
+// Check documentation files created
+Bash({command: 'find .workflow/docs -type f -name "*.md" 2>/dev/null | wc -l', run_in_background: false});
+
+// Display structure
+Bash({command: 'tree -L 3 .workflow/docs/', run_in_background: false});
+```
+
+**Result Summary**:
+```
+Documentation Generation Summary:
+  Total: 31 | Success: 29 | Failed: 2
+  Tool usage: gemini: 25, qwen: 4, codex: 0
+  Failed: path1, path2
+
+  Generated documentation:
+    .workflow/docs/myproject/
+    ├── src/
+    │   ├── auth/
+    │   │   ├── API.md
+    │   │   └── README.md
+    │   └── utils/
+    │       └── README.md
+    └── README.md
+```
+
+## Error Handling
+
+**Batch Worker**: Tool fallback per module, batch isolation, clear status reporting
+**Coordinator**: Invalid path abort, user decline handling, verification with cleanup
+**Fallback Triggers**: Non-zero exit code, script timeout, unexpected output
+
+## Output Structure
+
+```
+.workflow/docs/{project_name}/
+├── src/                           # Mirrors source structure
+│   ├── modules/
+│   │   ├── README.md              # Navigation
+│   │   ├── auth/
+│   │   │   ├── API.md             # API signatures
+│   │   │   ├── README.md          # Module docs
+│   │   │   └── middleware/
+│   │   │       ├── API.md
+│   │   │       └── README.md
+│   │   └── api/
+│   │       ├── API.md
+│   │       └── README.md
+│   └── utils/
+│       └── README.md
+├── lib/
+│   └── core/
+│       ├── API.md
+│       └── README.md
+├── README.md                      # ✨ Project root overview (auto-generated)
+├── ARCHITECTURE.md                # ✨ System design (auto-generated)
+├── EXAMPLES.md                    # ✨ Usage examples (auto-generated)
+└── api/                           # ✨ Optional (auto-generated if HTTP API detected)
+    └── README.md                  # HTTP API reference
+```
+
+## Usage Examples
+
+```bash
+# Full project documentation generation
+/memory:docs-full-cli
+
+# Target specific directory
+/memory:docs-full-cli src/features/auth
+/memory:docs-full-cli .claude
+
+# Use specific tool
+/memory:docs-full-cli --tool qwen
+/memory:docs-full-cli src --tool qwen
+```
+
+## Key Advantages
+
+- **Efficiency**: 30 modules → 8 agents (73% reduction from sequential)
+- **Resilience**: 3-tier tool fallback per module
+- **Performance**: Parallel batches, no concurrency limits
+- **Observability**: Per-module tool usage, batch-level metrics
+- **Automation**: Zero configuration - strategy auto-selected by directory depth
+- **Path Mirroring**: Clear 1:1 mapping between source and documentation structure
+
+## Template Reference
+
+Templates used from `~/.claude/workflows/cli-templates/prompts/documentation/`:
+- `api.txt`: Code API documentation (Part A: Code API, Part B: HTTP API)
+- `module-readme.txt`: Module purpose, usage, dependencies
+- `folder-navigation.txt`: Navigation README for folders with subdirectories
+
+## Related Commands
+
+- `/memory:docs` - Agent-based documentation planning workflow
+- `/memory:docs-related-cli` - Update docs for changed modules only
+- `/workflow:execute` - Execute documentation tasks (when using agent mode)

.claude/commands/memory/docs-related-cli.md

@@ -0,0 +1,386 @@
+---
+name: docs-related-cli
+description: Generate/update documentation for git-changed modules using CLI execution with batched agents (4 modules/agent) and gemini→qwen→codex fallback, <15 modules uses direct parallel
+argument-hint: "[--tool <gemini|qwen|codex>]"
+---
+
+# Related Documentation Generation - CLI Mode (/memory:docs-related-cli)
+
+## Overview
+
+Orchestrates context-aware documentation generation/update for changed modules using CLI-based execution with batched agents and automatic tool fallback (gemini→qwen→codex).
+
+**Parameters**:
+- `--tool <gemini|qwen|codex>`: Primary tool (default: gemini)
+
+**Execution Flow**:
+1. Change Detection → 2. Plan Presentation → 3. Batched Execution → 4. Verification
+
+## Core Rules
+
+1. **Detect Changes First**: Use git diff to identify affected modules
+2. **Wait for Approval**: Present plan, no execution without user confirmation
+3. **Execution Strategy**:
+   - **<15 modules**: Direct parallel execution (max 4 concurrent per depth, no agent overhead)
+   - **≥15 modules**: Agent batch processing (4 modules/agent, 73% overhead reduction)
+4. **Tool Fallback**: Auto-retry with fallback tools on failure
+5. **Depth Sequential**: Process depths N→0, parallel batches within depth (both modes)
+6. **Related Mode**: Generate/update only changed modules and their parent contexts
+7. **Single Strategy**: Always use `single` strategy (incremental update)
+
+## Tool Fallback Hierarchy
+
+```javascript
+--tool gemini  →  [gemini, qwen, codex]  // default
+--tool qwen    →  [qwen, gemini, codex]
+--tool codex   →  [codex, gemini, qwen]
+```
+
+**Trigger**: Non-zero exit code from generation script
+
+| Tool   | Best For                       | Fallback To    |
+|--------|--------------------------------|----------------|
+| gemini | Documentation, patterns        | qwen → codex   |
+| qwen   | Architecture, system design    | gemini → codex |
+| codex  | Implementation, code quality   | gemini → qwen  |
+
+## Phase 1: Change Detection & Analysis
+
+```javascript
+// Get project metadata
+Bash({command: "pwd && basename \"$(pwd)\" && git rev-parse --show-toplevel 2>/dev/null || pwd", run_in_background: false});
+
+// Detect changed modules
+Bash({command: "~/.claude/scripts/detect_changed_modules.sh list", run_in_background: false});
+
+// Cache git changes
+Bash({command: "git add -A 2>/dev/null || true", run_in_background: false});
+```
+
+**Parse output** `depth:N|path:<PATH>|change:<TYPE>|type:<code|navigation>` to extract affected modules.
+
+**Smart filter**: Auto-detect and skip tests/build/config/vendor based on project tech stack (Node.js/Python/Go/Rust/etc).
+
+**Fallback**: If no changes detected, use recent modules (first 10 by depth).
+
+## Phase 2: Plan Presentation
+
+**Present filtered plan**:
+```
+Related Documentation Generation Plan:
+  Tool: gemini (fallback: qwen → codex)
+  Changed: 4 modules | Batching: 4 modules/agent
+  Project: myproject
+  Output: .workflow/docs/myproject/
+
+  Will generate/update docs for:
+  - ./src/api/auth (5 files, type: code) [new module]
+  - ./src/api (12 files, type: code) [parent of changed auth/]
+  - ./src (8 files, type: code) [parent context]
+  - . (14 files, type: code) [root level]
+
+  Documentation Strategy:
+  - Strategy: single (all modules - incremental update)
+  - Output: API.md + README.md (code folders), README.md only (navigation folders)
+  - Context: Current dir code + child docs
+
+  Auto-skipped (12 paths):
+  - Tests: ./src/api/auth.test.ts (8 paths)
+  - Config: tsconfig.json (3 paths)
+  - Other: node_modules (1 path)
+
+  Agent allocation:
+  - Depth 3 (1 module): 1 agent [1]
+  - Depth 2 (1 module): 1 agent [1]
+  - Depth 1 (1 module): 1 agent [1]
+  - Depth 0 (1 module): 1 agent [1]
+
+  Estimated time: ~5-10 minutes
+
+  Confirm execution? (y/n)
+```
+
+**Decision logic**:
+- User confirms "y": Proceed with execution
+- User declines "n": Abort, no changes
+- <15 modules: Direct execution
+- ≥15 modules: Agent batch execution
+
+## Phase 3A: Direct Execution (<15 modules)
+
+**Strategy**: Parallel execution within depth (max 4 concurrent), no agent overhead.
+
+**CRITICAL**: All Bash commands use `run_in_background: false` for synchronous execution.
+
+```javascript
+let project_name = detect_project_name();
+
+for (let depth of sorted_depths.reverse()) {  // N → 0
+  let batches = batch_modules(modules_by_depth[depth], 4);
+
+  for (let batch of batches) {
+    let parallel_tasks = batch.map(module => {
+      return async () => {
+        for (let tool of tool_order) {
+          Bash({
+            command: `cd ${module.path} && ~/.claude/scripts/generate_module_docs.sh "single" "." "${project_name}" "${tool}"`,
+            run_in_background: false
+          });
+          if (bash_result.exit_code === 0) {
+            report(`✅ ${module.path} docs generated with ${tool}`);
+            return true;
+          }
+        }
+        report(`❌ FAILED: ${module.path} failed all tools`);
+        return false;
+      };
+    });
+    await Promise.all(parallel_tasks.map(task => task()));
+  }
+}
+```
+
+## Phase 3B: Agent Batch Execution (≥15 modules)
+
+### Batching Strategy
+
+```javascript
+// Batch modules into groups of 4
+function batch_modules(modules, batch_size = 4) {
+  let batches = [];
+  for (let i = 0; i < modules.length; i += batch_size) {
+    batches.push(modules.slice(i, i + batch_size));
+  }
+  return batches;
+}
+// Examples: 10→[4,4,2] | 8→[4,4] | 3→[3]
+```
+
+### Coordinator Orchestration
+
+```javascript
+let modules_by_depth = group_by_depth(changed_modules);
+let tool_order = construct_tool_order(primary_tool);
+let project_name = detect_project_name();
+
+for (let depth of sorted_depths.reverse()) {  // N → 0
+  let batches = batch_modules(modules_by_depth[depth], 4);
+  let worker_tasks = [];
+
+  for (let batch of batches) {
+    worker_tasks.push(
+      Task(
+        subagent_type="memory-bridge",
+        description=`Generate docs for ${batch.length} modules at depth ${depth}`,
+        prompt=generate_batch_worker_prompt(batch, tool_order, depth, project_name, "related")
+      )
+    );
+  }
+
+  await parallel_execute(worker_tasks);  // Batches run in parallel
+}
+```
+
+### Batch Worker Prompt Template
+
+```
+PURPOSE: Generate/update documentation for assigned modules with tool fallback (related mode)
+
+TASK:
+Generate documentation for the following modules based on recent changes. For each module, try tools in order until success.
+
+PROJECT: {{project_name}}
+OUTPUT: .workflow/docs/{{project_name}}/
+
+MODULES:
+{{module_path_1}} (type: {{folder_type_1}})
+{{module_path_2}} (type: {{folder_type_2}})
+{{module_path_3}} (type: {{folder_type_3}})
+{{module_path_4}} (type: {{folder_type_4}})
+
+TOOLS (try in order):
+1. {{tool_1}}
+2. {{tool_2}}
+3. {{tool_3}}
+
+EXECUTION:
+For each module above:
+  1. Try tool 1:
+     Bash({
+       command: `cd "{{module_path}}" && ~/.claude/scripts/generate_module_docs.sh "single" "." "{{project_name}}" "{{tool_1}}"`,
+       run_in_background: false
+     })
+     → Success: Report "✅ {{module_path}} docs generated with {{tool_1}}", proceed to next module
+     → Failure: Try tool 2
+  2. Try tool 2:
+     Bash({
+       command: `cd "{{module_path}}" && ~/.claude/scripts/generate_module_docs.sh "single" "." "{{project_name}}" "{{tool_2}}"`,
+       run_in_background: false
+     })
+     → Success: Report "✅ {{module_path}} docs generated with {{tool_2}}", proceed to next module
+     → Failure: Try tool 3
+  3. Try tool 3:
+     Bash({
+       command: `cd "{{module_path}}" && ~/.claude/scripts/generate_module_docs.sh "single" "." "{{project_name}}" "{{tool_3}}"`,
+       run_in_background: false
+     })
+     → Success: Report "✅ {{module_path}} docs generated with {{tool_3}}", proceed to next module
+     → Failure: Report "❌ FAILED: {{module_path}} failed all tools", proceed to next module
+
+FOLDER TYPE HANDLING:
+  - code: Generate API.md + README.md
+  - navigation: Generate README.md only
+
+REPORTING:
+Report final summary with:
+- Total processed: X modules
+- Successful: Y modules
+- Failed: Z modules
+- Tool usage: {{tool_1}}:X, {{tool_2}}:Y, {{tool_3}}:Z
+```
+
+## Phase 4: Verification
+
+```javascript
+// Check documentation files created/updated
+Bash({command: 'find .workflow/docs -type f -name "*.md" 2>/dev/null | wc -l', run_in_background: false});
+
+// Display recent changes
+Bash({command: 'find .workflow/docs -type f -name "*.md" -mmin -60 2>/dev/null', run_in_background: false});
+```
+
+**Aggregate results**:
+```
+Documentation Generation Summary:
+  Total: 4 | Success: 4 | Failed: 0
+
+  Tool usage:
+  - gemini: 4 modules
+  - qwen: 0 modules (fallback)
+  - codex: 0 modules
+
+  Changes:
+  .workflow/docs/myproject/src/api/auth/API.md      (new)
+  .workflow/docs/myproject/src/api/auth/README.md   (new)
+  .workflow/docs/myproject/src/api/API.md           (updated)
+  .workflow/docs/myproject/src/api/README.md        (updated)
+  .workflow/docs/myproject/src/API.md               (updated)
+  .workflow/docs/myproject/src/README.md            (updated)
+  .workflow/docs/myproject/API.md                   (updated)
+  .workflow/docs/myproject/README.md                (updated)
+```
+
+## Execution Summary
+
+**Module Count Threshold**:
+- **<15 modules**: Coordinator executes Phase 3A (Direct Execution)
+- **≥15 modules**: Coordinator executes Phase 3B (Agent Batch Execution)
+
+**Agent Hierarchy** (for ≥15 modules):
+- **Coordinator**: Handles batch division, spawns worker agents per depth
+- **Worker Agents**: Each processes 4 modules with tool fallback (related mode)
+
+## Error Handling
+
+**Batch Worker**:
+- Tool fallback per module (auto-retry)
+- Batch isolation (failures don't propagate)
+- Clear per-module status reporting
+
+**Coordinator**:
+- No changes: Use fallback (recent 10 modules)
+- User decline: No execution
+- Verification fail: Report incomplete modules
+- Partial failures: Continue execution, report failed modules
+
+**Fallback Triggers**:
+- Non-zero exit code
+- Script timeout
+- Unexpected output
+
+## Output Structure
+
+```
+.workflow/docs/{project_name}/
+├── src/                           # Mirrors source structure
+│   ├── modules/
+│   │   ├── README.md
+│   │   ├── auth/
+│   │   │   ├── API.md             # Updated based on code changes
+│   │   │   └── README.md          # Updated based on code changes
+│   │   └── api/
+│   │       ├── API.md
+│   │       └── README.md
+│   └── utils/
+│       └── README.md
+└── README.md
+```
+
+## Usage Examples
+
+```bash
+# Daily development documentation update
+/memory:docs-related-cli
+
+# After feature work with specific tool
+/memory:docs-related-cli --tool qwen
+
+# Code quality documentation review after implementation
+/memory:docs-related-cli --tool codex
+```
+
+## Key Advantages
+
+**Efficiency**: 30 modules → 8 agents (73% reduction)
+**Resilience**: 3-tier fallback per module
+**Performance**: Parallel batches, no concurrency limits
+**Context-aware**: Updates based on actual git changes
+**Fast**: Only affected modules, not entire project
+**Incremental**: Single strategy for focused updates
+
+## Coordinator Checklist
+
+- Parse `--tool` (default: gemini)
+- Get project metadata (name, root)
+- Detect changed modules via detect_changed_modules.sh
+- **Smart filter modules** (auto-detect tech stack, skip tests/build/config/vendor)
+- Cache git changes
+- Apply fallback if no changes (recent 10 modules)
+- Construct tool fallback order
+- **Present filtered plan** with skip reasons and change types
+- **Wait for y/n confirmation**
+- Determine execution mode:
+  - **<15 modules**: Direct execution (Phase 3A)
+    - For each depth (N→0): Sequential module updates with tool fallback
+  - **≥15 modules**: Agent batch execution (Phase 3B)
+    - For each depth (N→0): Batch modules (4 per batch), spawn batch workers in parallel
+- Wait for depth/batch completion
+- Aggregate results
+- Verification check (documentation files created/updated)
+- Display summary + recent changes
+
+## Comparison with Full Documentation Generation
+
+| Aspect | Related Generation | Full Generation |
+|--------|-------------------|-----------------|
+| **Scope** | Changed modules only | All project modules |
+| **Speed** | Fast (minutes) | Slower (10-30 min) |
+| **Use case** | Daily development | Initial setup, major refactoring |
+| **Strategy** | `single` (all) | `full` (L3) + `single` (L1-2) |
+| **Trigger** | After commits | After setup or major changes |
+| **Batching** | 4 modules/agent | 4 modules/agent |
+| **Fallback** | gemini→qwen→codex | gemini→qwen→codex |
+| **Complexity threshold** | ≤15 modules | ≤20 modules |
+
+## Template Reference
+
+Templates used from `~/.claude/workflows/cli-templates/prompts/documentation/`:
+- `api.txt`: Code API documentation
+- `module-readme.txt`: Module purpose, usage, dependencies
+- `folder-navigation.txt`: Navigation README for folders
+
+## Related Commands
+
+- `/memory:docs-full-cli` - Full project documentation generation
+- `/memory:docs` - Agent-based documentation planning workflow
+- `/memory:update-related` - Update CLAUDE.md for changed modules

.claude/commands/memory/docs.md

@@ -44,7 +44,11 @@ Lightweight planner that analyzes project structure, decomposes documentation wo
 /memory:docs [path] [--tool <gemini|qwen|codex>] [--mode <full|partial>] [--cli-execute]
 ```
 
-- **path**: Target directory (default: current directory)
+- **path**: Source directory to analyze (default: current directory)
+  - Specifies the source code directory to be documented
+  - Documentation is generated in a separate `.workflow/docs/{project_name}/` directory at the workspace root, **not** within the source `path` itself
+  - The source path's structure is mirrored within the project-specific documentation folder
+  - Example: analyzing `src/modules` produces documentation at `.workflow/docs/{project_name}/src/modules/`
 - **--mode**: Documentation generation mode (default: full)
   - `full`: Complete documentation (modules + README + ARCHITECTURE + EXAMPLES + HTTP API)
   - `partial`: Module documentation only (API.md + README.md)
@@ -63,10 +67,10 @@ Lightweight planner that analyzes project structure, decomposes documentation wo
 bash(pwd && basename "$(pwd)" && git rev-parse --show-toplevel 2>/dev/null || pwd && date +%Y%m%d-%H%M%S)
 
 # Create session directories (replace timestamp)
-bash(mkdir -p .workflow/WFS-docs-{timestamp}/.{task,process,summaries} && touch .workflow/.active-WFS-docs-{timestamp})
+bash(mkdir -p .workflow/active/WFS-docs-{timestamp}/.{task,process,summaries})
 
 # Create workflow-session.json (replace values)
-bash(echo '{"session_id":"WFS-docs-{timestamp}","project":"{project} documentation","status":"planning","timestamp":"2024-01-20T14:30:22+08:00","path":".","target_path":"{target_path}","project_root":"{project_root}","project_name":"{project_name}","mode":"full","tool":"gemini","cli_execute":false}' | jq '.' > .workflow/WFS-docs-{timestamp}/workflow-session.json)
+bash(echo '{"session_id":"WFS-docs-{timestamp}","project":"{project} documentation","status":"planning","timestamp":"2024-01-20T14:30:22+08:00","path":".","target_path":"{target_path}","project_root":"{project_root}","project_name":"{project_name}","mode":"full","tool":"gemini","cli_execute":false}' | jq '.' > .workflow/active/WFS-docs-{timestamp}/workflow-session.json)
 ```
 
 ### Phase 2: Analyze Structure
@@ -89,7 +93,7 @@ bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${proj
 bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${project_name} -type f -name "*.md" ! -path "*/README.md" ! -path "*/ARCHITECTURE.md" ! -path "*/EXAMPLES.md" ! -path "*/api/*" 2>/dev/null | xargs cat 2>/dev/null; fi)
 ```
 
-**Data Processing**: Parse bash outputs, calculate statistics, use **Write tool** to create `${session_dir}/.process/phase2-analysis.json` with structure:
+**Data Processing**: Parse bash outputs, calculate statistics, use **Write tool** to create `${session_dir}/.process/doc-planning-data.json` with structure:
 
 ```json
 {
@@ -118,7 +122,7 @@ bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${proj
 
 **Then** use **Edit tool** to update `workflow-session.json` adding analysis field.
 
-**Output**: Single `phase2-analysis.json` with all analysis data (no temp files or Python scripts).
+**Output**: Single `doc-planning-data.json` with all analysis data (no temp files or Python scripts).
 
 **Auto-skipped**: Tests (`**/test/**`, `**/*.test.*`), Build (`**/node_modules/**`, `**/dist/**`), Config (root-level files), Vendor directories.
 
@@ -127,8 +131,8 @@ bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${proj
 **Commands**:
 
 ```bash
-# Count existing docs from phase2-analysis.json
-bash(cat .workflow/WFS-docs-{timestamp}/.process/phase2-analysis.json | jq '.existing_docs.file_list | length')
+# Count existing docs from doc-planning-data.json
+bash(cat .workflow/active/WFS-docs-{timestamp}/.process/doc-planning-data.json | jq '.existing_docs.file_list | length')
 ```
 
 **Data Processing**: Use count result, then use **Edit tool** to update `workflow-session.json`:
@@ -182,11 +186,11 @@ Large Projects (single dir >10 docs):
 **Commands**:
 
 ```bash
-# 1. Get top-level directories from phase2-analysis.json
-bash(cat .workflow/WFS-docs-{timestamp}/.process/phase2-analysis.json | jq -r '.top_level_dirs[]')
+# 1. Get top-level directories from doc-planning-data.json
+bash(cat .workflow/active/WFS-docs-{timestamp}/.process/doc-planning-data.json | jq -r '.top_level_dirs[]')
 
 # 2. Get mode from workflow-session.json
-bash(cat .workflow/WFS-docs-{timestamp}/workflow-session.json | jq -r '.mode // "full"')
+bash(cat .workflow/active/WFS-docs-{timestamp}/workflow-session.json | jq -r '.mode // "full"')
 
 # 3. Check for HTTP API
 bash(grep -r "router\.|@Get\|@Post" src/ 2>/dev/null && echo "API_FOUND" || echo "NO_API")
@@ -201,7 +205,7 @@ bash(grep -r "router\.|@Get\|@Post" src/ 2>/dev/null && echo "API_FOUND" || echo
    - If total ≤10 docs: create group
    - If total >10 docs: split to 1 dir/group or subdivide
    - If single dir >10 docs: split by subdirectories
-3. Use **Edit tool** to update `phase2-analysis.json` adding groups field:
+3. Use **Edit tool** to update `doc-planning-data.json` adding groups field:
    ```json
    "groups": {
      "count": 3,
@@ -215,7 +219,7 @@ bash(grep -r "router\.|@Get\|@Post" src/ 2>/dev/null && echo "API_FOUND" || echo
 
 **Task ID Calculation**:
 ```bash
-group_count=$(jq '.groups.count' .workflow/WFS-docs-{timestamp}/.process/phase2-analysis.json)
+group_count=$(jq '.groups.count' .workflow/active/WFS-docs-{timestamp}/.process/doc-planning-data.json)
 readme_id=$((group_count + 1))   # Next ID after groups
 arch_id=$((group_count + 2))
 api_id=$((group_count + 3))
@@ -237,7 +241,7 @@ api_id=$((group_count + 3))
 
 **Generation Process**:
 1. Read configuration values (tool, cli_execute, mode) from workflow-session.json
-2. Read group assignments from phase2-analysis.json
+2. Read group assignments from doc-planning-data.json
 3. Generate Level 1 tasks (IMPL-001 to IMPL-N, one per group)
 4. Generate Level 2+ tasks if mode=full (README, ARCHITECTURE, HTTP API)
 
@@ -262,14 +266,14 @@ api_id=$((group_count + 3))
   },
   "context": {
     "requirements": [
-      "Process directories from group ${group_number} in phase2-analysis.json",
+      "Process directories from group ${group_number} in doc-planning-data.json",
       "Generate docs to .workflow/docs/${project_name}/ (mirrored structure)",
       "Code folders: API.md + README.md; Navigation folders: README.md only",
       "Use pre-analyzed data from Phase 2 (no redundant analysis)"
     ],
     "focus_paths": ["${group_dirs_from_json}"],
     "precomputed_data": {
-      "phase2_analysis": "${session_dir}/.process/phase2-analysis.json"
+      "phase2_analysis": "${session_dir}/.process/doc-planning-data.json"
     }
   },
   "flow_control": {
@@ -278,8 +282,8 @@ api_id=$((group_count + 3))
         "step": "load_precomputed_data",
         "action": "Load Phase 2 analysis and extract group directories",
         "commands": [
-          "bash(cat ${session_dir}/.process/phase2-analysis.json)",
-          "bash(jq '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories' ${session_dir}/.process/phase2-analysis.json)"
+          "bash(cat ${session_dir}/.process/doc-planning-data.json)",
+          "bash(jq '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories' ${session_dir}/.process/doc-planning-data.json)"
         ],
         "output_to": "phase2_context",
         "note": "Single JSON file contains all Phase 2 analysis results"
@@ -324,7 +328,7 @@ api_id=$((group_count + 3))
 {
   "step": 2,
   "title": "Batch generate documentation via CLI",
-  "command": "bash(dirs=$(jq -r '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories[]' ${session_dir}/.process/phase2-analysis.json); for dir in $dirs; do cd \"$dir\" && gemini --approval-mode yolo -p \"PURPOSE: Generate module docs\\nTASK: Create documentation\\nMODE: write\\nCONTEXT: @**/* [phase2_context]\\nEXPECTED: API.md and README.md\\nRULES: Mirror structure\" || echo \"Failed: $dir\"; cd -; done)",
+  "command": "bash(dirs=$(jq -r '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories[]' ${session_dir}/.process/doc-planning-data.json); for dir in $dirs; do cd \"$dir\" && gemini --approval-mode yolo -p \"PURPOSE: Generate module docs\\nTASK: Create documentation\\nMODE: write\\nCONTEXT: @**/* [phase2_context]\\nEXPECTED: API.md and README.md\\nRULES: Mirror structure\" || echo \"Failed: $dir\"; cd -; done)",
   "depends_on": [1],
   "output": "generated_docs"
 }
@@ -458,14 +462,13 @@ api_id=$((group_count + 3))
 **Unified Structure** (single JSON replaces multiple text files):
 
 ```
-.workflow/
-├── .active-WFS-docs-{timestamp}
+.workflow/active/
 └── WFS-docs-{timestamp}/
     ├── workflow-session.json            # Session metadata
     ├── IMPL_PLAN.md
     ├── TODO_LIST.md
     ├── .process/
-    │   └── phase2-analysis.json         # All Phase 2 analysis data (replaces 7+ files)
+    │   └── doc-planning-data.json       # All Phase 2 analysis data (replaces 7+ files)
     └── .task/
         ├── IMPL-001.json                # Small: all modules | Large: group 1
         ├── IMPL-00N.json                # (Large only: groups 2-N)
@@ -474,7 +477,7 @@ api_id=$((group_count + 3))
         └── IMPL-{N+3}.json              # HTTP API (optional)
 ```
 
-**phase2-analysis.json Structure**:
+**doc-planning-data.json Structure**:
 ```json
 {
   "metadata": {

.claude/commands/memory/tech-research.md

@@ -128,8 +128,8 @@ Generate a complete tech stack SKILL package with Exa research.
 1. **Extract Tech Stack Information**:
 
    IF MODE == 'session':
-     - Read `.workflow/{SESSION_ID}/workflow-session.json`
-     - Read `.workflow/{SESSION_ID}/.process/context-package.json`
+     - Read `.workflow/active/{session_id}/workflow-session.json`
+     - Read `.workflow/active/{session_id}/.process/context-package.json`
      - Extract tech_stack: {language, frameworks, libraries}
      - Build tech stack name: \"{language}-{framework1}-{framework2}\"
      - Example: \"typescript-react-nextjs\"

.claude/commands/memory/update-full.md

@@ -95,14 +95,15 @@ src/ (depth 1) → SINGLE-LAYER STRATEGY
 
 ### Phase 1: Discovery & Analysis
 
-```bash
-# Cache git changes
-bash(git add -A 2>/dev/null || true)
+```javascript
+// Cache git changes
+Bash({command: "git add -A 2>/dev/null || true", run_in_background: false});
 
-# Get module structure
-bash(~/.claude/scripts/get_modules_by_depth.sh list)
-# OR with --path
-bash(cd <target-path> && ~/.claude/scripts/get_modules_by_depth.sh list)
+// Get module structure
+Bash({command: "~/.claude/scripts/get_modules_by_depth.sh list", run_in_background: false});
+
+// OR with --path
+Bash({command: "cd <target-path> && ~/.claude/scripts/get_modules_by_depth.sh list", run_in_background: false});
 ```
 
 **Parse output** `depth:N|path:<PATH>|...` to extract module paths and count.
@@ -172,26 +173,23 @@ Update Plan:
 
 **Strategy**: Parallel execution within layer (max 4 concurrent), no agent overhead.
 
-```javascript
-// Group modules by LAYER (not depth)
-let modules_by_layer = group_by_layer(module_list);
-let tool_order = construct_tool_order(primary_tool);
+**CRITICAL**: All Bash commands use `run_in_background: false` for synchronous execution.
 
-// Process by LAYER (3 → 2 → 1), not by depth
+```javascript
 for (let layer of [3, 2, 1]) {
   if (modules_by_layer[layer].length === 0) continue;
-
   let batches = batch_modules(modules_by_layer[layer], 4);
 
   for (let batch of batches) {
     let parallel_tasks = batch.map(module => {
       return async () => {
-        // Auto-determine strategy based on depth
         let strategy = module.depth >= 3 ? "multi-layer" : "single-layer";
-
         for (let tool of tool_order) {
-          let exit_code = bash(`cd ${module.path} && ~/.claude/scripts/update_module_claude.sh "${strategy}" "." "${tool}"`);
-          if (exit_code === 0) {
+          Bash({
+            command: `cd ${module.path} && ~/.claude/scripts/update_module_claude.sh "${strategy}" "." "${tool}"`,
+            run_in_background: false
+          });
+          if (bash_result.exit_code === 0) {
             report(`✅ ${module.path} (Layer ${layer}) updated with ${tool}`);
             return true;
           }
@@ -200,7 +198,6 @@ for (let layer of [3, 2, 1]) {
         return false;
       };
     });
-
     await Promise.all(parallel_tasks.map(task => task()));
   }
 }
@@ -255,7 +252,10 @@ EXECUTION SCRIPT: ~/.claude/scripts/update_module_claude.sh
 EXECUTION FLOW (for each module):
   1. Tool fallback loop (exit on first success):
      for tool in {{tool_1}} {{tool_2}} {{tool_3}}; do
-       bash(cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "{{strategy}}" "." "${tool}")
+       Bash({
+         command: `cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "{{strategy}}" "." "${tool}"`,
+         run_in_background: false
+       })
        exit_code=$?
 
        if [ $exit_code -eq 0 ]; then
@@ -287,12 +287,12 @@ REPORTING FORMAT:
 ```
 ### Phase 4: Safety Verification
 
-```bash
-# Check only CLAUDE.md modified
-bash(git diff --cached --name-only | grep -v "CLAUDE.md" || echo "Only CLAUDE.md files modified")
+```javascript
+// Check only CLAUDE.md files modified
+Bash({command: 'git diff --cached --name-only | grep -v "CLAUDE.md" || echo "Only CLAUDE.md files modified"', run_in_background: false});
 
-# Display status
-bash(git status --short)
+// Display status
+Bash({command: "git status --short", run_in_background: false});
 ```
 
 **Result Summary**:

.claude/commands/memory/update-related.md

@@ -39,12 +39,12 @@ Orchestrates context-aware CLAUDE.md updates for changed modules using batched a
 
 ## Phase 1: Change Detection & Analysis
 
-```bash
-# Detect changed modules (no index refresh needed)
-bash(~/.claude/scripts/detect_changed_modules.sh list)
+```javascript
+// Detect changed modules
+Bash({command: "~/.claude/scripts/detect_changed_modules.sh list", run_in_background: false});
 
-# Cache git changes
-bash(git add -A 2>/dev/null || true)
+// Cache git changes
+Bash({command: "git add -A 2>/dev/null || true", run_in_background: false});
 ```
 
 **Parse output** `depth:N|path:<PATH>|change:<TYPE>` to extract affected modules.
@@ -89,47 +89,36 @@ Related Update Plan:
 
 ## Phase 3A: Direct Execution (<15 modules)
 
-**Strategy**: Parallel execution within depth (max 4 concurrent), no agent overhead, tool fallback per module.
+**Strategy**: Parallel execution within depth (max 4 concurrent), no agent overhead.
+
+**CRITICAL**: All Bash commands use `run_in_background: false` for synchronous execution.
 
 ```javascript
-let modules_by_depth = group_by_depth(changed_modules);
-let tool_order = construct_tool_order(primary_tool);
-
 for (let depth of sorted_depths.reverse()) {  // N → 0
-  let modules = modules_by_depth[depth];
-  let batches = batch_modules(modules, 4);  // Split into groups of 4
+  let batches = batch_modules(modules_by_depth[depth], 4);
 
   for (let batch of batches) {
-    // Execute batch in parallel (max 4 concurrent)
     let parallel_tasks = batch.map(module => {
       return async () => {
-        let success = false;
         for (let tool of tool_order) {
-          let exit_code = bash(cd ${module.path} && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "${tool}");
-          if (exit_code === 0) {
-            report("${module.path} updated with ${tool}");
-            success = true;
-            break;
+          Bash({
+            command: `cd ${module.path} && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "${tool}"`,
+            run_in_background: false
+          });
+          if (bash_result.exit_code === 0) {
+            report(`✅ ${module.path} updated with ${tool}`);
+            return true;
           }
         }
-        if (!success) {
-          report("FAILED: ${module.path} failed all tools");
-        }
+        report(`❌ FAILED: ${module.path} failed all tools`);
+        return false;
       };
     });
-
-    await Promise.all(parallel_tasks.map(task => task()));  // Run batch in parallel
+    await Promise.all(parallel_tasks.map(task => task()));
   }
 }
 ```
 
-**Benefits**:
-- No agent startup overhead
-- Parallel execution within depth (max 4 concurrent)
-- Tool fallback still applies per module
-- Faster for small changesets (<15 modules)
-- Same batching strategy as Phase 3B but without agent layer
-
 ---
 
 ## Phase 3B: Agent Batch Execution (≥15 modules)
@@ -193,19 +182,27 @@ TOOLS (try in order):
 
 EXECUTION:
 For each module above:
-  1. cd "{{module_path}}"
-  2. Try tool 1:
-     bash(cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "{{tool_1}}")
-     → Success: Report "{{module_path}} updated with {{tool_1}}", proceed to next module
+  1. Try tool 1:
+     Bash({
+       command: `cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "{{tool_1}}"`,
+       run_in_background: false
+     })
+     → Success: Report "✅ {{module_path}} updated with {{tool_1}}", proceed to next module
      → Failure: Try tool 2
-  3. Try tool 2:
-     bash(cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "{{tool_2}}")
-     → Success: Report "{{module_path}} updated with {{tool_2}}", proceed to next module
+  2. Try tool 2:
+     Bash({
+       command: `cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "{{tool_2}}"`,
+       run_in_background: false
+     })
+     → Success: Report "✅ {{module_path}} updated with {{tool_2}}", proceed to next module
      → Failure: Try tool 3
-  4. Try tool 3:
-     bash(cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "{{tool_3}}")
-     → Success: Report "{{module_path}} updated with {{tool_3}}", proceed to next module
-     → Failure: Report "FAILED: {{module_path}} failed all tools", proceed to next module
+  3. Try tool 3:
+     Bash({
+       command: `cd "{{module_path}}" && ~/.claude/scripts/update_module_claude.sh "single-layer" "." "{{tool_3}}"`,
+       run_in_background: false
+     })
+     → Success: Report "✅ {{module_path}} updated with {{tool_3}}", proceed to next module
+     → Failure: Report "❌ FAILED: {{module_path}} failed all tools", proceed to next module
 
 REPORTING:
 Report final summary with:
@@ -213,30 +210,16 @@ Report final summary with:
 - Successful: Y modules
 - Failed: Z modules
 - Tool usage: {{tool_1}}:X, {{tool_2}}:Y, {{tool_3}}:Z
-- Detailed results for each module
 ```
 
-### Example Execution
-
-**Depth 3 (new module)**:
-```javascript
-Task(subagent_type="memory-bridge", batch=[./src/api/auth], mode="related")
-```
-
-**Benefits**:
-- 4 modules → 1 agent (75% reduction)
-- Parallel batches, sequential within batch
-- Each module gets full fallback chain
-- Context-aware updates based on git changes
-
 ## Phase 4: Safety Verification
 
-```bash
-# Check only CLAUDE.md modified
-bash(git diff --cached --name-only | grep -v "CLAUDE.md" || echo "Only CLAUDE.md files modified")
+```javascript
+// Check only CLAUDE.md modified
+Bash({command: 'git diff --cached --name-only | grep -v "CLAUDE.md" || echo "Only CLAUDE.md files modified"', run_in_background: false});
 
-# Display statistics
-bash(git diff --stat)
+// Display statistics
+Bash({command: "git diff --stat", run_in_background: false});
 ```
 
 **Aggregate results**:

.claude/commands/task/execute.md

@@ -199,10 +199,10 @@ This is the simplified data structure loaded to provide context for task executi
     "session": "WFS-user-auth",
     "phase": "IMPLEMENT",
     "session_context": {
-      "workflow_directory": ".workflow/WFS-user-auth/",
-      "todo_list_location": ".workflow/WFS-user-auth/TODO_LIST.md",
-      "summaries_directory": ".workflow/WFS-user-auth/.summaries/",
-      "task_json_location": ".workflow/WFS-user-auth/.task/"
+      "workflow_directory": ".workflow/active/WFS-user-auth/",
+      "todo_list_location": ".workflow/active/WFS-user-auth/TODO_LIST.md",
+      "summaries_directory": ".workflow/active/WFS-user-auth/.summaries/",
+      "task_json_location": ".workflow/active/WFS-user-auth/.task/"
     }
   },
   "execution": {

.claude/commands/task/replan.md

@@ -7,6 +7,14 @@ allowed-tools: Read(*), Write(*), Edit(*), TodoWrite(*), Glob(*), Bash(*)
 
 # Task Replan Command (/task:replan)
 
+> **⚠️ DEPRECATION NOTICE**: This command is maintained for backward compatibility. For new workflows, use `/workflow:replan` which provides:
+> - Session-level replanning with comprehensive artifact updates
+> - Interactive boundary clarification
+> - Updates to IMPL_PLAN.md, TODO_LIST.md, and session metadata
+> - Better integration with workflow sessions
+>
+> **Migration**: Replace `/task:replan IMPL-1 "changes"` with `/workflow:replan IMPL-1 "changes"`
+
 ## Overview
 Replans individual tasks or batch processes multiple tasks with change tracking and backup management.
 
@@ -14,9 +22,6 @@ Replans individual tasks or batch processes multiple tasks with change tracking
 - **Single Task Mode**: Replan one task with specific changes
 - **Batch Mode**: Process multiple tasks from action-plan verification report
 
-## Core Principles
-**Task System:** @~/.claude/workflows/task-core.md
-
 ## Key Features
 - **Single/Batch Operations**: Single task or multiple tasks from verification report
 - **Multiple Input Sources**: Text, files, or verification report
@@ -274,7 +279,7 @@ Backup saved to .task/backup/IMPL-2-v1.0.json
 
 ### Batch Mode - From Verification Report
 ```bash
-/task:replan --batch .workflow/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md
+/task:replan --batch .workflow/active/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md
 
 Parsing verification report...
 Found 4 tasks requiring replanning:

.claude/commands/workflow/action-plan-verify.md

@@ -32,7 +32,7 @@ Identify inconsistencies, duplications, ambiguities, and underspecified items be
 IF --session parameter provided:
     session_id = provided session
 ELSE:
-    CHECK: .workflow/.active-* marker files
+    CHECK: find .workflow/active/ -name "WFS-*" -type d
     IF active_session EXISTS:
         session_id = get_active_session()
     ELSE:
@@ -40,7 +40,7 @@ ELSE:
         EXIT
 
 # Derive absolute paths
-session_dir = .workflow/WFS-{session}
+session_dir = .workflow/active/WFS-{session}
 brainstorm_dir = session_dir/.brainstorming
 task_dir = session_dir/.task
 
@@ -333,7 +333,7 @@ Output a Markdown report (no file writes) with the following structure:
 
 #### TodoWrite-Based Remediation Workflow
 
-**Report Location**: `.workflow/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md`
+**Report Location**: `.workflow/active/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md`
 
 **Recommended Workflow**:
 1. **Create TodoWrite Task List**: Extract all findings from report
@@ -361,7 +361,7 @@ Priority Order:
 
 **Save Analysis Report**:
 ```bash
-report_path = ".workflow/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md"
+report_path = ".workflow/active/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md"
 Write(report_path, full_report_content)
 ```
 
@@ -404,12 +404,12 @@ TodoWrite([
 **File Modification Workflow**:
 ```bash
 # For task JSON modifications:
-1. Read(.workflow/WFS-{session}/.task/IMPL-X.Y.json)
+1. Read(.workflow/active/WFS-{session}/.task/IMPL-X.Y.json)
 2. Edit() to apply fixes
 3. Mark todo as completed
 
 # For IMPL_PLAN modifications:
-1. Read(.workflow/WFS-{session}/IMPL_PLAN.md)
+1. Read(.workflow/active/WFS-{session}/IMPL_PLAN.md)
 2. Edit() to apply strategic changes
 3. Mark todo as completed
 ```

.claude/commands/workflow/brainstorm/api-designer.md

@@ -46,10 +46,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -162,7 +162,7 @@ IF update_mode = "incremental":
 
 ### Output Files
 ```
-.workflow/WFS-[topic]/.brainstorming/
+.workflow/active/WFS-[topic]/.brainstorming/
 ├── guidance-specification.md          # Input: Framework (if exists)
 └── api-designer/
     └── analysis.md            # ★ OUTPUT: Framework-based analysis
@@ -181,7 +181,7 @@ IF update_mode = "incremental":
 Session detection and selection:
 ```bash
 # Check for active sessions
-active_sessions=$(find .workflow -name ".active-*" 2>/dev/null)
+active_sessions=$(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null)
 if [ multiple_sessions ]; then
   prompt_user_to_select_session()
 else
@@ -280,7 +280,7 @@ TodoWrite tracking for two-step process:
 
 ### Output Location
 ```
-.workflow/WFS-{topic-slug}/.brainstorming/api-designer/
+.workflow/active/WFS-{topic-slug}/.brainstorming/api-designer/
 ├── analysis.md                 # Primary API design analysis
 ├── api-specification.md        # Detailed endpoint specifications (OpenAPI/Swagger)
 ├── data-contracts.md           # Request/response schemas and validation rules
@@ -531,7 +531,7 @@ Upon completion, update `workflow-session.json`:
       "api_designer": {
         "status": "completed",
         "completed_at": "timestamp",
-        "output_directory": ".workflow/WFS-{topic}/.brainstorming/api-designer/",
+        "output_directory": ".workflow/active/WFS-{topic}/.brainstorming/api-designer/",
         "key_insights": ["endpoint_design", "versioning_strategy", "data_contracts"]
       }
     }

.claude/commands/workflow/brainstorm/artifacts.md

@@ -10,7 +10,7 @@ allowed-tools: TodoWrite(*), Read(*), Write(*), Glob(*)
 Six-phase workflow: **Automatic project context collection** → Extract topic challenges → Select roles → Generate task-specific questions → Detect conflicts → Generate confirmed guidance (declarative statements only).
 
 **Input**: `"GOAL: [objective] SCOPE: [boundaries] CONTEXT: [background]" [--count N]`
-**Output**: `.workflow/WFS-{topic}/.brainstorming/guidance-specification.md` (CONFIRMED/SELECTED format)
+**Output**: `.workflow/active/WFS-{topic}/.brainstorming/guidance-specification.md` (CONFIRMED/SELECTED format)
 **Core Principle**: Questions dynamically generated from project context + topic keywords/challenges, NOT from generic templates
 
 **Parameters**:
@@ -32,7 +32,7 @@ Six-phase workflow: **Automatic project context collection** → Extract topic c
 **Standalone Mode**:
 ```json
 [
-  {"content": "Initialize session (.workflow/.active-* check, parse --count parameter)", "status": "pending", "activeForm": "Initializing"},
+  {"content": "Initialize session (.workflow/active/ session check, parse --count parameter)", "status": "pending", "activeForm": "Initializing"},
   {"content": "Phase 0: Automatic project context collection (call context-gather)", "status": "pending", "activeForm": "Phase 0 context collection"},
   {"content": "Phase 1: Extract challenges, output 2-4 task-specific questions, wait for user input", "status": "pending", "activeForm": "Phase 1 topic analysis"},
   {"content": "Phase 2: Recommend count+2 roles, output role selection, wait for user input", "status": "pending", "activeForm": "Phase 2 role selection"},
@@ -133,7 +133,7 @@ b) {role-name} ({中文名})
 ## Execution Phases
 
 ### Session Management
-- Check `.workflow/.active-*` markers first
+- Check `.workflow/active/` for existing sessions
 - Multiple sessions → Prompt selection | Single → Use it | None → Create `WFS-[topic-slug]`
 - Parse `--count N` parameter from user input (default: 3 if not specified)
 - Store decisions in `workflow-session.json` including count parameter
@@ -145,7 +145,7 @@ b) {role-name} ({中文名})
 **Detection Mechanism** (execute first):
 ```javascript
 // Check if context-package already exists
-const contextPackagePath = `.workflow/WFS-{session-id}/.process/context-package.json`;
+const contextPackagePath = `.workflow/active/WFS-{session-id}/.process/context-package.json`;
 
 if (file_exists(contextPackagePath)) {
   // Validate package
@@ -229,7 +229,7 @@ Report completion with statistics.
 
 **Steps**:
 1. **Load Phase 0 context** (if available):
-   - Read `.workflow/WFS-{session-id}/.process/context-package.json`
+   - Read `.workflow/active/WFS-{session-id}/.process/context-package.json`
    - Extract: tech_stack, existing modules, conflict_risk, relevant files
 
 2. **Deep topic analysis** (context-aware):
@@ -449,7 +449,7 @@ FOR each selected role:
 
 ## Output Document Template
 
-**File**: `.workflow/WFS-{topic}/.brainstorming/guidance-specification.md`
+**File**: `.workflow/active/WFS-{topic}/.brainstorming/guidance-specification.md`
 
 ```markdown
 # [Project] - Confirmed Guidance Specification
@@ -596,8 +596,7 @@ ELSE:
 ## File Structure
 
 ```
-.workflow/WFS-[topic]/
-├── .active-brainstorming
+.workflow/active/WFS-[topic]/
 ├── workflow-session.json              # Session metadata ONLY
 └── .brainstorming/
     └── guidance-specification.md      # Full guidance content

.claude/commands/workflow/brainstorm/auto-parallel.md

@@ -85,7 +85,7 @@ This workflow runs **fully autonomously** once triggered. Phase 1 (artifacts) ha
 **Validation**:
 - guidance-specification.md created with confirmed decisions
 - workflow-session.json contains selected_roles[] (metadata only, no content duplication)
-- Session directory `.workflow/WFS-{topic}/.brainstorming/` exists
+- Session directory `.workflow/active/WFS-{topic}/.brainstorming/` exists
 
 **TodoWrite Update (Phase 1 SlashCommand invoked - tasks attached)**:
 ```json
@@ -132,13 +132,13 @@ Execute {role-name} analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: {role-name}
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/{role}/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/{role}/
 TOPIC: {user-provided-topic}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -148,7 +148,7 @@ TOPIC: {user-provided-topic}
 
 3. **load_session_metadata**
    - Action: Load session metadata and original user intent
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context (contains original user prompt as PRIMARY reference)
 
 4. **load_style_skill** (ONLY for ui-designer role when style_skill_package exists)
@@ -194,7 +194,7 @@ TOPIC: {user-provided-topic}
 - guidance-specification.md path
 
 **Validation**:
-- Each role creates `.workflow/WFS-{topic}/.brainstorming/{role}/analysis.md` (primary file)
+- Each role creates `.workflow/active/WFS-{topic}/.brainstorming/{role}/analysis.md` (primary file)
 - If content is large (>800 lines), may split to `analysis-1.md`, `analysis-2.md` (max 3 files total)
 - **File naming pattern**: ALL files MUST start with `analysis` prefix (use `analysis*.md` for globbing)
 - **FORBIDDEN naming**: No `recommendations.md`, `recommendations-*.md`, or any non-`analysis` prefixed files
@@ -245,7 +245,7 @@ TOPIC: {user-provided-topic}
 **Input**: `sessionId` from Phase 1
 
 **Validation**:
-- `.workflow/WFS-{topic}/.brainstorming/synthesis-specification.md` exists
+- `.workflow/active/WFS-{topic}/.brainstorming/synthesis-specification.md` exists
 - Synthesis references all role analyses
 
 **TodoWrite Update (Phase 3 SlashCommand invoked - tasks attached)**:
@@ -280,7 +280,7 @@ TOPIC: {user-provided-topic}
 ```
 Brainstorming complete for session: {sessionId}
 Roles analyzed: {count}
-Synthesis: .workflow/WFS-{topic}/.brainstorming/synthesis-specification.md
+Synthesis: .workflow/active/WFS-{topic}/.brainstorming/synthesis-specification.md
 
 ✅ Next Steps:
 1. /workflow:concept-clarify --session {sessionId}  # Optional refinement
@@ -392,31 +392,31 @@ CONTEXT_VARS:
 
 ## Session Management
 
-**⚡ FIRST ACTION**: Check for `.workflow/.active-*` markers before Phase 1
+**⚡ FIRST ACTION**: Check `.workflow/active/` for existing sessions before Phase 1
 
 **Multiple Sessions Support**:
-- Different Claude instances can have different active brainstorming sessions
-- If multiple active sessions found, prompt user to select
-- If single active session found, use it
-- If no active session exists, create `WFS-[topic-slug]`
+- Different Claude instances can have different brainstorming sessions
+- If multiple sessions found, prompt user to select
+- If single session found, use it
+- If no session exists, create `WFS-[topic-slug]`
 
 **Session Continuity**:
-- MUST use selected active session for all phases
+- MUST use selected session for all phases
 - Each role's context stored in session directory
 - Session isolation: Each session maintains independent state
 
 ## Output Structure
 
 **Phase 1 Output**:
-- `.workflow/WFS-{topic}/.brainstorming/guidance-specification.md` (framework content)
-- `.workflow/WFS-{topic}/workflow-session.json` (metadata: selected_roles[], topic, timestamps, style_skill_package)
+- `.workflow/active/WFS-{topic}/.brainstorming/guidance-specification.md` (framework content)
+- `.workflow/active/WFS-{topic}/workflow-session.json` (metadata: selected_roles[], topic, timestamps, style_skill_package)
 
 **Phase 2 Output**:
-- `.workflow/WFS-{topic}/.brainstorming/{role}/analysis.md` (one per role)
+- `.workflow/active/WFS-{topic}/.brainstorming/{role}/analysis.md` (one per role)
 - `.superdesign/design_iterations/` (ui-designer artifacts, if --style-skill provided)
 
 **Phase 3 Output**:
-- `.workflow/WFS-{topic}/.brainstorming/synthesis-specification.md` (integrated analysis)
+- `.workflow/active/WFS-{topic}/.brainstorming/synthesis-specification.md` (integrated analysis)
 
 **⚠️ Storage Separation**: Guidance content in .md files, metadata in .json (no duplication)
 **⚠️ Style References**: When --style-skill provided, workflow-session.json stores style_skill_package name, ui-designer loads from `.claude/skills/style-{package-name}/`
@@ -446,8 +446,7 @@ CONTEXT_VARS:
 
 **File Structure**:
 ```
-.workflow/WFS-[topic]/
-├── .active-brainstorming
+.workflow/active/WFS-[topic]/
 ├── workflow-session.json              # Session metadata ONLY
 └── .brainstorming/
     ├── guidance-specification.md      # Framework (Phase 1)

.claude/commands/workflow/brainstorm/data-architect.md

@@ -47,10 +47,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -87,13 +87,13 @@ Execute data-architect analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: data-architect
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/data-architect/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/data-architect/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -103,7 +103,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -163,7 +163,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/data-architect/
+.workflow/active/WFS-{session}/.brainstorming/data-architect/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -208,7 +208,7 @@ TodoWrite({
   "data_architect": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/data-architect/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/data-architect/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/commands/workflow/brainstorm/product-manager.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute product-manager analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: product-manager
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/product-manager/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/product-manager/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/product-manager/
+.workflow/active/WFS-{session}/.brainstorming/product-manager/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "product_manager": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/product-manager/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/product-manager/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/commands/workflow/brainstorm/product-owner.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute product-owner analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: product-owner
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/product-owner/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/product-owner/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/product-owner/
+.workflow/active/WFS-{session}/.brainstorming/product-owner/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "product_owner": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/product-owner/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/product-owner/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/commands/workflow/brainstorm/scrum-master.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute scrum-master analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: scrum-master
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/scrum-master/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/scrum-master/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/scrum-master/
+.workflow/active/WFS-{session}/.brainstorming/scrum-master/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "scrum_master": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/scrum-master/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/scrum-master/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/commands/workflow/brainstorm/subject-matter-expert.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute subject-matter-expert analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: subject-matter-expert
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/subject-matter-expert/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/subject-matter-expert/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/subject-matter-expert/
+.workflow/active/WFS-{session}/.brainstorming/subject-matter-expert/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "subject_matter_expert": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/subject-matter-expert/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/subject-matter-expert/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/commands/workflow/brainstorm/synthesis.md

@@ -48,7 +48,7 @@ Three-phase workflow to eliminate ambiguities and enhance conceptual depth in ro
 
 ### Phase 1: Discovery & Validation
 
-1. **Detect Session**: Use `--session` parameter or `.workflow/.active-*` marker
+1. **Detect Session**: Use `--session` parameter or find `.workflow/active/WFS-*` directories
 2. **Validate Files**:
    - `guidance-specification.md` (optional, warn if missing)
    - `*/analysis*.md` (required, error if empty)
@@ -59,7 +59,7 @@ Three-phase workflow to eliminate ambiguities and enhance conceptual depth in ro
 **Main flow prepares file paths for Agent**:
 
 1. **Discover Analysis Files**:
-   - Glob(.workflow/WFS-{session}/.brainstorming/*/analysis*.md)
+   - Glob(.workflow/active/WFS-{session}/.brainstorming/*/analysis*.md)
    - Supports: analysis.md, analysis-1.md, analysis-2.md, analysis-3.md
    - Validate: At least one file exists (error if empty)
 
@@ -69,7 +69,7 @@ Three-phase workflow to eliminate ambiguities and enhance conceptual depth in ro
 
 3. **Pass to Agent** (Phase 3):
    - `session_id`
-   - `brainstorm_dir`: .workflow/WFS-{session}/.brainstorming/
+   - `brainstorm_dir`: .workflow/active/WFS-{session}/.brainstorming/
    - `role_analysis_paths`: ["product-manager/analysis.md", "system-architect/analysis-1.md", ...]
    - `participating_roles`: ["product-manager", "system-architect", ...]
 
@@ -361,7 +361,7 @@ Updated {role2}/analysis.md with Clarifications section + enhanced content
 
 ## Output
 
-**Location**: `.workflow/WFS-{session}/.brainstorming/[role]/analysis*.md` (in-place updates)
+**Location**: `.workflow/active/WFS-{session}/.brainstorming/[role]/analysis*.md` (in-place updates)
 
 **Updated Structure**:
 ```markdown
@@ -381,6 +381,64 @@ Updated {role2}/analysis.md with Clarifications section + enhanced content
 - Ambiguities resolved, placeholders removed
 - Consistent terminology
 
+### Phase 6: Update Context Package
+
+**Purpose**: Sync updated role analyses to context-package.json to avoid stale cache
+
+**Operations**:
+```bash
+context_pkg_path = ".workflow/active/WFS-{session}/.process/context-package.json"
+
+# 1. Read existing package
+context_pkg = Read(context_pkg_path)
+
+# 2. Re-read brainstorm artifacts (now with synthesis enhancements)
+brainstorm_dir = ".workflow/active/WFS-{session}/.brainstorming"
+
+# 2.1 Update guidance-specification if exists
+IF exists({brainstorm_dir}/guidance-specification.md):
+    context_pkg.brainstorm_artifacts.guidance_specification.content = Read({brainstorm_dir}/guidance-specification.md)
+    context_pkg.brainstorm_artifacts.guidance_specification.updated_at = NOW()
+
+# 2.2 Update synthesis-specification if exists
+IF exists({brainstorm_dir}/synthesis-specification.md):
+    IF context_pkg.brainstorm_artifacts.synthesis_output:
+        context_pkg.brainstorm_artifacts.synthesis_output.content = Read({brainstorm_dir}/synthesis-specification.md)
+        context_pkg.brainstorm_artifacts.synthesis_output.updated_at = NOW()
+
+# 2.3 Re-read all role analysis files
+role_analysis_files = Glob({brainstorm_dir}/*/analysis*.md)
+context_pkg.brainstorm_artifacts.role_analyses = []
+
+FOR file IN role_analysis_files:
+    role_name = extract_role_from_path(file)  # e.g., "ui-designer"
+    relative_path = file.replace({brainstorm_dir}/, "")
+
+    context_pkg.brainstorm_artifacts.role_analyses.push({
+        "role": role_name,
+        "files": [{
+            "path": relative_path,
+            "type": "primary",
+            "content": Read(file),
+            "updated_at": NOW()
+        }]
+    })
+
+# 3. Update metadata
+context_pkg.metadata.updated_at = NOW()
+context_pkg.metadata.synthesis_timestamp = NOW()
+
+# 4. Write back
+Write(context_pkg_path, JSON.stringify(context_pkg, indent=2))
+
+REPORT: "✅ Updated context-package.json with synthesis results"
+```
+
+**TodoWrite Update**:
+```json
+{"content": "Update context package with synthesis results", "status": "completed", "activeForm": "Updating context package"}
+```
+
 ## Session Metadata
 
 Update `workflow-session.json`:

.claude/commands/workflow/brainstorm/system-architect.md

@@ -46,10 +46,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -162,7 +162,7 @@ IF update_mode = "incremental":
 
 ### Output Files
 ```
-.workflow/WFS-[topic]/.brainstorming/
+.workflow/active/WFS-[topic]/.brainstorming/
 ├── guidance-specification.md          # Input: Framework (if exists)
 └── system-architect/
     └── analysis.md            # ★ OUTPUT: Framework-based analysis
@@ -186,8 +186,8 @@ IF update_mode = "incremental":
 ### ⚠️ Session Management - FIRST STEP
 Session detection and selection:
 ```bash
-# Check for active sessions
-active_sessions=$(find .workflow -name ".active-*" 2>/dev/null)
+# Check for existing sessions
+existing_sessions=$(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null)
 if [ multiple_sessions ]; then
   prompt_user_to_select_session()
 else
@@ -279,7 +279,7 @@ TodoWrite tracking for two-step process:
 
 ### Output Location
 ```
-.workflow/WFS-{topic-slug}/.brainstorming/system-architect/
+.workflow/active/WFS-{topic-slug}/.brainstorming/system-architect/
 ├── analysis.md                 # Primary architecture analysis
 ├── architecture-design.md      # Detailed system design and diagrams
 ├── technology-stack.md         # Technology stack recommendations and justifications
@@ -340,7 +340,7 @@ Upon completion, update `workflow-session.json`:
       "system_architect": {
         "status": "completed",
         "completed_at": "timestamp",
-        "output_directory": ".workflow/WFS-{topic}/.brainstorming/system-architect/",
+        "output_directory": ".workflow/active/WFS-{topic}/.brainstorming/system-architect/",
         "key_insights": ["scalability_bottleneck", "architecture_pattern", "technology_recommendation"]
       }
     }

.claude/commands/workflow/brainstorm/ui-designer.md

@@ -48,10 +48,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -88,13 +88,13 @@ Execute ui-designer analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: ui-designer
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/ui-designer/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/ui-designer/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -104,7 +104,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -164,7 +164,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/ui-designer/
+.workflow/active/WFS-{session}/.brainstorming/ui-designer/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -209,7 +209,7 @@ TodoWrite({
   "ui_designer": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/ui-designer/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/ui-designer/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/commands/workflow/brainstorm/ux-expert.md

@@ -48,10 +48,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -88,13 +88,13 @@ Execute ux-expert analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: ux-expert
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/ux-expert/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/ux-expert/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -104,7 +104,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -164,7 +164,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/ux-expert/
+.workflow/active/WFS-{session}/.brainstorming/ux-expert/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -209,7 +209,7 @@ TodoWrite({
   "ux_expert": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/ux-expert/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/ux-expert/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/commands/workflow/execute.md

@@ -54,13 +54,64 @@ Orchestrates autonomous workflow execution through systematic task discovery, ag
 ### Phase 1: Discovery
 **Applies to**: Normal mode only (skipped in resume mode)
 
-**Process**:
-1. **Check Active Sessions**: Find `.workflow/.active-*` markers
-2. **Select Session**: If multiple found, prompt user selection
-3. **Load Session Metadata**: Read `workflow-session.json` ONLY (minimal context)
-4. **DO NOT read task JSONs yet** - defer until execution phase
+**Purpose**: Find and select active workflow session with user confirmation when multiple sessions exist
 
-**Resume Mode**: This phase is completely skipped when `--resume-session="session-id"` flag is provided.
+**Process**:
+
+#### Step 1.1: Count Active Sessions
+```bash
+bash(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null | wc -l)
+```
+
+#### Step 1.2: Handle Session Selection
+
+**Case A: No Sessions** (count = 0)
+```
+ERROR: No active workflow sessions found
+Run /workflow:plan "task description" to create a session
+```
+
+**Case B: Single Session** (count = 1)
+```bash
+bash(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null | head -1 | xargs basename)
+```
+Auto-select and continue to Phase 2.
+
+**Case C: Multiple Sessions** (count > 1)
+
+List sessions with metadata and prompt user selection:
+```bash
+bash(for dir in .workflow/active/WFS-*/; do
+  session=$(basename "$dir")
+  project=$(jq -r '.project // "Unknown"' "$dir/workflow-session.json" 2>/dev/null)
+  total=$(grep -c "^- \[" "$dir/TODO_LIST.md" 2>/dev/null || echo "0")
+  completed=$(grep -c "^- \[x\]" "$dir/TODO_LIST.md" 2>/dev/null || echo "0")
+  [ "$total" -gt 0 ] && progress=$((completed * 100 / total)) || progress=0
+  echo "${session} | ${project} | ${completed}/${total} tasks (${progress}%)"
+done)
+```
+
+Use AskUserQuestion to present formatted options:
+```
+Multiple active workflow sessions detected. Please select one:
+
+1. WFS-auth-system | Authentication System | 3/5 tasks (60%)
+2. WFS-payment-module | Payment Integration | 0/8 tasks (0%)
+
+Enter number, full session ID, or partial match:
+```
+
+Parse user input (supports: number "1", full ID "WFS-auth-system", or partial "auth"), validate selection, and continue to Phase 2.
+
+#### Step 1.3: Load Session Metadata
+```bash
+bash(cat .workflow/active/${sessionId}/workflow-session.json)
+```
+
+**Output**: Store session metadata in memory
+**DO NOT read task JSONs yet** - defer until execution phase (lazy loading)
+
+**Resume Mode**: This entire phase is skipped when `--resume-session="session-id"` flag is provided.
 
 ### Phase 2: Planning Document Analysis
 **Applies to**: Normal mode only (skipped in resume mode)
@@ -92,7 +143,7 @@ Orchestrates autonomous workflow execution through systematic task discovery, ag
 4. **Validate Prerequisites**: Ensure IMPL_PLAN.md and TODO_LIST.md exist and are valid
 
 **Resume Mode Behavior**:
-- Load existing TODO_LIST.md directly from `.workflow/{session-id}/`
+- Load existing TODO_LIST.md directly from `.workflow/active//{session-id}/`
 - Extract current progress from TODO_LIST.md
 - Generate TodoWrite from TODO_LIST.md state
 - Proceed immediately to agent execution (Phase 4)
@@ -118,7 +169,7 @@ If IMPL_PLAN.md lacks execution strategy, use intelligent fallback (analyze task
 ```
 while (TODO_LIST.md has pending tasks) {
   next_task_id = getTodoWriteInProgressTask()
-  task_json = Read(.workflow/{session}/.task/{next_task_id}.json)  // Lazy load
+  task_json = Read(.workflow/session/{session}/.task/{next_task_id}.json)  // Lazy load
   executeTaskWithAgent(task_json)
   updateTodoListMarkCompleted(next_task_id)
   advanceTodoWriteToNextTask()
@@ -322,11 +373,11 @@ TodoWrite({
     }
   },
   "session": {
-    "workflow_dir": ".workflow/WFS-session/",
-    "context_package_path": ".workflow/WFS-session/.process/context-package.json",
-    "todo_list_path": ".workflow/WFS-session/TODO_LIST.md",
-    "summaries_dir": ".workflow/WFS-session/.summaries/",
-    "task_json_path": ".workflow/WFS-session/.task/IMPL-1.1.json"
+    "workflow_dir": ".workflow/active/WFS-session/",
+    "context_package_path": ".workflow/active/WFS-session/.process/context-package.json",
+    "todo_list_path": ".workflow/active/WFS-session/TODO_LIST.md",
+    "summaries_dir": ".workflow/active/WFS-session/.summaries/",
+    "task_json_path": ".workflow/active/WFS-session/.task/IMPL-1.1.json"
   },
   "dependencies": [ /* Task summaries from depends_on */ ],
   "inherited": { /* Parent task context */ }
@@ -452,7 +503,7 @@ Task(subagent_type="{meta.agent}",
         "step": "load_synthesis_specification",
         "action": "Load synthesis specification from context-package.json",
         "commands": [
-          "Read(.workflow/WFS-[session]/.process/context-package.json)",
+          "Read(.workflow/active/WFS-[session]/.process/context-package.json)",
           "Extract(brainstorm_artifacts.synthesis_output.path)",
           "Read(extracted path)"
         ],
@@ -514,7 +565,7 @@ meta.agent missing → Infer from meta.type:
 
 ## Workflow File Structure Reference
 ```
-.workflow/WFS-[topic-slug]/
+.workflow/active/WFS-[topic-slug]/
 ├── workflow-session.json     # Session state and metadata
 ├── IMPL_PLAN.md             # Planning document and requirements
 ├── TODO_LIST.md             # Progress tracking (auto-updated)
@@ -536,8 +587,8 @@ meta.agent missing → Infer from meta.type:
 | Error Type | Cause | Recovery Strategy | Max Attempts |
 |-----------|-------|------------------|--------------|
 | **Discovery Errors** |
-| No active session | No `.active-*` markers found | Create or resume session: `/workflow:plan "project"` | N/A |
-| Multiple sessions | Multiple `.active-*` markers | Prompt user selection | N/A |
+| No active session | No sessions in `.workflow/active/` | Create or resume session: `/workflow:plan "project"` | N/A |
+| Multiple sessions | Multiple sessions in `.workflow/active/` | Prompt user selection | N/A |
 | Corrupted session | Invalid JSON files | Recreate session structure or validate files | N/A |
 | **Execution Errors** |
 | Agent failure | Agent crash/timeout | Retry with simplified context | 2 |
@@ -557,26 +608,23 @@ meta.agent missing → Infer from meta.type:
 **Session Recovery**:
 ```bash
 # Check session integrity
-find .workflow -name ".active-*" | while read marker; do
-  session=$(basename "$marker" | sed 's/^\.active-//')
-  [ ! -d ".workflow/$session" ] && rm "$marker"
+find .workflow/active/ -name "WFS-*" -type d | while read session_dir; do
+  session=$(basename "$session_dir")
+  [ ! -f "$session_dir/workflow-session.json" ] && \
+    echo '{"session_id":"'$session'","status":"active"}' > "$session_dir/workflow-session.json"
 done
-
-# Recreate corrupted session files
-[ ! -f ".workflow/$session/workflow-session.json" ] && \
-  echo '{"session_id":"'$session'","status":"active"}' > ".workflow/$session/workflow-session.json"
 ```
 
 **Task Recovery**:
 ```bash
 # Validate task JSON integrity
-for task_file in .workflow/$session/.task/*.json; do
+for task_file in .workflow/active/$session/.task/*.json; do
   jq empty "$task_file" 2>/dev/null || echo "Corrupted: $task_file"
 done
 
 # Fix missing dependencies
-missing_deps=$(jq -r '.context.depends_on[]?' .workflow/$session/.task/*.json | sort -u)
+missing_deps=$(jq -r '.context.depends_on[]?' .workflow/active/$session/.task/*.json | sort -u)
 for dep in $missing_deps; do
-  [ ! -f ".workflow/$session/.task/$dep.json" ] && echo "Missing dependency: $dep"
+  [ ! -f ".workflow/active/$session/.task/$dep.json" ] && echo "Missing dependency: $dep"
 done
 ```

.claude/commands/workflow/init.md

@@ -0,0 +1,564 @@
+---
+name: init
+description: Initialize project-level state with intelligent project analysis using cli-explore-agent
+argument-hint: "[--regenerate]"
+examples:
+  - /workflow:init
+  - /workflow:init --regenerate
+---
+
+# Workflow Init Command (/workflow:init)
+
+## Overview
+Initializes `.workflow/project.json` with comprehensive project understanding by leveraging **cli-explore-agent** for intelligent analysis and **memory discovery** for SKILL package indexing.
+
+**Key Features**:
+- **Intelligent Project Analysis**: Uses cli-explore-agent's Deep Scan mode
+- **Technology Stack Detection**: Identifies languages, frameworks, build tools
+- **Architecture Overview**: Discovers patterns, layers, key components
+- **Memory Discovery**: Scans and indexes available SKILL packages
+- **Smart Recommendations**: Suggests memory commands based on project state
+- **One-time Initialization**: Skips if project.json exists (unless --regenerate)
+
+## Usage
+```bash
+/workflow:init                 # Initialize project state (skip if exists)
+/workflow:init --regenerate    # Force regeneration of project.json
+```
+
+## Implementation Flow
+
+### Step 1: Check Existing State
+
+```bash
+# Check if project.json already exists
+bash(test -f .workflow/project.json && echo "EXISTS" || echo "NOT_FOUND")
+```
+
+**If EXISTS and no --regenerate flag**:
+```
+Project already initialized at .workflow/project.json
+Use /workflow:init --regenerate to rebuild project analysis
+Use /workflow:status --project to view current state
+```
+
+**If NOT_FOUND or --regenerate flag**: Proceed to initialization
+
+### Step 2: Project Discovery
+
+```bash
+# Get project name and root
+bash(basename "$(git rev-parse --show-toplevel 2>/dev/null || pwd)")
+bash(git rev-parse --show-toplevel 2>/dev/null || pwd)
+
+# Create .workflow directory
+bash(mkdir -p .workflow)
+```
+
+### Step 3: Intelligent Project Analysis
+
+**Invoke cli-explore-agent** with Deep Scan mode for comprehensive understanding:
+
+```javascript
+Task(
+  subagent_type="cli-explore-agent",
+  description="Deep project analysis",
+  prompt=`
+Analyze project structure and technology stack for workflow initialization.
+
+## Analysis Objective
+Perform Deep Scan analysis to build comprehensive project understanding for .workflow/project.json initialization.
+
+## Required Analysis
+
+### 1. Technology Stack Detection
+- **Primary Languages**: Identify all programming languages with file counts
+- **Frameworks**: Detect web frameworks (React, Vue, Express, Django, etc.)
+- **Build Tools**: Identify build systems (npm, cargo, maven, gradle, etc.)
+- **Test Frameworks**: Find testing tools (jest, pytest, go test, etc.)
+
+### 2. Project Architecture
+- **Architecture Style**: Identify patterns (MVC, microservices, monorepo, etc.)
+- **Layer Structure**: Discover architectural layers (presentation, business, data)
+- **Design Patterns**: Find common patterns (singleton, factory, repository, etc.)
+- **Key Components**: List 5-10 core modules/components with brief descriptions
+
+### 3. Project Metrics
+- **Total Files**: Count source code files
+- **Lines of Code**: Estimate total LOC
+- **Module Count**: Number of top-level modules/packages
+- **Complexity**: Overall complexity rating (low/medium/high)
+
+### 4. Entry Points
+- **Main Entry**: Identify primary application entry point(s)
+- **CLI Commands**: Discover available commands/scripts
+- **API Endpoints**: Find HTTP/REST/GraphQL endpoints (if applicable)
+
+## Execution Mode
+Use **Deep Scan** with Dual-Source Strategy:
+- Phase 1: Bash structural scan (fast pattern discovery)
+- Phase 2: Gemini semantic analysis (design intent, patterns)
+- Phase 3: Synthesis (merge findings with attribution)
+
+## Analysis Scope
+- Root directory: ${projectRoot}
+- Exclude: node_modules, dist, build, .git, vendor, __pycache__
+- Focus: Source code directories (src, lib, pkg, app, etc.)
+
+## Output Format
+Return JSON structure for programmatic processing:
+
+\`\`\`json
+{
+  "technology_stack": {
+    "languages": [
+      {"name": "TypeScript", "file_count": 150, "primary": true},
+      {"name": "Python", "file_count": 30, "primary": false}
+    ],
+    "frameworks": ["React", "Express", "TypeORM"],
+    "build_tools": ["npm", "webpack"],
+    "test_frameworks": ["Jest", "Supertest"]
+  },
+  "architecture": {
+    "style": "Layered MVC with Repository Pattern",
+    "layers": ["presentation", "business-logic", "data-access"],
+    "patterns": ["MVC", "Repository Pattern", "Dependency Injection"],
+    "key_components": [
+      {
+        "name": "Authentication Module",
+        "path": "src/auth",
+        "description": "JWT-based authentication with OAuth2 support",
+        "importance": "high"
+      },
+      {
+        "name": "User Management",
+        "path": "src/users",
+        "description": "User CRUD operations and profile management",
+        "importance": "high"
+      }
+    ]
+  },
+  "metrics": {
+    "total_files": 180,
+    "lines_of_code": 15000,
+    "module_count": 12,
+    "complexity": "medium"
+  },
+  "entry_points": {
+    "main": "src/index.ts",
+    "cli_commands": ["npm start", "npm test", "npm run build"],
+    "api_endpoints": ["/api/auth", "/api/users", "/api/posts"]
+  },
+  "analysis_metadata": {
+    "timestamp": "2025-01-18T10:30:00Z",
+    "mode": "deep-scan",
+    "source": "cli-explore-agent"
+  }
+}
+\`\`\`
+
+## Quality Requirements
+- ✅ All technology stack items verified (no guessing)
+- ✅ Key components include file paths for navigation
+- ✅ Architecture style based on actual code patterns, not assumptions
+- ✅ Metrics calculated from actual file counts/lines
+- ✅ Entry points verified as executable
+  `
+)
+```
+
+**Agent Output**: JSON structure with comprehensive project analysis
+
+### Step 4: Build project.json from Analysis
+
+**Data Processing**:
+```javascript
+// Parse agent analysis output
+const analysis = JSON.parse(agentOutput);
+
+// Build complete project.json structure
+const projectMeta = {
+  // Basic metadata
+  project_name: projectName,
+  initialized_at: new Date().toISOString(),
+
+  // Project overview (from cli-explore-agent)
+  overview: {
+    description: generateDescription(analysis), // e.g., "TypeScript web application with React frontend"
+    technology_stack: analysis.technology_stack,
+    architecture: {
+      style: analysis.architecture.style,
+      layers: analysis.architecture.layers,
+      patterns: analysis.architecture.patterns
+    },
+    key_components: analysis.architecture.key_components,
+    entry_points: analysis.entry_points,
+    metrics: analysis.metrics
+  },
+
+  // Feature registry (initially empty, populated by complete)
+  features: [],
+
+  // Statistics
+  statistics: {
+    total_features: 0,
+    total_sessions: 0,
+    last_updated: new Date().toISOString()
+  },
+
+  // Analysis metadata
+  _metadata: {
+    initialized_by: "cli-explore-agent",
+    analysis_timestamp: analysis.analysis_metadata.timestamp,
+    analysis_mode: analysis.analysis_metadata.mode
+  }
+};
+
+// Helper: Generate project description
+function generateDescription(analysis) {
+  const primaryLang = analysis.technology_stack.languages.find(l => l.primary);
+  const frameworks = analysis.technology_stack.frameworks.slice(0, 2).join(', ');
+
+  return `${primaryLang.name} project using ${frameworks}`;
+}
+
+// Write to .workflow/project.json
+Write('.workflow/project.json', JSON.stringify(projectMeta, null, 2));
+```
+
+### Step 5: Output Summary
+
+```
+✓ Project initialized successfully
+
+## Project Overview
+Name: ${projectName}
+Description: ${overview.description}
+
+### Technology Stack
+Languages: ${languages.map(l => l.name).join(', ')}
+Frameworks: ${frameworks.join(', ')}
+
+### Architecture
+Style: ${architecture.style}
+Components: ${key_components.length} core modules identified
+
+### Project Metrics
+Files: ${metrics.total_files}
+LOC: ${metrics.lines_of_code}
+Complexity: ${metrics.complexity}
+
+### Memory Resources
+SKILL Packages: ${memory_resources.skills.length}
+Documentation: ${memory_resources.documentation.length} project(s)
+Module Docs: ${memory_resources.module_docs.length} file(s)
+Gaps: ${memory_resources.gaps.join(', ') || 'none'}
+
+## Quick Start
+• /workflow:plan "feature description" - Start new workflow
+• /workflow:status --project - View project state
+
+---
+Project state saved to: .workflow/project.json
+Memory index updated: ${memory_resources.last_scanned}
+```
+
+## Extended project.json Schema
+
+### Complete Structure
+
+```json
+{
+  "project_name": "claude_dms3",
+  "initialized_at": "2025-01-18T10:00:00Z",
+
+  "overview": {
+    "description": "TypeScript workflow automation system with AI agent orchestration",
+    "technology_stack": {
+      "languages": [
+        {"name": "TypeScript", "file_count": 150, "primary": true},
+        {"name": "Bash", "file_count": 30, "primary": false}
+      ],
+      "frameworks": ["Node.js"],
+      "build_tools": ["npm"],
+      "test_frameworks": ["Jest"]
+    },
+    "architecture": {
+      "style": "Agent-based workflow orchestration with modular command system",
+      "layers": ["command-layer", "agent-orchestration", "cli-integration"],
+      "patterns": ["Command Pattern", "Agent Pattern", "Template Method"]
+    },
+    "key_components": [
+      {
+        "name": "Workflow Planning",
+        "path": ".claude/commands/workflow",
+        "description": "Multi-phase planning workflow with brainstorming and task generation",
+        "importance": "high"
+      },
+      {
+        "name": "Agent System",
+        "path": ".claude/agents",
+        "description": "Specialized agents for code development, testing, documentation",
+        "importance": "high"
+      },
+      {
+        "name": "CLI Tool Integration",
+        "path": ".claude/scripts",
+        "description": "Gemini, Qwen, Codex wrapper scripts for AI-powered analysis",
+        "importance": "medium"
+      }
+    ],
+    "entry_points": {
+      "main": ".claude/commands/workflow/plan.md",
+      "cli_commands": ["/workflow:plan", "/workflow:execute", "/memory:docs"],
+      "api_endpoints": []
+    },
+    "metrics": {
+      "total_files": 180,
+      "lines_of_code": 15000,
+      "module_count": 12,
+      "complexity": "medium"
+    }
+  },
+
+  "features": [],
+
+  "statistics": {
+    "total_features": 0,
+    "total_sessions": 0,
+    "last_updated": "2025-01-18T10:00:00Z"
+  },
+
+  "memory_resources": {
+    "skills": [
+      {"name": "claude_dms3", "type": "project_docs", "path": ".claude/skills/claude_dms3"},
+      {"name": "workflow-progress", "type": "workflow_progress", "path": ".claude/skills/workflow-progress"}
+    ],
+    "documentation": [
+      {
+        "name": "claude_dms3",
+        "path": ".workflow/docs/claude_dms3",
+        "has_readme": true,
+        "has_architecture": true
+      }
+    ],
+    "module_docs": [
+      ".claude/commands/workflow/CLAUDE.md",
+      ".claude/agents/CLAUDE.md"
+    ],
+    "gaps": ["tech_stack"],
+    "last_scanned": "2025-01-18T10:05:00Z"
+  },
+
+  "_metadata": {
+    "initialized_by": "cli-explore-agent",
+    "analysis_timestamp": "2025-01-18T10:00:00Z",
+    "analysis_mode": "deep-scan",
+    "memory_scan_timestamp": "2025-01-18T10:05:00Z"
+  }
+}
+```
+
+### Phase 5: Discover Memory Resources
+
+**Goal**: Scan and index available SKILL packages (memory command products) using agent delegation
+
+**Invoke general-purpose agent** to discover and catalog all memory products:
+
+```javascript
+Task(
+  subagent_type="general-purpose",
+  description="Discover memory resources",
+  prompt=`
+Discover and index all memory command products: SKILL packages, documentation, and CLAUDE.md files.
+
+## Discovery Scope
+1. **SKILL Packages** (.claude/skills/) - Generated by /memory:skill-memory, /memory:tech-research, etc.
+2. **Documentation** (.workflow/docs/) - Generated by /memory:docs
+3. **Module Docs** (**/CLAUDE.md) - Generated by /memory:update-full, /memory:update-related
+
+## Discovery Tasks
+
+### 1. Scan SKILL Packages
+- List all directories in .claude/skills/
+- For each: extract name, classify type, record path
+- Types: workflow-progress | codemap-* | style-* | tech_stacks | project_docs
+
+### 2. Scan Documentation
+- List directories in .workflow/docs/
+- For each project: name, path, check README.md, ARCHITECTURE.md existence
+
+### 3. Scan CLAUDE.md Files
+- Find all **/CLAUDE.md (exclude: node_modules, .git, dist, build)
+- Return path list only
+
+### 4. Identify Gaps
+- No project SKILL? → "project_skill"
+- No documentation? → "documentation"
+- Missing tech stack SKILL? → "tech_stack"
+- No workflow-progress? → "workflow_history"
+- <10% modules have CLAUDE.md? → "module_docs_low_coverage"
+
+### 5. Return JSON:
+{
+  "skills": [
+    {"name": "claude_dms3", "type": "project_docs", "path": ".claude/skills/claude_dms3"},
+    {"name": "workflow-progress", "type": "workflow_progress", "path": ".claude/skills/workflow-progress"}
+  ],
+  "documentation": [
+    {
+      "name": "my_project",
+      "path": ".workflow/docs/my_project",
+      "has_readme": true,
+      "has_architecture": true
+    }
+  ],
+  "module_docs": [
+    "src/core/CLAUDE.md",
+    "lib/utils/CLAUDE.md"
+  ],
+  "gaps": ["tech_stack", "module_docs_low_coverage"]
+}
+
+## Context
+- Project tech stack: ${JSON.stringify(analysis.technology_stack)}
+- Check .workflow/.archives for session history
+- If directories missing, return empty state with recommendations
+  `
+)
+```
+
+**Agent Output**: JSON structure with skills, documentation, module_docs, and gaps
+
+**Update project.json**:
+```javascript
+const memoryDiscovery = JSON.parse(agentOutput);
+
+projectMeta.memory_resources = {
+  ...memoryDiscovery,
+  last_scanned: new Date().toISOString()
+};
+
+Write('.workflow/project.json', JSON.stringify(projectMeta, null, 2));
+```
+
+**Output Summary**:
+```
+Memory Resources Indexed:
+- SKILL Packages: ${skills.length}
+- Documentation: ${documentation.length} project(s)
+- Module Docs: ${module_docs.length} file(s)
+- Gaps: ${gaps.join(', ') || 'none'}
+```
+
+---
+
+## Regeneration Behavior
+
+When using `--regenerate` flag:
+
+1. **Backup existing file**:
+   ```bash
+   bash(cp .workflow/project.json .workflow/project.json.backup)
+   ```
+
+2. **Preserve features array**:
+   ```javascript
+   const existingMeta = JSON.parse(Read('.workflow/project.json'));
+   const preservedFeatures = existingMeta.features || [];
+   const preservedStats = existingMeta.statistics || {};
+   ```
+
+3. **Re-run cli-explore-agent analysis**
+
+4. **Re-run memory discovery (Phase 5)**
+
+5. **Merge preserved data with new analysis**:
+   ```javascript
+   const newProjectMeta = {
+     ...analysisResults,
+     features: preservedFeatures,        // Keep existing features
+     statistics: preservedStats          // Keep statistics
+   };
+   ```
+
+6. **Output**:
+   ```
+   ✓ Project analysis regenerated
+   Backup saved: .workflow/project.json.backup
+
+   Updated:
+   - Technology stack analysis
+   - Architecture overview
+   - Key components discovery
+   - Memory resources index
+
+   Preserved:
+   - ${preservedFeatures.length} existing features
+   - Session statistics
+   ```
+
+## Error Handling
+
+### Agent Failure
+```
+If cli-explore-agent fails:
+1. Fall back to basic initialization
+2. Use get_modules_by_depth.sh for structure
+3. Create minimal project.json with placeholder overview
+4. Log warning: "Project initialized with basic analysis. Run /workflow:init --regenerate for full analysis"
+```
+
+### Missing Tools
+```
+If Gemini CLI unavailable:
+1. Agent uses Qwen fallback
+2. If both fail, use bash-only analysis
+3. Mark in _metadata: "analysis_mode": "bash-fallback"
+```
+
+### Invalid Project Root
+```
+If not in git repo and empty directory:
+1. Warn user: "Empty project detected"
+2. Create minimal project.json
+3. Suggest: "Add code files and run /workflow:init --regenerate"
+```
+
+### Memory Discovery Failures
+
+**Missing Directories**:
+```
+If .claude/skills, .workflow/docs, or CLAUDE.md files not found:
+1. Return empty state for that category
+2. Mark in gaps.missing array
+3. Continue initialization
+```
+
+**Metadata Read Failures**:
+```
+If SKILL.md files are unreadable:
+1. Include SKILL with basic info: name (from directory), type (inferred), path
+2. Log warning: "SKILL package {name} has invalid metadata"
+3. Continue with other SKILLs
+```
+
+**Coverage Check Failures**:
+```
+If unable to determine module doc coverage:
+1. Skip adding "module_docs_low_coverage" to gaps
+2. Continue with other gap checks
+```
+
+**Default Empty State**:
+```json
+{
+  "memory_resources": {
+    "skills": [],
+    "documentation": [],
+    "module_docs": [],
+    "gaps": ["project_skill", "documentation", "tech_stack", "workflow_history", "module_docs"],
+    "last_scanned": "ISO_TIMESTAMP"
+  }
+}
+```

.claude/commands/workflow/lite-execute.md

@@ -185,86 +185,104 @@ Execution Complete
 previousExecutionResults = []
 ```
 
-### Step 2: Create TodoWrite Execution List
+### Step 2: Task Grouping & Batch Creation
 
-**Operations**:
-- Create execution tracking from task list
-- Typically single execution call for all tasks
-- Split into multiple calls if task list very large (>10 tasks)
-
-**Execution Call Creation**:
+**Dependency Analysis & Grouping Algorithm**:
 ```javascript
-function createExecutionCalls(tasks) {
-  const taskTitles = tasks.map(t => t.title || t)
+// Infer dependencies: same file → sequential, keywords (use/integrate) → sequential
+function inferDependencies(tasks) {
+  return tasks.map((task, i) => {
+    const deps = []
+    const file = task.file || task.title.match(/in\s+([^\s:]+)/)?.[1]
+    const keywords = (task.description || task.title).toLowerCase()
 
-  // Single call for ≤10 tasks (most common)
-  if (tasks.length <= 10) {
-    return [{
-      method: executionMethod === "Codex" ? "Codex" : "Agent",
-      taskSummary: taskTitles.length <= 3
-        ? taskTitles.join(', ')
-        : `${taskTitles.slice(0, 2).join(', ')}, and ${taskTitles.length - 2} more`,
-      tasks: tasks
-    }]
-  }
-
-  // Split into multiple calls for >10 tasks
-  const callSize = 5
-  const calls = []
-  for (let i = 0; i < tasks.length; i += callSize) {
-    const batchTasks = tasks.slice(i, i + callSize)
-    const batchTitles = batchTasks.map(t => t.title || t)
-    calls.push({
-      method: executionMethod === "Codex" ? "Codex" : "Agent",
-      taskSummary: `Tasks ${i + 1}-${Math.min(i + callSize, tasks.length)}: ${batchTitles[0]}...`,
-      tasks: batchTasks
-    })
-  }
-  return calls
+    for (let j = 0; j < i; j++) {
+      const prevFile = tasks[j].file || tasks[j].title.match(/in\s+([^\s:]+)/)?.[1]
+      if (file && prevFile === file) deps.push(j)  // Same file
+      else if (/use|integrate|call|import/.test(keywords)) deps.push(j)  // Keyword dependency
+    }
+    return { ...task, taskIndex: i, dependencies: deps }
+  })
 }
 
-// Create execution calls with IDs
-executionCalls = createExecutionCalls(planObject.tasks).map((call, index) => ({
-  ...call,
-  id: `[${call.method}-${index+1}]`
-}))
+// Group into batches: independent → parallel [P1,P2...], dependent → sequential [S1,S2...]
+function createExecutionCalls(tasks, executionMethod) {
+  const tasksWithDeps = inferDependencies(tasks)
+  const maxBatch = executionMethod === "Codex" ? 4 : 7
+  const calls = []
+  const processed = new Set()
+
+  // Parallel: independent tasks, different files, max batch size
+  const parallelGroups = []
+  tasksWithDeps.forEach(t => {
+    if (t.dependencies.length === 0 && !processed.has(t.taskIndex)) {
+      const group = [t]
+      processed.add(t.taskIndex)
+      tasksWithDeps.forEach(o => {
+        if (!o.dependencies.length && !processed.has(o.taskIndex) &&
+            group.length < maxBatch && t.file !== o.file) {
+          group.push(o)
+          processed.add(o.taskIndex)
+        }
+      })
+      parallelGroups.push(group)
+    }
+  })
+
+  // Sequential: dependent tasks, batch when deps satisfied
+  const remaining = tasksWithDeps.filter(t => !processed.has(t.taskIndex))
+  while (remaining.length > 0) {
+    const batch = remaining.filter((t, i) =>
+      i < maxBatch && t.dependencies.every(d => processed.has(d))
+    )
+    if (!batch.length) break
+    batch.forEach(t => processed.add(t.taskIndex))
+    calls.push({ executionType: "sequential", groupId: `S${calls.length + 1}`, tasks: batch })
+    remaining.splice(0, remaining.length, ...remaining.filter(t => !processed.has(t.taskIndex)))
+  }
+
+  // Combine results
+  return [
+    ...parallelGroups.map((g, i) => ({
+      method: executionMethod, executionType: "parallel", groupId: `P${i+1}`,
+      taskSummary: g.map(t => t.title).join(' | '), tasks: g
+    })),
+    ...calls.map(c => ({ ...c, method: executionMethod, taskSummary: c.tasks.map(t => t.title).join(' → ') }))
+  ]
+}
+
+executionCalls = createExecutionCalls(planObject.tasks, executionMethod).map(c => ({ ...c, id: `[${c.groupId}]` }))
 
-// Create TodoWrite list
 TodoWrite({
-  todos: executionCalls.map(call => ({
-    content: `${call.id} (${call.taskSummary})`,
+  todos: executionCalls.map(c => ({
+    content: `${c.executionType === "parallel" ? "⚡" : "→"} ${c.id} (${c.tasks.length} tasks)`,
     status: "pending",
-    activeForm: `Executing ${call.id} (${call.taskSummary})`
+    activeForm: `Executing ${c.id}`
   }))
 })
 ```
 
-**Example Execution Lists**:
-```
-Single call (typical):
-[ ] [Agent-1] (Create AuthService, Add JWT utilities, Implement middleware)
-
-Few tasks:
-[ ] [Codex-1] (Create AuthService, Add JWT utilities, and 3 more)
-
-Large task sets (>10):
-[ ] [Agent-1] (Tasks 1-5: Create AuthService, Add JWT utilities, ...)
-[ ] [Agent-2] (Tasks 6-10: Create tests, Update docs, ...)
-```
-
 ### Step 3: Launch Execution
 
-**IMPORTANT**: CLI execution MUST run in foreground (no background execution)
-
-**Execution Loop**:
+**Execution Flow**: Parallel batches concurrently → Sequential batches in order
 ```javascript
-for (currentIndex = 0; currentIndex < executionCalls.length; currentIndex++) {
-  const currentCall = executionCalls[currentIndex]
+const parallel = executionCalls.filter(c => c.executionType === "parallel")
+const sequential = executionCalls.filter(c => c.executionType === "sequential")
 
-  // Update TodoWrite: mark current call in_progress
-  // Launch execution with previousExecutionResults context
-  // After completion: collect result, add to previousExecutionResults
-  // Update TodoWrite: mark current call completed
+// Phase 1: Launch all parallel batches (single message with multiple tool calls)
+if (parallel.length > 0) {
+  TodoWrite({ todos: executionCalls.map(c => ({ status: c.executionType === "parallel" ? "in_progress" : "pending" })) })
+  parallelResults = await Promise.all(parallel.map(c => executeBatch(c)))
+  previousExecutionResults.push(...parallelResults)
+  TodoWrite({ todos: executionCalls.map(c => ({ status: parallel.includes(c) ? "completed" : "pending" })) })
+}
+
+// Phase 2: Execute sequential batches one by one
+for (const call of sequential) {
+  TodoWrite({ todos: executionCalls.map(c => ({ status: c === call ? "in_progress" : "..." })) })
+  result = await executeBatch(call)
+  previousExecutionResults.push(result)
+  TodoWrite({ todos: executionCalls.map(c => ({ status: "completed" or "pending" })) })
 }
 ```
 
@@ -323,12 +341,17 @@ ${result.notes ? `Notes: ${result.notes}` : ''}
 
   ${clarificationContext ? `\n## Clarifications\n${JSON.stringify(clarificationContext, null, 2)}` : ''}
 
-  ## Instructions
-  - Reference original request to ensure alignment
-  - Review previous results to understand completed work
-  - Build on previous work, avoid duplication
-  - Test functionality as you implement
-  - Complete all assigned tasks
+  ${executionContext?.session?.artifacts ? `\n## Planning Artifacts
+  Detailed planning context available in:
+  ${executionContext.session.artifacts.exploration ? `- Exploration: ${executionContext.session.artifacts.exploration}` : ''}
+  - Plan: ${executionContext.session.artifacts.plan}
+  - Task: ${executionContext.session.artifacts.task}
+
+  Read these files for detailed architecture, patterns, and constraints.` : ''}
+
+  ## Requirements
+  MUST complete ALL ${planObject.tasks.length} tasks listed above in this single execution.
+  Return only after all tasks are fully implemented and tested.
   `
 )
 ```
@@ -341,6 +364,11 @@ When to use:
 - `executionMethod = "Codex"`
 - `executionMethod = "Auto" AND complexity = "Medium" or "High"`
 
+**Artifact Path Delegation**:
+- Include artifact file paths in CLI prompt for enhanced context
+- Codex can read artifact files for detailed planning information
+- Example: Reference exploration.json for architecture patterns
+
 Command format:
 ```bash
 function formatTaskForCodex(task, index) {
@@ -390,12 +418,18 @@ Constraints: ${explorationContext.constraints || 'None'}
 
 ${clarificationContext ? `\n### User Clarifications\n${Object.entries(clarificationContext).map(([q, a]) => `${q}: ${a}`).join('\n')}` : ''}
 
-## Execution Instructions
-- Reference original request to ensure alignment
-- Review previous results for context continuity
-- Build on previous work, don't duplicate completed tasks
-- Complete all assigned tasks in single execution
-- Test functionality as you implement
+${executionContext?.session?.artifacts ? `\n### Planning Artifact Files
+Detailed planning context available in session folder:
+${executionContext.session.artifacts.exploration ? `- Exploration: ${executionContext.session.artifacts.exploration}` : ''}
+- Plan: ${executionContext.session.artifacts.plan}
+- Task: ${executionContext.session.artifacts.task}
+
+Read these files for complete architecture details, code patterns, and integration constraints.
+` : ''}
+
+## Requirements
+MUST complete ALL ${planObject.tasks.length} tasks listed above in this single execution.
+Return only after all tasks are fully implemented and tested.
 
 Complexity: ${planObject.complexity}
 " --skip-git-repo-check -s danger-full-access
@@ -414,105 +448,72 @@ bash_result = Bash(
 
 **Result Collection**: After completion, analyze output and collect result following `executionResult` structure
 
-### Step 4: Track Execution Progress
+### Step 4: Progress Tracking
 
-**Real-time TodoWrite Updates** at execution call level:
-
-```javascript
-// When call starts
-TodoWrite({
-  todos: [
-    { content: "[Agent-1] (Implement auth + Create JWT utils)", status: "in_progress", activeForm: "..." },
-    { content: "[Agent-2] (Add middleware + Update routes)", status: "pending", activeForm: "..." }
-  ]
-})
-
-// When call completes
-TodoWrite({
-  todos: [
-    { content: "[Agent-1] (Implement auth + Create JWT utils)", status: "completed", activeForm: "..." },
-    { content: "[Agent-2] (Add middleware + Update routes)", status: "in_progress", activeForm: "..." }
-  ]
-})
-```
-
-**User Visibility**:
-- User sees execution call progress (not individual task progress)
-- Current execution highlighted as "in_progress"
-- Completed executions marked with checkmark
-- Each execution shows task summary for context
+Progress tracked at batch level (not individual task level). Icons: ⚡ (parallel, concurrent), → (sequential, one-by-one)
 
 ### Step 5: Code Review (Optional)
 
 **Skip Condition**: Only run if `codeReviewTool ≠ "Skip"`
 
-**Operations**:
-- Agent Review: Current agent performs direct review
-- Gemini Review: Execute gemini CLI with review prompt
-- Custom tool: Execute specified CLI tool (qwen, codex, etc.)
+**Review Focus**: Verify implementation against task.json acceptance criteria
+- Read task.json from session artifacts for acceptance criteria
+- Check each acceptance criterion is fulfilled
+- Validate code quality and identify issues
+- Ensure alignment with planned approach
 
-**Command Formats**:
+**Operations**:
+- Agent Review: Current agent performs direct review (read task.json for acceptance criteria)
+- Gemini Review: Execute gemini CLI with review prompt (task.json in CONTEXT)
+- Custom tool: Execute specified CLI tool (qwen, codex, etc.) with task.json reference
+
+**Unified Review Template** (All tools use same standard):
+
+**Review Criteria**:
+- **Acceptance Criteria**: Verify each criterion from task.json `context.acceptance`
+- **Code Quality**: Analyze quality, identify issues, suggest improvements
+- **Plan Alignment**: Validate implementation matches planned approach
+
+**Shared Prompt Template** (used by all CLI tools):
+```
+PURPOSE: Code review for implemented changes against task.json acceptance criteria
+TASK: • Verify task.json acceptance criteria fulfillment • Analyze code quality • Identify issues • Suggest improvements • Validate plan adherence
+MODE: analysis
+CONTEXT: @**/* @{task.json} @{plan.json} [@{exploration.json}] | Memory: Review lite-execute changes against task.json requirements
+EXPECTED: Quality assessment with acceptance criteria verification, issue identification, and recommendations. Explicitly check each acceptance criterion from task.json.
+RULES: $(cat ~/.claude/workflows/cli-templates/prompts/analysis/02-review-code-quality.txt) | Focus on task.json acceptance criteria and plan adherence | analysis=READ-ONLY
+```
+
+**Tool-Specific Execution** (Apply shared prompt template above):
 
 ```bash
-# Agent Review: Direct agent review (no CLI)
-# Uses analysis prompt and TodoWrite tools directly
+# Method 1: Agent Review (current agent)
+# - Read task.json: ${executionContext.session.artifacts.task}
+# - Apply unified review criteria (see Shared Prompt Template)
+# - Report findings directly
 
-# Gemini Review:
-gemini -p "
-PURPOSE: Code review for implemented changes
-TASK: • Analyze quality • Identify issues • Suggest improvements
-MODE: analysis
-CONTEXT: @**/* | Memory: Review lite-execute changes
-EXPECTED: Quality assessment with recommendations
-RULES: $(cat ~/.claude/workflows/cli-templates/prompts/analysis/02-review-code-quality.txt) | Focus on recent changes | analysis=READ-ONLY
-"
+# Method 2: Gemini Review (recommended)
+gemini -p "[Shared Prompt Template with artifacts]"
+# CONTEXT includes: @**/* @${task.json} @${plan.json} [@${exploration.json}]
 
-# Qwen Review (custom tool via "Other"):
-qwen -p "
-PURPOSE: Code review for implemented changes
-TASK: • Analyze quality • Identify issues • Suggest improvements
-MODE: analysis
-CONTEXT: @**/* | Memory: Review lite-execute changes
-EXPECTED: Quality assessment with recommendations
-RULES: $(cat ~/.claude/workflows/cli-templates/prompts/analysis/02-review-code-quality.txt) | Focus on recent changes | analysis=READ-ONLY
-"
+# Method 3: Qwen Review (alternative)
+qwen -p "[Shared Prompt Template with artifacts]"
+# Same prompt as Gemini, different execution engine
 
-# Codex Review (custom tool via "Other"):
-codex --full-auto exec "Review recent code changes for quality, potential issues, and improvements" --skip-git-repo-check -s danger-full-access
+# Method 4: Codex Review (autonomous)
+codex --full-auto exec "[Verify task.json acceptance criteria at ${task.json}]" --skip-git-repo-check -s danger-full-access
 ```
 
+**Implementation Note**: Replace `[Shared Prompt Template with artifacts]` placeholder with actual template content, substituting:
+- `@{task.json}` → `@${executionContext.session.artifacts.task}`
+- `@{plan.json}` → `@${executionContext.session.artifacts.plan}`
+- `[@{exploration.json}]` → `@${executionContext.session.artifacts.exploration}` (if exists)
+
 ## Best Practices
 
-### Execution Intelligence
-
-1. **Context Continuity**: Each execution call receives previous results
-   - Prevents duplication across multiple executions
-   - Maintains coherent implementation flow
-   - Builds on completed work
-
-2. **Execution Call Tracking**: Progress at call level, not task level
-   - Each call handles all or subset of tasks
-   - Clear visibility of current execution
-   - Simple progress updates
-
-3. **Flexible Execution**: Multiple input modes supported
-   - In-memory: Seamless lite-plan integration
-   - Prompt: Quick standalone execution
-   - File: Intelligent format detection
-     - Enhanced Task JSON (lite-plan export): Full plan extraction
-     - Plain text: Uses as prompt
-
-### Task Management
-
-1. **Live Progress Updates**: Real-time TodoWrite tracking
-   - Execution calls created before execution starts
-   - Updated as executions progress
-   - Clear completion status
-
-2. **Simple Execution**: Straightforward task handling
-   - All tasks in single call (typical)
-   - Split only for very large task sets (>10)
-   - Agent/Codex determines optimal execution order
+**Input Modes**: In-memory (lite-plan), prompt (standalone), file (JSON/text)
+**Batch Limits**: Agent 7 tasks, CLI 4 tasks
+**Execution**: Parallel batches use single Claude message with multiple tool calls (no concurrency limit)
 
 ## Error Handling
 
@@ -546,10 +547,26 @@ Passed from lite-plan via global variable:
   clarificationContext: {...} | null,
   executionMethod: "Agent" | "Codex" | "Auto",
   codeReviewTool: "Skip" | "Gemini Review" | "Agent Review" | string,
-  originalUserInput: string
+  originalUserInput: string,
+
+  // Session artifacts location (saved by lite-plan)
+  session: {
+    id: string,                        // Session identifier: {taskSlug}-{shortTimestamp}
+    folder: string,                    // Session folder path: .workflow/.lite-plan/{session-id}
+    artifacts: {
+      exploration: string | null,      // exploration.json path (if exploration performed)
+      plan: string,                    // plan.json path (always present)
+      task: string                     // task.json path (always exported)
+    }
+  }
 }
 ```
 
+**Artifact Usage**:
+- Artifact files contain detailed planning context
+- Pass artifact paths to CLI tools and agents for enhanced context
+- See execution options below for usage examples
+
 ### executionResult (Output)
 
 Collected after each execution call completes:

.claude/commands/workflow/lite-fix.md

@@ -0,0 +1,652 @@
+---
+name: lite-fix
+description: Lightweight bug diagnosis and fix workflow with intelligent severity assessment and optional hotfix mode for production incidents
+argument-hint: "[--hotfix] \"bug description or issue reference\""
+allowed-tools: TodoWrite(*), Task(*), SlashCommand(*), AskUserQuestion(*), Read(*), Bash(*)
+---
+
+# Workflow Lite-Fix Command (/workflow:lite-fix)
+
+## Overview
+
+Fast-track bug fixing workflow optimized for quick diagnosis, targeted fixes, and streamlined verification. Automatically adjusts process complexity based on impact assessment.
+
+**Core capabilities:**
+- Rapid root cause diagnosis with intelligent code search
+- Automatic severity assessment and adaptive workflow
+- Fix strategy selection (immediate patch vs comprehensive refactor)
+- Risk-aware verification (smoke tests to full suite)
+- Optional hotfix mode for production incidents with branch management
+- Automatic follow-up task generation for hotfixes
+
+## Usage
+
+### Command Syntax
+```bash
+/workflow:lite-fix [FLAGS] <BUG_DESCRIPTION>
+
+# Flags
+--hotfix, -h               Production hotfix mode (creates hotfix branch, auto follow-up)
+
+# Arguments
+<bug-description>          Bug description or issue reference (required)
+```
+
+### Modes
+
+| Mode | Time Budget | Use Case | Workflow Characteristics |
+|------|-------------|----------|--------------------------|
+| **Default** | Auto-adapt (15min-4h) | All standard bugs | Intelligent severity assessment + adaptive process |
+| **Hotfix** (`--hotfix`) | 15-30 min | Production outage | Minimal diagnosis + hotfix branch + auto follow-up |
+
+### Examples
+
+```bash
+# Default mode: Automatically adjusts based on impact
+/workflow:lite-fix "User avatar upload fails with 413 error"
+/workflow:lite-fix "Shopping cart randomly loses items at checkout"
+
+# Hotfix mode: Production incident
+/workflow:lite-fix --hotfix "Payment gateway 5xx errors"
+```
+
+## Execution Process
+
+### Workflow Overview
+
+```
+Bug Input → Diagnosis (Phase 1) → Impact Assessment (Phase 2)
+        ↓
+    Severity Auto-Detection → Fix Planning (Phase 3)
+        ↓
+    Verification Strategy (Phase 4) → User Confirmation (Phase 5) → Execution (Phase 6)
+```
+
+### Phase Summary
+
+| Phase | Default Mode | Hotfix Mode |
+|-------|--------------|-------------|
+| 1. Diagnosis | Adaptive search depth | Minimal (known issue) |
+| 2. Impact Assessment | Full risk scoring | Critical path only |
+| 3. Fix Planning | Strategy options based on complexity | Single surgical fix |
+| 4. Verification | Test level matches risk score | Smoke tests only |
+| 5. User Confirmation | 3 dimensions | 2 dimensions |
+| 6. Execution | Via lite-execute | Via lite-execute + monitoring |
+
+---
+
+## Detailed Phase Execution
+
+### Phase 1: Diagnosis & Root Cause Analysis
+
+**Goal**: Identify root cause and affected code paths
+
+**Execution Strategy**:
+
+**Default Mode** - Adaptive search:
+- **High confidence keywords** (e.g., specific error messages): Direct grep search (5min)
+- **Medium confidence**: cli-explore-agent with focused search (10-15min)
+- **Low confidence** (vague symptoms): cli-explore-agent with broad search (20min)
+
+```javascript
+// Confidence-based strategy selection
+if (has_specific_error_message || has_file_path_hint) {
+  // Quick targeted search
+  grep -r '${error_message}' src/ --include='*.ts' -n | head -10
+  git log --oneline --since='1 week ago' -- '*affected*'
+} else {
+  // Deep exploration
+  Task(subagent_type="cli-explore-agent", prompt=`
+    Bug: ${bug_description}
+    Execute diagnostic search:
+    1. Search error patterns and similar issues
+    2. Trace execution path in affected modules
+    3. Check recent changes
+    Return: Root cause hypothesis, affected paths, reproduction steps
+  `)
+}
+```
+
+**Hotfix Mode** - Minimal search:
+```bash
+Read(suspected_file)  # User typically knows the file
+git blame ${suspected_file}
+```
+
+**Output Structure**:
+```javascript
+{
+  root_cause: {
+    file: "src/auth/tokenValidator.ts",
+    line_range: "45-52",
+    issue: "Token expiration check uses wrong comparison",
+    introduced_by: "commit abc123"
+  },
+  reproduction_steps: ["Login", "Wait 15min", "Access protected route"],
+  affected_scope: {
+    users: "All authenticated users",
+    features: ["login", "API access"],
+    data_risk: "none"
+  }
+}
+```
+
+**TodoWrite**: Mark Phase 1 completed, Phase 2 in_progress
+
+---
+
+### Phase 2: Impact Assessment & Severity Auto-Detection
+
+**Goal**: Quantify blast radius and auto-determine severity
+
+**Risk Score Calculation**:
+```javascript
+risk_score = (user_impact × 0.4) + (system_risk × 0.3) + (business_impact × 0.3)
+
+// Auto-severity mapping
+if (risk_score >= 8.0) severity = "critical"
+else if (risk_score >= 5.0) severity = "high"
+else if (risk_score >= 3.0) severity = "medium"
+else severity = "low"
+
+// Workflow adaptation
+if (severity >= "high") {
+  diagnosis_depth = "focused"
+  test_strategy = "smoke_and_critical"
+  review_optional = true
+} else {
+  diagnosis_depth = "comprehensive"
+  test_strategy = "full_suite"
+  review_optional = false
+}
+```
+
+**Assessment Output**:
+```javascript
+{
+  affected_users: {
+    count: "5000 active users (100%)",
+    severity: "high"
+  },
+  system_risk: {
+    availability: "degraded_30%",
+    cascading_failures: "possible_logout_storm"
+  },
+  business_impact: {
+    revenue: "medium",
+    reputation: "high",
+    sla_breach: "yes"
+  },
+  risk_score: 7.1,
+  severity: "high",
+  workflow_adaptation: {
+    test_strategy: "focused_integration",
+    review_required: false,
+    time_budget: "1_hour"
+  }
+}
+```
+
+**Hotfix Mode**: Skip detailed assessment, assume critical
+
+**TodoWrite**: Mark Phase 2 completed, Phase 3 in_progress
+
+---
+
+### Phase 3: Fix Planning & Strategy Selection
+
+**Goal**: Generate fix options with trade-off analysis
+
+**Strategy Generation**:
+
+**Default Mode** - Complexity-adaptive:
+- **Low risk score (<5.0)**: Generate 2-3 strategy options for user selection
+- **High risk score (≥5.0)**: Generate single best strategy for speed
+
+```javascript
+strategies = generateFixStrategies(root_cause, risk_score)
+
+if (risk_score >= 5.0 || mode === "hotfix") {
+  // Single best strategy
+  return strategies[0]  // Fastest viable fix
+} else {
+  // Multiple options with trade-offs
+  return strategies  // Let user choose
+}
+```
+
+**Example Strategies**:
+```javascript
+// Low risk: Multiple options
+[
+  {
+    strategy: "immediate_patch",
+    description: "Fix comparison operator",
+    estimated_time: "15 minutes",
+    risk: "low",
+    pros: ["Quick fix"],
+    cons: ["Doesn't address underlying issue"]
+  },
+  {
+    strategy: "comprehensive_fix",
+    description: "Refactor token validation logic",
+    estimated_time: "2 hours",
+    risk: "medium",
+    pros: ["Addresses root cause"],
+    cons: ["Longer implementation"]
+  }
+]
+
+// High risk or hotfix: Single option
+{
+  strategy: "surgical_fix",
+  description: "Minimal change to fix comparison",
+  files: ["src/auth/tokenValidator.ts:47"],
+  estimated_time: "5 minutes",
+  risk: "minimal"
+}
+```
+
+**Complexity Assessment**:
+```javascript
+if (complexity === "high" && risk_score < 5.0) {
+  suggestCommand("/workflow:plan --mode bugfix")
+  return  // Escalate to full planning
+}
+```
+
+**TodoWrite**: Mark Phase 3 completed, Phase 4 in_progress
+
+---
+
+### Phase 4: Verification Strategy
+
+**Goal**: Define testing approach based on severity
+
+**Adaptive Test Strategy**:
+
+| Risk Score | Test Scope | Duration | Automation |
+|------------|------------|----------|------------|
+| **< 3.0** (Low) | Full test suite | 15-20 min | `npm test` |
+| **3.0-5.0** (Medium) | Focused integration | 8-12 min | `npm test -- affected-module.test.ts` |
+| **5.0-8.0** (High) | Smoke + critical | 5-8 min | `npm test -- critical.smoke.test.ts` |
+| **≥ 8.0** (Critical) | Smoke only | 2-5 min | `npm test -- smoke.test.ts` |
+| **Hotfix** | Production smoke | 2-3 min | `npm test -- production.smoke.test.ts` |
+
+**Branch Strategy**:
+
+**Default Mode**:
+```javascript
+{
+  type: "feature_branch",
+  base: "main",
+  name: "fix/token-expiration-edge-case",
+  merge_target: "main"
+}
+```
+
+**Hotfix Mode**:
+```javascript
+{
+  type: "hotfix_branch",
+  base: "production_tag_v2.3.1",  // ⚠️ From production tag
+  name: "hotfix/token-validation-fix",
+  merge_target: ["main", "production"]  // Dual merge
+}
+```
+
+**TodoWrite**: Mark Phase 4 completed, Phase 5 in_progress
+
+---
+
+### Phase 5: User Confirmation & Execution Selection
+
+**Adaptive Confirmation Dimensions**:
+
+**Default Mode** - 3 dimensions (adapted by risk score):
+
+```javascript
+dimensions = [
+  {
+    question: "Confirm fix approach?",
+    options: ["Proceed", "Modify", "Escalate to /workflow:plan"]
+  },
+  {
+    question: "Execution method:",
+    options: ["Agent", "CLI Tool (Codex/Gemini)", "Manual (plan only)"]
+  },
+  {
+    question: "Verification level:",
+    options: adaptedByRiskScore()  // Auto-suggest based on Phase 2
+  }
+]
+
+// If risk_score >= 5.0, auto-skip code review dimension
+// If risk_score < 5.0, add optional code review dimension
+if (risk_score < 5.0) {
+  dimensions.push({
+    question: "Post-fix review:",
+    options: ["Gemini", "Skip"]
+  })
+}
+```
+
+**Hotfix Mode** - 2 dimensions (minimal):
+```javascript
+[
+  {
+    question: "Confirm hotfix deployment:",
+    options: ["Deploy", "Stage First", "Abort"]
+  },
+  {
+    question: "Post-deployment monitoring:",
+    options: ["Real-time (15 min)", "Passive (alerts only)"]
+  }
+]
+```
+
+**TodoWrite**: Mark Phase 5 completed, Phase 6 in_progress
+
+---
+
+### Phase 6: Execution Dispatch & Follow-up
+
+**Dispatch to lite-execute**:
+
+```javascript
+executionContext = {
+  mode: "bugfix",
+  severity: auto_detected_severity,  // From Phase 2
+  planObject: plan,
+  diagnosisContext: diagnosis,
+  impactContext: impact_assessment,
+  verificationStrategy: test_strategy,
+  branchStrategy: branch_strategy,
+  executionMethod: user_selection.execution_method
+}
+
+SlashCommand("/workflow:lite-execute --in-memory --mode bugfix")
+```
+
+**Hotfix Auto Follow-up**:
+
+```javascript
+if (mode === "hotfix") {
+  follow_up_tasks = [
+    {
+      id: `FOLLOWUP-${taskId}-comprehensive`,
+      title: "Replace hotfix with comprehensive fix",
+      priority: "high",
+      due_date: "within_3_days",
+      description: "Refactor quick hotfix into proper solution with full test coverage"
+    },
+    {
+      id: `FOLLOWUP-${taskId}-postmortem`,
+      title: "Incident postmortem",
+      priority: "medium",
+      due_date: "within_1_week",
+      sections: ["Timeline", "Root cause", "Prevention measures"]
+    }
+  ]
+
+  Write(`.workflow/lite-fixes/${taskId}-followup.json`, follow_up_tasks)
+
+  console.log(`
+  ⚠️ Hotfix follow-up tasks generated:
+  - Comprehensive fix: ${follow_up_tasks[0].id} (due in 3 days)
+  - Postmortem: ${follow_up_tasks[1].id} (due in 1 week)
+  `)
+}
+```
+
+**TodoWrite**: Mark Phase 6 completed
+
+---
+
+## Data Structures
+
+### diagnosisContext
+```javascript
+{
+  symptom: string,
+  error_message: string | null,
+  keywords: string[],
+  confidence_level: "high" | "medium" | "low",  // Search confidence
+  root_cause: {
+    file: string,
+    line_range: string,
+    issue: string,
+    introduced_by: string
+  },
+  reproduction_steps: string[],
+  affected_scope: {...}
+}
+```
+
+### impactContext
+```javascript
+{
+  affected_users: { count: string, severity: string },
+  system_risk: { availability: string, cascading_failures: string },
+  business_impact: { revenue: string, reputation: string, sla_breach: string },
+  risk_score: number,  // 0-10
+  severity: "low" | "medium" | "high" | "critical",
+  workflow_adaptation: {
+    diagnosis_depth: string,
+    test_strategy: string,
+    review_optional: boolean,
+    time_budget: string
+  }
+}
+```
+
+### fixPlan
+```javascript
+{
+  strategy: string,
+  summary: string,
+  tasks: [{
+    title: string,
+    file: string,
+    action: "Update" | "Create" | "Delete",
+    implementation: string[],
+    verification: string[]
+  }],
+  estimated_time: string,
+  recommended_execution: "Agent" | "CLI" | "Manual"
+}
+```
+
+---
+
+## Best Practices
+
+### When to Use Default Mode
+
+**Use for all standard bugs:**
+- Automatically adapts to severity (no manual mode selection needed)
+- Risk score determines workflow complexity
+- Handles 90% of bug fixing scenarios
+
+**Typical scenarios:**
+- UI bugs, logic errors, edge cases
+- Performance issues (non-critical)
+- Integration failures
+- Data validation bugs
+
+### When to Use Hotfix Mode
+
+**Only use for production incidents:**
+- Production is down or critically degraded
+- Revenue/reputation at immediate risk
+- SLA breach occurring
+- Issue is well-understood (minimal diagnosis needed)
+
+**Hotfix characteristics:**
+- Creates hotfix branch from production tag
+- Minimal diagnosis (assumes known issue)
+- Smoke tests only
+- Auto-generates follow-up tasks
+- Requires incident tracking
+
+### Branching Strategy
+
+**Default Mode (feature branch)**:
+```bash
+# Standard feature branch workflow
+git checkout -b fix/issue-description main
+# ... implement fix
+git checkout main && git merge fix/issue-description
+```
+
+**Hotfix Mode (dual merge)**:
+```bash
+# ✅ Correct: Branch from production tag
+git checkout -b hotfix/fix-name v2.3.1
+
+# Merge to both targets
+git checkout main && git merge hotfix/fix-name
+git checkout production && git merge hotfix/fix-name
+git tag v2.3.2
+
+# ❌ Wrong: Branch from main
+git checkout -b hotfix/fix-name main  # Contains unreleased code!
+```
+
+---
+
+## Error Handling
+
+| Error | Cause | Resolution |
+|-------|-------|------------|
+| Root cause unclear | Vague symptoms | Extend diagnosis time or use /cli:mode:bug-diagnosis |
+| Multiple potential causes | Complex interaction | Use /cli:discuss-plan for analysis |
+| Fix too complex | High-risk refactor | Escalate to /workflow:plan --mode bugfix |
+| High risk score but unsure | Uncertain severity | Default mode will adapt, proceed normally |
+
+---
+
+## Output Routing
+
+**Lite-fix directory**:
+```
+.workflow/lite-fixes/
+├── BUGFIX-2024-10-20T14-30-00.json          # Task JSON
+├── BUGFIX-2024-10-20T14-30-00-followup.json # Follow-up (hotfix only)
+└── diagnosis-cache/                          # Cached diagnoses
+    └── ${bug_hash}.json
+```
+
+**Session-based** (if active session):
+```
+.workflow/active/WFS-feature/
+├── .bugfixes/
+│   ├── BUGFIX-001.json
+│   └── BUGFIX-001-followup.json
+└── .summaries/
+    └── BUGFIX-001-summary.md
+```
+
+---
+
+## Advanced Features
+
+### 1. Intelligent Diagnosis Caching
+
+Reuse diagnosis for similar bugs:
+```javascript
+cache_key = hash(bug_keywords + recent_changes_hash)
+if (cache_exists && cache_age < 7_days && similarity > 0.8) {
+  diagnosis = load_from_cache()
+  console.log("Using cached diagnosis (similar issue found)")
+}
+```
+
+### 2. Auto-Severity Suggestion
+
+Detect urgency from keywords:
+```javascript
+urgency_keywords = ["production", "down", "outage", "critical", "urgent"]
+if (bug_description.includes(urgency_keywords) && !mode_specified) {
+  console.log("💡 Tip: Consider --hotfix flag for production issues")
+}
+```
+
+### 3. Adaptive Workflow Intelligence
+
+Real-time workflow adjustment:
+```javascript
+// During Phase 2, if risk score suddenly increases
+if (new_risk_score > initial_estimate * 1.5) {
+  console.log("⚠️ Severity increased, adjusting workflow...")
+  test_strategy = "more_comprehensive"
+  review_required = true
+}
+```
+
+---
+
+## Related Commands
+
+**Diagnostic Commands**:
+- `/cli:mode:bug-diagnosis` - Detailed root cause analysis (use before lite-fix if unclear)
+
+**Fix Execution**:
+- `/workflow:lite-execute --in-memory` - Execute fix plan (automatically called)
+
+**Planning Commands**:
+- `/workflow:plan --mode bugfix` - Complex bugs requiring comprehensive planning
+
+**Review Commands**:
+- `/workflow:review --type quality` - Post-fix quality review
+
+---
+
+## Comparison with Other Commands
+
+| Command | Use Case | Modes | Adaptation | Output |
+|---------|----------|-------|------------|--------|
+| `/workflow:lite-fix` | Bug fixes | 2 (default + hotfix) | Auto-adaptive | In-memory + JSON |
+| `/workflow:lite-plan` | New features | 1 + explore flag | Manual | In-memory + JSON |
+| `/workflow:plan` | Complex features | Multiple | Manual | Persistent session |
+| `/cli:mode:bug-diagnosis` | Analysis only | 1 | N/A | Report only |
+
+---
+
+## Quality Gates
+
+**Before execution** (auto-checked):
+- [ ] Root cause identified (>70% confidence for default, >90% for hotfix)
+- [ ] Impact scope defined
+- [ ] Fix strategy reviewed
+- [ ] Verification plan matches risk level
+
+**Hotfix-specific**:
+- [ ] Production tag identified
+- [ ] Rollback plan documented
+- [ ] Follow-up tasks generated
+- [ ] Monitoring configured
+
+---
+
+## When to Use lite-fix
+
+✅ **Perfect for:**
+- Any bug with clear symptoms
+- Localized fixes (1-5 files)
+- Known technology stack
+- Time-sensitive but not catastrophic (default mode adapts)
+- Production incidents (use --hotfix)
+
+❌ **Not suitable for:**
+- Root cause completely unclear → use `/cli:mode:bug-diagnosis` first
+- Requires architectural changes → use `/workflow:plan`
+- Complex legacy code without tests → use `/workflow:plan --legacy-refactor`
+- Performance deep-dive → use `/workflow:plan --performance-optimization`
+- Data migration → use `/workflow:plan --data-migration`
+
+---
+
+**Last Updated**: 2025-11-20
+**Version**: 2.0.0
+**Status**: Design Document (Simplified)

.claude/commands/workflow/lite-plan.md

@@ -130,6 +130,13 @@ needsExploration = (
 
 **Exploration Execution** (if needed):
 ```javascript
+// Generate session identifiers for artifact storage
+const taskSlug = task_description.toLowerCase().replace(/[^a-z0-9]+/g, '-').substring(0, 40)
+const timestamp = new Date().toISOString().replace(/[:.]/g, '-')
+const shortTimestamp = timestamp.substring(0, 19).replace('T', '-') // YYYY-MM-DD-HH-mm-ss
+const sessionId = `${taskSlug}-${shortTimestamp}`
+const sessionFolder = `.workflow/.lite-plan/${sessionId}`
+
 Task(
   subagent_type="cli-explore-agent",
   description="Analyze codebase for task context",
@@ -149,9 +156,14 @@ Task(
   Output Format: JSON-like structured object
   `
 )
+
+// Save exploration results for CLI/agent access in lite-execute
+const explorationFile = `${sessionFolder}/exploration.json`
+Write(explorationFile, JSON.stringify(explorationContext, null, 2))
 ```
 
-**Output**: `explorationContext` (see Data Structures section)
+**Output**: `explorationContext` (in-memory, see Data Structures section)
+**Artifact**: Saved to `{sessionFolder}/exploration.json` for CLI/agent use
 
 **Progress Tracking**:
 - Mark Phase 1 completed
@@ -228,6 +240,14 @@ Current Claude generates plan directly:
 - Estimated Time: Total implementation time
 - Recommended Execution: "Agent"
 
+```javascript
+// Save planning results to session folder (same as Option B)
+const planFile = `${sessionFolder}/plan.json`
+Write(planFile, JSON.stringify(planObject, null, 2))
+```
+
+**Artifact**: Saved to `{sessionFolder}/plan.json` for CLI/agent use
+
 **Option B: Agent-Based Planning (Medium/High Complexity)**
 
 Delegate to cli-lite-planning-agent:
@@ -270,9 +290,14 @@ Task(
   Format: "{Action} in {file_path}: {details} following {pattern}"
   `
 )
+
+// Save planning results to session folder
+const planFile = `${sessionFolder}/plan.json`
+Write(planFile, JSON.stringify(planObject, null, 2))
 ```
 
 **Output**: `planObject` (see Data Structures section)
+**Artifact**: Saved to `{sessionFolder}/plan.json` for CLI/agent use
 
 **Progress Tracking**:
 - Mark Phase 3 completed
@@ -315,7 +340,7 @@ ${i+1}. **${task.title}** (${task.file})
 
 **Step 4.2: Collect User Confirmation**
 
-Four questions via single AskUserQuestion call:
+Three questions via single AskUserQuestion call:
 
 ```javascript
 AskUserQuestion({
@@ -353,15 +378,6 @@ Confirm plan? (Multi-select: can supplement via "Other")`,
         { label: "Agent Review", description: "@code-reviewer agent" },
         { label: "Skip", description: "No review" }
       ]
-    },
-    {
-      question: "Export plan to Enhanced Task JSON file?\n\nAllows reuse with lite-execute later.",
-      header: "Export JSON",
-      multiSelect: false,
-      options: [
-        { label: "Yes", description: "Export to JSON (recommended for complex tasks)" },
-        { label: "No", description: "Keep in-memory only" }
-      ]
     }
   ]
 })
@@ -384,10 +400,6 @@ Code Review (after execution):
   ├─ Gemini Review → gemini CLI analysis
   ├─ Agent Review → Current Claude review
   └─ Other → Custom tool (e.g., qwen, codex)
-
-Export JSON:
-  ├─ Yes → Export to .workflow/lite-plans/plan-{timestamp}.json
-  └─ No → In-memory only
 ```
 
 **Progress Tracking**:
@@ -398,48 +410,48 @@ Export JSON:
 
 ### Phase 5: Dispatch to Execution
 
-**Step 5.1: Export Enhanced Task JSON (Optional)**
+**Step 5.1: Export Enhanced Task JSON**
 
-Only execute if `userSelection.export_task_json === "Yes"`:
+Always export Enhanced Task JSON to session folder:
 
 ```javascript
-if (userSelection.export_task_json === "Yes") {
-  const timestamp = new Date().toISOString().replace(/[:.]/g, '-')
-  const taskId = `LP-${timestamp}`
-  const filename = `.workflow/lite-plans/${taskId}.json`
+const taskId = `LP-${shortTimestamp}`
+const filename = `${sessionFolder}/task.json`
 
-  const enhancedTaskJson = {
-    id: taskId,
-    title: original_task_description,
-    status: "pending",
+const enhancedTaskJson = {
+  id: taskId,
+  title: original_task_description,
+  status: "pending",
 
-    meta: {
-      type: "planning",
-      created_at: new Date().toISOString(),
-      complexity: planObject.complexity,
-      estimated_time: planObject.estimated_time,
-      recommended_execution: planObject.recommended_execution,
-      workflow: "lite-plan"
+  meta: {
+    type: "planning",
+    created_at: new Date().toISOString(),
+    complexity: planObject.complexity,
+    estimated_time: planObject.estimated_time,
+    recommended_execution: planObject.recommended_execution,
+    workflow: "lite-plan",
+    session_id: sessionId,
+    session_folder: sessionFolder
+  },
+
+  context: {
+    requirements: [original_task_description],
+    plan: {
+      summary: planObject.summary,
+      approach: planObject.approach,
+      tasks: planObject.tasks
     },
-
-    context: {
-      requirements: [original_task_description],
-      plan: {
-        summary: planObject.summary,
-        approach: planObject.approach,
-        tasks: planObject.tasks
-      },
-      exploration: explorationContext || null,
-      clarifications: clarificationContext || null,
-      focus_paths: explorationContext?.relevant_files || [],
-      acceptance: planObject.tasks.flatMap(t => t.acceptance)
-    }
+    exploration: explorationContext || null,
+    clarifications: clarificationContext || null,
+    focus_paths: explorationContext?.relevant_files || [],
+    acceptance: planObject.tasks.flatMap(t => t.acceptance)
   }
-
-  Write(filename, JSON.stringify(enhancedTaskJson, null, 2))
-  console.log(`Enhanced Task JSON exported to: ${filename}`)
-  console.log(`Reuse with: /workflow:lite-execute ${filename}`)
 }
+
+Write(filename, JSON.stringify(enhancedTaskJson, null, 2))
+console.log(`Enhanced Task JSON exported to: ${filename}`)
+console.log(`Session folder: ${sessionFolder}`)
+console.log(`Reuse with: /workflow:lite-execute ${filename}`)
 ```
 
 **Step 5.2: Store Execution Context**
@@ -451,7 +463,18 @@ executionContext = {
   clarificationContext: clarificationContext || null,
   executionMethod: userSelection.execution_method,
   codeReviewTool: userSelection.code_review_tool,
-  originalUserInput: original_task_description
+  originalUserInput: original_task_description,
+
+  // Session artifacts location
+  session: {
+    id: sessionId,
+    folder: sessionFolder,
+    artifacts: {
+      exploration: explorationContext ? `${sessionFolder}/exploration.json` : null,
+      plan: `${sessionFolder}/plan.json`,
+      task: `${sessionFolder}/task.json`  // Always exported
+    }
+  }
 }
 ```
 
@@ -462,7 +485,11 @@ SlashCommand(command="/workflow:lite-execute --in-memory")
 ```
 
 **Execution Handoff**:
-- lite-execute reads `executionContext` variable
+- lite-execute reads `executionContext` variable from memory
+- `executionContext.session.artifacts` contains file paths to saved planning artifacts:
+  - `exploration` - exploration.json (if exploration performed)
+  - `plan` - plan.json (always exists)
+  - `task` - task.json (if user selected export)
 - All execution logic handled by lite-execute
 - lite-plan completes after successful handoff
 
@@ -502,7 +529,7 @@ SlashCommand(command="/workflow:lite-execute --in-memory")
      - Plan confirmation (multi-select with supplements)
      - Execution method selection
      - Code review tool selection (custom via "Other")
-     - JSON export option
+   - Enhanced Task JSON always exported to session folder
    - Allows plan refinement without re-selecting execution method
 
 ### Task Management
@@ -519,11 +546,11 @@ SlashCommand(command="/workflow:lite-execute --in-memory")
    - Medium: 5-7 tasks (detailed)
    - High: 7-10 tasks (comprehensive)
 
-3. **No File Artifacts During Planning**:
-   - All planning stays in memory
-   - Optional Enhanced Task JSON export (user choice)
-   - Faster workflow, cleaner workspace
-   - Plan context passed directly to execution
+3. **Session Artifact Management**:
+   - All planning artifacts saved to dedicated session folder
+   - Enhanced Task JSON always exported for reusability
+   - Plan context passed to execution via memory and files
+   - Clean organization with session-based folder structure
 
 ### Planning Standards
 
@@ -550,6 +577,39 @@ SlashCommand(command="/workflow:lite-execute --in-memory")
 | Phase 4 Confirmation Timeout | User no response > 5 minutes | Save context to temp var, display resume instructions, exit gracefully |
 | Phase 4 Modification Loop | User requests modify > 3 times | Suggest breaking task into smaller pieces or using `/workflow:plan` |
 
+## Session Folder Structure
+
+Each lite-plan execution creates a dedicated session folder to organize all artifacts:
+
+```
+.workflow/.lite-plan/{task-slug}-{short-timestamp}/
+├── exploration.json          # Exploration results (if exploration performed)
+├── plan.json                 # Planning results (always created)
+└── task.json                 # Enhanced Task JSON (always created)
+```
+
+**Folder Naming Convention**:
+- `{task-slug}`: First 40 characters of task description, lowercased, non-alphanumeric replaced with `-`
+- `{short-timestamp}`: YYYY-MM-DD-HH-mm-ss format
+- Example: `.workflow/.lite-plan/implement-user-auth-jwt-2025-01-15-14-30-45/`
+
+**File Contents**:
+- `exploration.json`: Complete explorationContext object (if exploration performed, see Data Structures)
+- `plan.json`: Complete planObject (always created, see Data Structures)
+- `task.json`: Enhanced Task JSON with all context (always created, see Data Structures)
+
+**Access Patterns**:
+- **lite-plan**: Creates folder and writes all artifacts during execution, passes paths via `executionContext.session.artifacts`
+- **lite-execute**: Reads artifact paths from `executionContext.session.artifacts` (see lite-execute.md for usage details)
+- **User**: Can inspect artifacts for debugging or reference
+- **Reuse**: Pass `task.json` path to `/workflow:lite-execute {path}` for re-execution
+
+**Benefits**:
+- Clean separation between different task executions
+- Easy to find and inspect artifacts for specific tasks
+- Natural history/audit trail of planning sessions
+- Supports concurrent lite-plan executions without conflicts
+
 ## Data Structures
 
 ### explorationContext
@@ -621,7 +681,18 @@ Context passed to lite-execute via --in-memory (Phase 5):
   clarificationContext: {...} | null,  // User responses from Phase 2
   executionMethod: "Agent" | "Codex" | "Auto",
   codeReviewTool: "Skip" | "Gemini Review" | "Agent Review" | string,
-  originalUserInput: string            // User's original task description
+  originalUserInput: string,           // User's original task description
+
+  // Session artifacts location (for lite-execute to access saved files)
+  session: {
+    id: string,                        // Session identifier: {taskSlug}-{shortTimestamp}
+    folder: string,                    // Session folder path: .workflow/.lite-plan/{session-id}
+    artifacts: {
+      exploration: string | null,      // exploration.json path (if exploration performed)
+      plan: string,                    // plan.json path (always present)
+      task: string                     // task.json path (always exported)
+    }
+  }
 }
 ```
 

.claude/commands/workflow/plan.md

@@ -70,7 +70,9 @@ CONTEXT: Existing user database schema, REST API endpoints
 
 **Validation**:
 - Session ID successfully extracted
-- Session directory `.workflow/[sessionId]/` exists
+- Session directory `.workflow/active/[sessionId]/` exists
+
+**Note**: Session directory contains `workflow-session.json` (metadata). Do NOT look for `manifest.json` here - it only exists in `.workflow/archives/` for archived sessions.
 
 **TodoWrite**: Mark phase 1 completed, phase 2 in_progress
 
@@ -87,7 +89,7 @@ CONTEXT: Existing user database schema, REST API endpoints
 
 **Parse Output**:
 - Extract: context-package.json path (store as `contextPath`)
-- Typical pattern: `.workflow/[sessionId]/.process/context-package.json`
+- Typical pattern: `.workflow/active/[sessionId]/.process/context-package.json`
 
 **Validation**:
 - Context package path extracted
@@ -141,7 +143,7 @@ CONTEXT: Existing user database schema, REST API endpoints
 - Verify: CONFLICT_RESOLUTION.md file path (if executed)
 
 **Validation**:
-- File `.workflow/[sessionId]/.process/CONFLICT_RESOLUTION.md` exists (if executed)
+- File `.workflow/active/[sessionId]/.process/CONFLICT_RESOLUTION.md` exists (if executed)
 
 **Skip Behavior**:
 - If conflict_risk is "none" or "low", skip directly to Phase 3.5
@@ -232,9 +234,9 @@ SlashCommand(command="/workflow:tools:task-generate-agent --session [sessionId]
 **Input**: `sessionId` from Phase 1
 
 **Validation**:
-- `.workflow/[sessionId]/IMPL_PLAN.md` exists
-- `.workflow/[sessionId]/.task/IMPL-*.json` exists (at least one)
-- `.workflow/[sessionId]/TODO_LIST.md` exists
+- `.workflow/active/[sessionId]/IMPL_PLAN.md` exists
+- `.workflow/active/[sessionId]/.task/IMPL-*.json` exists (at least one)
+- `.workflow/active/[sessionId]/TODO_LIST.md` exists
 
 <!-- TodoWrite: When task-generate-agent invoked, ATTACH 1 agent task -->
 
@@ -266,7 +268,7 @@ SlashCommand(command="/workflow:tools:task-generate-agent --session [sessionId]
 ```
 Planning complete for session: [sessionId]
 Tasks generated: [count]
-Plan: .workflow/[sessionId]/IMPL_PLAN.md
+Plan: .workflow/active/[sessionId]/IMPL_PLAN.md
 
 Recommended Next Steps:
 1. /workflow:action-plan-verify --session [sessionId]  # Verify plan quality before execution

.claude/commands/workflow/replan.md

@@ -0,0 +1,470 @@
+---
+name: replan
+description: Interactive workflow replanning with session-level artifact updates and boundary clarification through guided questioning
+argument-hint: "[--session session-id] [task-id] \"requirements\"|file.md [--interactive]"
+allowed-tools: Read(*), Write(*), Edit(*), TodoWrite(*), Glob(*), Bash(*)
+---
+
+# Workflow Replan Command
+
+## Overview
+Intelligently replans workflow sessions or individual tasks with interactive boundary clarification and comprehensive artifact updates.
+
+**Core Capabilities**:
+- **Session Replan**: Updates multiple artifacts (IMPL_PLAN.md, TODO_LIST.md, task JSONs)
+- **Task Replan**: Focused updates within session context
+- **Interactive Clarification**: Guided questioning to define modification boundaries
+- **Impact Analysis**: Automatic detection of affected files and dependencies
+- **Backup Management**: Preserves previous versions with restore capability
+
+## Operation Modes
+
+### Session Replan Mode
+
+```bash
+# Auto-detect active session
+/workflow:replan "添加双因素认证支持"
+
+# Explicit session
+/workflow:replan --session WFS-oauth "添加双因素认证支持"
+
+# File-based input
+/workflow:replan --session WFS-oauth requirements-update.md
+
+# Interactive mode
+/workflow:replan --interactive
+```
+
+### Task Replan Mode
+
+```bash
+# Direct task update
+/workflow:replan IMPL-1 "修改为使用 OAuth2.0 标准"
+
+# Task with explicit session
+/workflow:replan --session WFS-oauth IMPL-2 "增加单元测试覆盖率到 90%"
+
+# Interactive mode
+/workflow:replan IMPL-1 --interactive
+```
+
+## Execution Lifecycle
+
+### Phase 1: Mode Detection & Session Discovery
+
+**Process**:
+1. **Detect Operation Mode**:
+   - Check if task ID provided (IMPL-N or IMPL-N.M format) → Task mode
+   - Otherwise → Session mode
+
+2. **Discover/Validate Session**:
+   - Use `--session` flag if provided
+   - Otherwise auto-detect from `.workflow/active/`
+   - Validate session exists
+
+3. **Load Session Context**:
+   - Read `workflow-session.json`
+   - List existing tasks
+   - Read `IMPL_PLAN.md` and `TODO_LIST.md`
+
+**Output**: Session validated, context loaded, mode determined
+
+---
+
+### Phase 2: Interactive Requirement Clarification
+
+**Purpose**: Define modification scope through guided questioning
+
+#### Session Mode Questions
+
+**Q1: Modification Scope**
+```javascript
+Options:
+- 仅更新任务细节 (tasks_only)
+- 修改规划方案 (plan_update)
+- 重构任务结构 (task_restructure)
+- 全面重规划 (comprehensive)
+```
+
+**Q2: Affected Modules** (if scope >= plan_update)
+```javascript
+Options: Dynamically generated from existing tasks' focus_paths
+- 认证模块 (src/auth)
+- 用户管理 (src/user)
+- 全部模块
+```
+
+**Q3: Task Changes** (if scope >= task_restructure)
+```javascript
+Options:
+- 添加新任务
+- 删除现有任务
+- 合并任务
+- 拆分任务
+- 仅更新内容
+```
+
+**Q4: Dependency Changes**
+```javascript
+Options:
+- 是,需要重新梳理依赖
+- 否,保持现有依赖
+```
+
+#### Task Mode Questions
+
+**Q1: Update Type**
+```javascript
+Options:
+- 需求和验收标准 (requirements & acceptance)
+- 实现方案 (implementation_approach)
+- 文件范围 (focus_paths)
+- 依赖关系 (depends_on)
+- 全部更新
+```
+
+**Q2: Ripple Effect**
+```javascript
+Options:
+- 是,需要同步更新依赖任务
+- 否,仅影响当前任务
+- 不确定,请帮我分析
+```
+
+**Output**: User selections stored, modification boundaries defined
+
+---
+
+### Phase 3: Impact Analysis & Planning
+
+**Step 3.1: Analyze Required Changes**
+
+Determine affected files based on clarification:
+
+```typescript
+interface ImpactAnalysis {
+  affected_files: {
+    impl_plan: boolean;
+    todo_list: boolean;
+    session_meta: boolean;
+    tasks: string[];
+  };
+
+  operations: {
+    type: 'create' | 'update' | 'delete' | 'merge' | 'split';
+    target: string;
+    reason: string;
+  }[];
+
+  backup_strategy: {
+    timestamp: string;
+    files: string[];
+  };
+}
+```
+
+**Step 3.2: Generate Modification Plan**
+
+```markdown
+## 修改计划
+
+### 影响范围
+- [ ] IMPL_PLAN.md: 更新技术方案第 3 节
+- [ ] TODO_LIST.md: 添加 2 个新任务,删除 1 个废弃任务
+- [ ] IMPL-001.json: 更新实现方案
+- [ ] workflow-session.json: 更新任务计数
+
+### 变更操作
+1. **创建**: IMPL-004.json (双因素认证实现)
+2. **更新**: IMPL-001.json (添加 2FA 准备工作)
+3. **删除**: IMPL-003.json (已被新方案替代)
+```
+
+**Step 3.3: User Confirmation**
+
+```javascript
+Options:
+- 确认执行: 开始应用所有修改
+- 调整计划: 重新回答问题调整范围
+- 取消操作: 放弃本次重规划
+```
+
+**Output**: Modification plan confirmed or adjusted
+
+---
+
+### Phase 4: Backup Creation
+
+**Process**:
+
+1. **Create Backup Directory**:
+```bash
+timestamp=$(date -u +"%Y-%m-%dT%H-%M-%S")
+backup_dir=".workflow/active/$SESSION_ID/.process/backup/replan-$timestamp"
+mkdir -p "$backup_dir"
+```
+
+2. **Backup All Affected Files**:
+   - IMPL_PLAN.md
+   - TODO_LIST.md
+   - workflow-session.json
+   - Affected task JSONs
+
+3. **Create Backup Manifest**:
+```markdown
+# Replan Backup Manifest
+
+**Timestamp**: {timestamp}
+**Reason**: {replan_reason}
+**Scope**: {modification_scope}
+
+## Restoration Command
+cp {backup_dir}/* .workflow/active/{session}/
+```
+
+**Output**: All files safely backed up with manifest
+
+---
+
+### Phase 5: Apply Modifications
+
+**Step 5.1: Update IMPL_PLAN.md** (if needed)
+
+Use Edit tool to modify specific sections:
+- Update affected technical sections
+- Update modification date
+
+**Step 5.2: Update TODO_LIST.md** (if needed)
+
+- Add new tasks with `[ ]` checkbox
+- Mark deleted tasks as `[x] ~~task~~ (已废弃)`
+- Update modified task descriptions
+
+**Step 5.3: Update Task JSONs**
+
+For each affected task:
+```typescript
+const updated_task = {
+  ...task,
+  context: {
+    ...task.context,
+    requirements: [...updated_requirements],
+    acceptance: [...updated_acceptance]
+  },
+  flow_control: {
+    ...task.flow_control,
+    implementation_approach: [...updated_steps]
+  }
+};
+
+Write({
+  file_path: `.workflow/active/${SESSION_ID}/.task/${task_id}.json`,
+  content: JSON.stringify(updated_task, null, 2)
+});
+```
+
+**Step 5.4: Create New Tasks** (if needed)
+
+Generate complete task JSON with all required fields:
+- id, title, status
+- meta (type, agent)
+- context (requirements, focus_paths, acceptance)
+- flow_control (pre_analysis, implementation_approach, target_files)
+
+**Step 5.5: Delete Obsolete Tasks** (if needed)
+
+Move to backup instead of hard delete:
+```bash
+mv ".workflow/active/$SESSION_ID/.task/{task-id}.json" "$backup_dir/"
+```
+
+**Step 5.6: Update Session Metadata**
+
+Update workflow-session.json:
+- progress.current_tasks
+- progress.last_replan
+- replan_history array
+
+**Output**: All modifications applied, artifacts updated
+
+---
+
+### Phase 6: Verification & Summary
+
+**Step 6.1: Verify Consistency**
+
+1. Validate all task JSONs are valid JSON
+2. Check task count within limits (max 10)
+3. Verify dependency graph is acyclic
+
+**Step 6.2: Generate Change Summary**
+
+```markdown
+## 重规划完成
+
+### 会话信息
+- **Session**: {session-id}
+- **时间**: {timestamp}
+- **备份**: {backup-path}
+
+### 变更摘要
+**范围**: {scope}
+**原因**: {reason}
+
+### 修改的文件
+- ✓ IMPL_PLAN.md: {changes}
+- ✓ TODO_LIST.md: {changes}
+- ✓ Task JSONs: {count} files updated
+
+### 任务变更
+- **新增**: {task-ids}
+- **删除**: {task-ids}
+- **更新**: {task-ids}
+
+### 回滚方法
+cp {backup-path}/* .workflow/active/{session}/
+```
+
+**Output**: Summary displayed, replan complete
+
+---
+
+## TodoWrite Progress Tracking
+
+### Session Mode Progress
+
+```json
+[
+  {"content": "检测模式和发现会话", "status": "completed", "activeForm": "检测模式和发现会话"},
+  {"content": "交互式需求明确", "status": "completed", "activeForm": "交互式需求明确"},
+  {"content": "影响分析和计划生成", "status": "completed", "activeForm": "影响分析和计划生成"},
+  {"content": "创建备份", "status": "completed", "activeForm": "创建备份"},
+  {"content": "更新会话产出文件", "status": "completed", "activeForm": "更新会话产出文件"},
+  {"content": "验证一致性", "status": "completed", "activeForm": "验证一致性"}
+]
+```
+
+### Task Mode Progress
+
+```json
+[
+  {"content": "检测会话和加载任务", "status": "completed", "activeForm": "检测会话和加载任务"},
+  {"content": "交互式更新确认", "status": "completed", "activeForm": "交互式更新确认"},
+  {"content": "应用任务修改", "status": "completed", "activeForm": "应用任务修改"}
+]
+```
+
+## Error Handling
+
+### Session Errors
+
+```bash
+# No active session found
+ERROR: No active session found
+Run /workflow:session:start to create a session
+
+# Session not found
+ERROR: Session WFS-invalid not found
+Available sessions: [list]
+
+# No changes specified
+WARNING: No modifications specified
+Use --interactive mode or provide requirements
+```
+
+### Task Errors
+
+```bash
+# Task not found
+ERROR: Task IMPL-999 not found in session
+Available tasks: [list]
+
+# Task completed
+WARNING: Task IMPL-001 is completed
+Consider creating new task for additional work
+
+# Circular dependency
+ERROR: Circular dependency detected
+Resolve dependency conflicts before proceeding
+```
+
+### Validation Errors
+
+```bash
+# Task limit exceeded
+ERROR: Replan would create 12 tasks (limit: 10)
+Consider: combining tasks, splitting sessions, or removing tasks
+
+# Invalid JSON
+ERROR: Generated invalid JSON
+Backup preserved, rolling back changes
+```
+
+## File Structure
+
+```
+.workflow/active/WFS-session-name/
+├── workflow-session.json
+├── IMPL_PLAN.md
+├── TODO_LIST.md
+├── .task/
+│   ├── IMPL-001.json
+│   ├── IMPL-002.json
+│   └── IMPL-003.json
+└── .process/
+    ├── context-package.json
+    └── backup/
+        └── replan-{timestamp}/
+            ├── MANIFEST.md
+            ├── IMPL_PLAN.md
+            ├── TODO_LIST.md
+            ├── workflow-session.json
+            └── IMPL-*.json
+```
+
+## Examples
+
+### Session Replan - Add Feature
+
+```bash
+/workflow:replan "添加双因素认证支持"
+
+# Interactive clarification
+Q: 修改范围?
+A: 全面重规划
+
+Q: 受影响模块?
+A: 认证模块, API接口
+
+Q: 任务变更?
+A: 添加新任务, 更新内容
+
+# Execution
+✓ 创建备份
+✓ 更新 IMPL_PLAN.md
+✓ 更新 TODO_LIST.md
+✓ 创建 IMPL-004.json
+✓ 更新 IMPL-001.json, IMPL-002.json
+
+重规划完成! 新增 1 任务,更新 2 任务
+```
+
+### Task Replan - Update Requirements
+
+```bash
+/workflow:replan IMPL-001 "支持 OAuth2.0 标准"
+
+# Interactive clarification
+Q: 更新部分?
+A: 需求和验收标准, 实现方案
+
+Q: 影响其他任务?
+A: 是,需要同步更新依赖任务
+
+# Execution
+✓ 创建备份
+✓ 更新 IMPL-001.json
+✓ 更新 IMPL-002.json (依赖任务)
+
+任务重规划完成! 更新 2 个任务
+```

.claude/commands/workflow/review.md

@@ -39,17 +39,17 @@ argument-hint: "[--type=security|architecture|action-items|quality] [optional: s
 if [ -n "$SESSION_ARG" ]; then
     sessionId="$SESSION_ARG"
 else
-    sessionId=$(find .workflow/ -name '.active-*' | head -1 | sed 's/.*active-//')
+    sessionId=$(find .workflow/active/ -name "WFS-*" -type d | head -1 | xargs basename)
 fi
 
 # Step 2: Validation
-if [ ! -d ".workflow/${sessionId}" ]; then
+if [ ! -d ".workflow/active/${sessionId}" ]; then
     echo "Session ${sessionId} not found"
     exit 1
 fi
 
 # Check for completed tasks
-if [ ! -d ".workflow/${sessionId}/.summaries" ] || [ -z "$(find .workflow/${sessionId}/.summaries/ -name "IMPL-*.md" -type f 2>/dev/null)" ]; then
+if [ ! -d ".workflow/active/${sessionId}/.summaries" ] || [ -z "$(find .workflow/active/${sessionId}/.summaries/ -name "IMPL-*.md" -type f 2>/dev/null)" ]; then
     echo "No completed implementation found. Complete implementation first"
     exit 1
 fi
@@ -80,13 +80,13 @@ After bash validation, the model takes control to:
 1. **Load Context**: Read completed task summaries and changed files
    ```bash
    # Load implementation summaries
-   cat .workflow/${sessionId}/.summaries/IMPL-*.md
+   cat .workflow/active/${sessionId}/.summaries/IMPL-*.md
 
    # Load test results (if available)
-   cat .workflow/${sessionId}/.summaries/TEST-FIX-*.md 2>/dev/null
+   cat .workflow/active/${sessionId}/.summaries/TEST-FIX-*.md 2>/dev/null
 
    # Get changed files
-   git log --since="$(cat .workflow/${sessionId}/workflow-session.json | jq -r .created_at)" --name-only --pretty=format: | sort -u
+   git log --since="$(cat .workflow/active/${sessionId}/workflow-session.json | jq -r .created_at)" --name-only --pretty=format: | sort -u
    ```
 
 2. **Perform Specialized Review**: Based on `review_type`
@@ -99,7 +99,7 @@ After bash validation, the model takes control to:
      ```
    - Use Gemini for security analysis:
      ```bash
-     cd .workflow/${sessionId} && gemini -p "
+     cd .workflow/active/${sessionId} && gemini -p "
      PURPOSE: Security audit of completed implementation
      TASK: Review code for security vulnerabilities, insecure patterns, auth/authz issues
      CONTEXT: @.summaries/IMPL-*.md,../.. @../../CLAUDE.md
@@ -111,7 +111,7 @@ After bash validation, the model takes control to:
    **Architecture Review** (`--type=architecture`):
    - Use Qwen for architecture analysis:
      ```bash
-     cd .workflow/${sessionId} && qwen -p "
+     cd .workflow/active/${sessionId} && qwen -p "
      PURPOSE: Architecture compliance review
      TASK: Evaluate adherence to architectural patterns, identify technical debt, review design decisions
      CONTEXT: @.summaries/IMPL-*.md,../.. @../../CLAUDE.md
@@ -123,7 +123,7 @@ After bash validation, the model takes control to:
    **Quality Review** (`--type=quality`):
    - Use Gemini for code quality:
      ```bash
-     cd .workflow/${sessionId} && gemini -p "
+     cd .workflow/active/${sessionId} && gemini -p "
      PURPOSE: Code quality and best practices review
      TASK: Assess code readability, maintainability, adherence to best practices
      CONTEXT: @.summaries/IMPL-*.md,../.. @../../CLAUDE.md
@@ -136,14 +136,14 @@ After bash validation, the model takes control to:
    - Verify all requirements and acceptance criteria met:
      ```bash
      # Load task requirements and acceptance criteria
-     find .workflow/${sessionId}/.task -name "IMPL-*.json" -exec jq -r '
+     find .workflow/active/${sessionId}/.task -name "IMPL-*.json" -exec jq -r '
        "Task: " + .id + "\n" +
        "Requirements: " + (.context.requirements | join(", ")) + "\n" +
        "Acceptance: " + (.context.acceptance | join(", "))
      ' {} \;
 
      # Check implementation summaries against requirements
-     cd .workflow/${sessionId} && gemini -p "
+     cd .workflow/active/${sessionId} && gemini -p "
      PURPOSE: Verify all requirements and acceptance criteria are met
      TASK: Cross-check implementation summaries against original requirements
      CONTEXT: @.task/IMPL-*.json,.summaries/IMPL-*.md,../.. @../../CLAUDE.md
@@ -195,7 +195,7 @@ After bash validation, the model takes control to:
 4. **Output Files**:
    ```bash
    # Save review report
-   Write(.workflow/${sessionId}/REVIEW-${review_type}.md)
+   Write(.workflow/active/${sessionId}/REVIEW-${review_type}.md)
 
    # Update session metadata
    # (optional) Update workflow-session.json with review status

.claude/commands/workflow/session/complete.md

@@ -19,129 +19,472 @@ Mark the currently active workflow session as complete, analyze it for lessons l
 
 ## Implementation Flow
 
-### Phase 1: Prepare for Archival (Minimal Manual Operations)
+### Phase 1: Pre-Archival Preparation (Transactional Setup)
 
-**Purpose**: Find active session, move to archive location, pass control to agent. Minimal operations.
+**Purpose**: Find active session, create archiving marker to prevent concurrent operations. Session remains in active location for agent processing.
 
 #### Step 1.1: Find Active Session and Get Name
 ```bash
-# Find active marker
-bash(find .workflow/ -name ".active-*" -type f | head -1)
+# Find active session directory
+bash(find .workflow/active/ -name "WFS-*" -type d | head -1)
 
-# Extract session name from marker path
-bash(basename .workflow/.active-WFS-session-name | sed 's/^\.active-//')
+# Extract session name from directory path
+bash(basename .workflow/active/WFS-session-name)
 ```
 **Output**: Session name `WFS-session-name`
 
-#### Step 1.2: Move Session to Archive
+#### Step 1.2: Check for Existing Archiving Marker (Resume Detection)
 ```bash
-# Create archive directory if needed
-bash(mkdir -p .workflow/.archives/)
-
-# Move session to archive location
-bash(mv .workflow/WFS-session-name .workflow/.archives/WFS-session-name)
+# Check if session is already being archived
+bash(test -f .workflow/active/WFS-session-name/.archiving && echo "RESUMING" || echo "NEW")
 ```
-**Result**: Session now at `.workflow/.archives/WFS-session-name/`
 
-### Phase 2: Agent-Orchestrated Completion (All Data Processing)
+**If RESUMING**:
+- Previous archival attempt was interrupted
+- Skip to Phase 2 to resume agent analysis
 
-**Purpose**: Agent analyzes archived session, generates metadata, updates manifest, and removes active marker.
+**If NEW**:
+- Continue to Step 1.3
+
+#### Step 1.3: Create Archiving Marker
+```bash
+# Mark session as "archiving in progress"
+bash(touch .workflow/active/WFS-session-name/.archiving)
+```
+**Purpose**:
+- Prevents concurrent operations on this session
+- Enables recovery if archival fails
+- Session remains in `.workflow/active/` for agent analysis
+
+**Result**: Session still at `.workflow/active/WFS-session-name/` with `.archiving` marker
+
+### Phase 2: Agent Analysis (In-Place Processing)
+
+**Purpose**: Agent analyzes session WHILE STILL IN ACTIVE LOCATION. Generates metadata but does NOT move files or update manifest.
 
 #### Agent Invocation
 
-Invoke `universal-executor` agent to complete the archival process.
+Invoke `universal-executor` agent to analyze session and prepare archive metadata.
 
 **Agent Task**:
 ```
 Task(
   subagent_type="universal-executor",
-  description="Complete session archival",
+  description="Analyze session for archival",
   prompt=`
-Complete workflow session archival. Session already moved to archive location.
+Analyze workflow session for archival preparation. Session is STILL in active location.
 
 ## Context
-- Session: .workflow/.archives/WFS-session-name/
-- Active marker: .workflow/.active-WFS-session-name
+- Session: .workflow/active/WFS-session-name/
+- Status: Marked as archiving (.archiving marker present)
+- Location: Active sessions directory (NOT archived yet)
 
 ## Tasks
 
-1. **Extract session data** from workflow-session.json (session_id, description/topic, started_at/timestamp, completed_at, status)
+1. **Extract session data** from workflow-session.json
+   - session_id, description/topic, started_at, completed_at, status
    - If status != "completed", update it with timestamp
 
 2. **Count files**: tasks (.task/*.json) and summaries (.summaries/*.md)
 
-3. **Generate lessons**: Use gemini with ~/.claude/workflows/cli-templates/prompts/archive/analysis-simple.txt (fallback: analyze files directly)
+3. **Generate lessons**: Use gemini with ~/.claude/workflows/cli-templates/prompts/archive/analysis-simple.txt
    - Return: {successes, challenges, watch_patterns}
 
 4. **Build archive entry**:
    - Calculate: duration_hours, success_rate, tags (3-5 keywords)
-   - Construct complete JSON with session_id, description, archived_at, archive_path, metrics, tags, lessons
+   - Construct complete JSON with session_id, description, archived_at, metrics, tags, lessons
+   - Include archive_path: ".workflow/archives/WFS-session-name" (future location)
 
-5. **Update manifest**: Initialize .workflow/.archives/manifest.json if needed, append entry
+5. **Extract feature metadata** (for Phase 4):
+   - Parse IMPL_PLAN.md for title (first # heading)
+   - Extract description (first paragraph, max 200 chars)
+   - Generate feature tags (3-5 keywords from content)
 
-6. **Remove active marker**
+6. **Return result**: Complete metadata package for atomic commit
+   {
+     "status": "success",
+     "session_id": "WFS-session-name",
+     "archive_entry": {
+       "session_id": "...",
+       "description": "...",
+       "archived_at": "...",
+       "archive_path": ".workflow/archives/WFS-session-name",
+       "metrics": {...},
+       "tags": [...],
+       "lessons": {...}
+     },
+     "feature_metadata": {
+       "title": "...",
+       "description": "...",
+       "tags": [...]
+     }
+   }
 
-7. **Return result**: {"status": "success", "session_id": "...", "archived_at": "...", "metrics": {...}, "lessons_summary": {...}}
+## Important Constraints
+- DO NOT move or delete any files
+- DO NOT update manifest.json yet
+- Session remains in .workflow/active/ during analysis
+- Return complete metadata package for orchestrator to commit atomically
 
 ## Error Handling
 - On failure: return {"status": "error", "task": "...", "message": "..."}
-- Do NOT remove marker if failed
+- Do NOT modify any files on error
   `
 )
 ```
 
 **Expected Output**:
-- Agent returns JSON result confirming successful archival
-- Display completion summary to user based on agent response
+- Agent returns complete metadata package
+- Session remains in `.workflow/active/` with `.archiving` marker
+- No files moved or manifests updated yet
+
+### Phase 3: Atomic Commit (Transactional File Operations)
+
+**Purpose**: Atomically commit all changes. Only execute if Phase 2 succeeds.
+
+#### Step 3.1: Create Archive Directory
+```bash
+bash(mkdir -p .workflow/archives/)
+```
+
+#### Step 3.2: Move Session to Archive
+```bash
+bash(mv .workflow/active/WFS-session-name .workflow/archives/WFS-session-name)
+```
+**Result**: Session now at `.workflow/archives/WFS-session-name/`
+
+#### Step 3.3: Update Manifest
+```bash
+# Read current manifest (or create empty array if not exists)
+bash(test -f .workflow/archives/manifest.json && cat .workflow/archives/manifest.json || echo "[]")
+```
+
+**JSON Update Logic**:
+```javascript
+// Read agent result from Phase 2
+const agentResult = JSON.parse(agentOutput);
+const archiveEntry = agentResult.archive_entry;
+
+// Read existing manifest
+let manifest = [];
+try {
+  const manifestContent = Read('.workflow/archives/manifest.json');
+  manifest = JSON.parse(manifestContent);
+} catch {
+  manifest = []; // Initialize if not exists
+}
+
+// Append new entry
+manifest.push(archiveEntry);
+
+// Write back
+Write('.workflow/archives/manifest.json', JSON.stringify(manifest, null, 2));
+```
+
+#### Step 3.4: Remove Archiving Marker
+```bash
+bash(rm .workflow/archives/WFS-session-name/.archiving)
+```
+**Result**: Clean archived session without temporary markers
+
+**Output Confirmation**:
+```
+✓ Session "${sessionId}" archived successfully
+  Location: .workflow/archives/WFS-session-name/
+  Lessons: ${archiveEntry.lessons.successes.length} successes, ${archiveEntry.lessons.challenges.length} challenges
+  Manifest: Updated with ${manifest.length} total sessions
+```
+
+### Phase 4: Update Project Feature Registry
+
+**Purpose**: Record completed session as a project feature in `.workflow/project.json`.
+
+**Execution**: Uses feature metadata from Phase 2 agent result to update project registry.
+
+#### Step 4.1: Check Project State Exists
+```bash
+bash(test -f .workflow/project.json && echo "EXISTS" || echo "SKIP")
+```
+
+**If SKIP**: Output warning and skip Phase 4
+```
+WARNING: No project.json found. Run /workflow:session:start to initialize.
+```
+
+#### Step 4.2: Extract Feature Information from Agent Result
+
+**Data Processing** (Uses Phase 2 agent output):
+```javascript
+// Extract feature metadata from agent result
+const agentResult = JSON.parse(agentOutput);
+const featureMeta = agentResult.feature_metadata;
+
+// Data already prepared by agent:
+const title = featureMeta.title;
+const description = featureMeta.description;
+const tags = featureMeta.tags;
+
+// Create feature ID (lowercase slug)
+const featureId = title.toLowerCase().replace(/[^a-z0-9]+/g, '-').substring(0, 50);
+```
+
+#### Step 4.3: Update project.json
+
+```bash
+# Read current project state
+bash(cat .workflow/project.json)
+```
+
+**JSON Update Logic**:
+```javascript
+// Read existing project.json (created by /workflow:init)
+// Note: overview field is managed by /workflow:init, not modified here
+const projectMeta = JSON.parse(Read('.workflow/project.json'));
+const currentTimestamp = new Date().toISOString();
+const currentDate = currentTimestamp.split('T')[0]; // YYYY-MM-DD
+
+// Extract tags from IMPL_PLAN.md (simple keyword extraction)
+const tags = extractTags(planContent); // e.g., ["auth", "security"]
+
+// Build feature object with complete metadata
+const newFeature = {
+  id: featureId,
+  title: title,
+  description: description,
+  status: "completed",
+  tags: tags,
+  timeline: {
+    created_at: currentTimestamp,
+    implemented_at: currentDate,
+    updated_at: currentTimestamp
+  },
+  traceability: {
+    session_id: sessionId,
+    archive_path: archivePath, // e.g., ".workflow/archives/WFS-auth-system"
+    commit_hash: getLatestCommitHash() || "" // Optional: git rev-parse HEAD
+  },
+  docs: [],      // Placeholder for future doc links
+  relations: []  // Placeholder for feature dependencies
+};
+
+// Add new feature to array
+projectMeta.features.push(newFeature);
+
+// Update statistics
+projectMeta.statistics.total_features = projectMeta.features.length;
+projectMeta.statistics.total_sessions += 1;
+projectMeta.statistics.last_updated = currentTimestamp;
+
+// Write back
+Write('.workflow/project.json', JSON.stringify(projectMeta, null, 2));
+```
+
+**Helper Functions**:
+```javascript
+// Extract tags from IMPL_PLAN.md content
+function extractTags(planContent) {
+  const tags = [];
+
+  // Look for common keywords
+  const keywords = {
+    'auth': /authentication|login|oauth|jwt/i,
+    'security': /security|encrypt|hash|token/i,
+    'api': /api|endpoint|rest|graphql/i,
+    'ui': /component|page|interface|frontend/i,
+    'database': /database|schema|migration|sql/i,
+    'test': /test|testing|spec|coverage/i
+  };
+
+  for (const [tag, pattern] of Object.entries(keywords)) {
+    if (pattern.test(planContent)) {
+      tags.push(tag);
+    }
+  }
+
+  return tags.slice(0, 5); // Max 5 tags
+}
+
+// Get latest git commit hash (optional)
+function getLatestCommitHash() {
+  try {
+    const result = Bash({
+      command: "git rev-parse --short HEAD 2>/dev/null",
+      description: "Get latest commit hash"
+    });
+    return result.trim();
+  } catch {
+    return "";
+  }
+}
+```
+
+#### Step 4.4: Output Confirmation
+
+```
+✓ Feature "${title}" added to project registry
+  ID: ${featureId}
+  Session: ${sessionId}
+  Location: .workflow/project.json
+```
+
+**Error Handling**:
+- If project.json malformed: Output error, skip update
+- If feature_metadata missing from agent result: Skip Phase 4
+- If extraction fails: Use minimal defaults
+
+**Phase 4 Total Commands**: 1 bash read + JSON manipulation
+
+## Error Recovery
+
+### If Agent Fails (Phase 2)
+
+**Symptoms**:
+- Agent returns `{"status": "error", ...}`
+- Agent crashes or times out
+- Analysis incomplete
+
+**Recovery Steps**:
+```bash
+# Session still in .workflow/active/WFS-session-name
+# Remove archiving marker
+bash(rm .workflow/active/WFS-session-name/.archiving)
+```
+
+**User Notification**:
+```
+ERROR: Session archival failed during analysis phase
+Reason: [error message from agent]
+Session remains active in: .workflow/active/WFS-session-name
+
+Recovery:
+1. Fix any issues identified in error message
+2. Retry: /workflow:session:complete
+
+Session state: SAFE (no changes committed)
+```
+
+### If Move Fails (Phase 3)
+
+**Symptoms**:
+- `mv` command fails
+- Permission denied
+- Disk full
+
+**Recovery Steps**:
+```bash
+# Archiving marker still present
+# Session still in .workflow/active/ (move failed)
+# No manifest updated yet
+```
+
+**User Notification**:
+```
+ERROR: Session archival failed during move operation
+Reason: [mv error message]
+Session remains in: .workflow/active/WFS-session-name
+
+Recovery:
+1. Fix filesystem issues (permissions, disk space)
+2. Retry: /workflow:session:complete
+   - System will detect .archiving marker
+   - Will resume from Phase 2 (agent analysis)
+
+Session state: SAFE (analysis complete, ready to retry move)
+```
+
+### If Manifest Update Fails (Phase 3)
+
+**Symptoms**:
+- JSON parsing error
+- Write permission denied
+- Session moved but manifest not updated
+
+**Recovery Steps**:
+```bash
+# Session moved to .workflow/archives/WFS-session-name
+# Manifest NOT updated
+# Archiving marker still present in archived location
+```
+
+**User Notification**:
+```
+ERROR: Session archived but manifest update failed
+Reason: [error message]
+Session location: .workflow/archives/WFS-session-name
+
+Recovery:
+1. Fix manifest.json issues (syntax, permissions)
+2. Manual manifest update:
+   - Add archive entry from agent output
+   - Remove .archiving marker: rm .workflow/archives/WFS-session-name/.archiving
+
+Session state: PARTIALLY COMPLETE (session archived, manifest needs update)
+```
 
 ## Workflow Execution Strategy
 
-### Two-Phase Approach (Optimized)
+### Transactional Four-Phase Approach
 
-**Phase 1: Minimal Manual Setup** (2 simple operations)
+**Phase 1: Pre-Archival Preparation** (Marker creation)
 - Find active session and extract name
-- Move session to archive location
-- **No data extraction** - agent handles all data processing
-- **No counting** - agent does this from archive location
-- **Total**: 2 bash commands (find + move)
+- Check for existing `.archiving` marker (resume detection)
+- Create `.archiving` marker if new
+- **No data processing** - just state tracking
+- **Total**: 2-3 bash commands (find + marker check/create)
 
-**Phase 2: Agent-Driven Completion** (1 agent invocation)
-- Extract all session data from archived location
+**Phase 2: Agent Analysis** (Read-only data processing)
+- Extract all session data from active location
 - Count tasks and summaries
 - Generate lessons learned analysis
-- Build complete archive metadata
-- Update manifest
-- Remove active marker
-- Return success/error result
+- Extract feature metadata from IMPL_PLAN.md
+- Build complete archive + feature metadata package
+- **No file modifications** - pure analysis
+- **Total**: 1 agent invocation
 
-## Quick Commands
+**Phase 3: Atomic Commit** (Transactional file operations)
+- Create archive directory
+- Move session to archive location
+- Update manifest.json with archive entry
+- Remove `.archiving` marker
+- **All-or-nothing**: Either all succeed or session remains in safe state
+- **Total**: 4 bash commands + JSON manipulation
 
-```bash
-# Phase 1: Find and move
-bash(find .workflow/ -name ".active-*" -type f | head -1)
-bash(basename .workflow/.active-WFS-session-name | sed 's/^\.active-//')
-bash(mkdir -p .workflow/.archives/)
-bash(mv .workflow/WFS-session-name .workflow/.archives/WFS-session-name)
+**Phase 4: Project Registry Update** (Optional feature tracking)
+- Check project.json exists
+- Use feature metadata from Phase 2 agent result
+- Build feature object with complete traceability
+- Update project statistics
+- **Independent**: Can fail without affecting archival
+- **Total**: 1 bash read + JSON manipulation
 
-# Phase 2: Agent completes archival
-Task(subagent_type="universal-executor", description="Complete session archival", prompt=`...`)
-```
+### Transactional Guarantees
 
-## Archive Query Commands
+**State Consistency**:
+- Session NEVER in inconsistent state
+- `.archiving` marker enables safe resume
+- Agent failure leaves session in recoverable state
+- Move/manifest operations grouped in Phase 3
 
-After archival, you can query the manifest:
+**Failure Isolation**:
+- Phase 1 failure: No changes made
+- Phase 2 failure: Session still active, can retry
+- Phase 3 failure: Clear error state, manual recovery documented
+- Phase 4 failure: Does not affect archival success
 
-```bash
-# List all archived sessions
-jq '.archives[].session_id' .workflow/.archives/manifest.json
+**Resume Capability**:
+- Detect interrupted archival via `.archiving` marker
+- Resume from Phase 2 (skip marker creation)
+- Idempotent operations (safe to retry)
 
-# Find sessions by keyword
-jq '.archives[] | select(.description | test("auth"; "i"))' .workflow/.archives/manifest.json
+### Benefits Over Previous Design
 
-# Get specific session details
-jq '.archives[] | select(.session_id == "WFS-user-auth")' .workflow/.archives/manifest.json
-
-# List all watch patterns across sessions
-jq '.archives[].lessons.watch_patterns[]' .workflow/.archives/manifest.json
-```
+**Old Design Weakness**:
+- Move first → agent second
+- Agent failure → session moved but metadata incomplete
+- Inconsistent state requires manual cleanup
 
+**New Design Strengths**:
+- Agent first → move second
+- Agent failure → session still active, safe to retry
+- Transactional commit → all-or-nothing file operations
+- Marker-based state → resume capability

.claude/commands/workflow/session/list.md

@@ -19,35 +19,35 @@ Display all workflow sessions with their current status, progress, and metadata.
 
 ### Step 1: Find All Sessions
 ```bash
-ls .workflow/WFS-* 2>/dev/null
+ls .workflow/active/WFS-* 2>/dev/null
 ```
 
 ### Step 2: Check Active Session
 ```bash
-ls .workflow/.active-* 2>/dev/null | head -1
+find .workflow/active/ -name "WFS-*" -type d 2>/dev/null | head -1
 ```
 
 ### Step 3: Read Session Metadata
 ```bash
-jq -r '.session_id, .status, .project' .workflow/WFS-session/workflow-session.json
+jq -r '.session_id, .status, .project' .workflow/active/WFS-session/workflow-session.json
 ```
 
 ### Step 4: Count Task Progress
 ```bash
-find .workflow/WFS-session/.task/ -name "*.json" -type f 2>/dev/null | wc -l
-find .workflow/WFS-session/.summaries/ -name "*.md" -type f 2>/dev/null | wc -l
+find .workflow/active/WFS-session/.task/ -name "*.json" -type f 2>/dev/null | wc -l
+find .workflow/active/WFS-session/.summaries/ -name "*.md" -type f 2>/dev/null | wc -l
 ```
 
 ### Step 5: Get Creation Time
 ```bash
-jq -r '.created_at // "unknown"' .workflow/WFS-session/workflow-session.json
+jq -r '.created_at // "unknown"' .workflow/active/WFS-session/workflow-session.json
 ```
 
 ## Simple Bash Commands
 
 ### Basic Operations
-- **List sessions**: `find .workflow/ -maxdepth 1 -type d -name "WFS-*"`
-- **Find active**: `find .workflow/ -name ".active-*" -type f`
+- **List sessions**: `find .workflow/active/ -name "WFS-*" -type d`
+- **Find active**: `find .workflow/active/ -name "WFS-*" -type d`
 - **Read session data**: `jq -r '.session_id, .status' session.json`
 - **Count tasks**: `find .task/ -name "*.json" -type f | wc -l`
 - **Count completed**: `find .summaries/ -name "*.md" -type f 2>/dev/null | wc -l`
@@ -89,11 +89,8 @@ Total: 3 sessions (1 active, 1 paused, 1 completed)
 ### Quick Commands
 ```bash
 # Count all sessions
-ls .workflow/WFS-* | wc -l
-
-# Show only active
-ls .workflow/.active-* | basename | sed 's/^\.active-//'
+ls .workflow/active/WFS-* | wc -l
 
 # Show recent sessions
-ls -t .workflow/WFS-*/workflow-session.json | head -3
+ls -t .workflow/active/WFS-*/workflow-session.json | head -3
 ```

.claude/commands/workflow/session/resume.md

@@ -17,45 +17,39 @@ Resume the most recently paused workflow session, restoring all context and stat
 
 ### Step 1: Find Paused Sessions
 ```bash
-ls .workflow/WFS-* 2>/dev/null
+ls .workflow/active/WFS-* 2>/dev/null
 ```
 
 ### Step 2: Check Session Status
 ```bash
-jq -r '.status' .workflow/WFS-session/workflow-session.json
+jq -r '.status' .workflow/active/WFS-session/workflow-session.json
 ```
 
 ### Step 3: Find Most Recent Paused
 ```bash
-ls -t .workflow/WFS-*/workflow-session.json | head -1
+ls -t .workflow/active/WFS-*/workflow-session.json | head -1
 ```
 
 ### Step 4: Update Session Status
 ```bash
-jq '.status = "active"' .workflow/WFS-session/workflow-session.json > temp.json
-mv temp.json .workflow/WFS-session/workflow-session.json
+jq '.status = "active"' .workflow/active/WFS-session/workflow-session.json > temp.json
+mv temp.json .workflow/active/WFS-session/workflow-session.json
 ```
 
 ### Step 5: Add Resume Timestamp
 ```bash
-jq '.resumed_at = "'$(date -u +%Y-%m-%dT%H:%M:%SZ)'"' .workflow/WFS-session/workflow-session.json > temp.json
-mv temp.json .workflow/WFS-session/workflow-session.json
-```
-
-### Step 6: Create Active Marker
-```bash
-touch .workflow/.active-WFS-session-name
+jq '.resumed_at = "'$(date -u +%Y-%m-%dT%H:%M:%SZ)'"' .workflow/active/WFS-session/workflow-session.json > temp.json
+mv temp.json .workflow/active/WFS-session/workflow-session.json
 ```
 
 ## Simple Bash Commands
 
 ### Basic Operations
-- **List sessions**: `ls .workflow/WFS-*`
+- **List sessions**: `ls .workflow/active/WFS-*`
 - **Check status**: `jq -r '.status' session.json`
-- **Find recent**: `ls -t .workflow/*/workflow-session.json | head -1`
+- **Find recent**: `ls -t .workflow/active/*/workflow-session.json | head -1`
 - **Update status**: `jq '.status = "active"' session.json > temp.json`
 - **Add timestamp**: `jq '.resumed_at = "'$(date -u +%Y-%m-%dT%H:%M:%SZ)'"'`
-- **Create marker**: `touch .workflow/.active-session`
 
 ### Resume Result
 ```

.claude/commands/workflow/session/start.md

@@ -13,6 +13,35 @@ examples:
 ## Overview
 Manages workflow sessions with three operation modes: discovery (manual), auto (intelligent), and force-new.
 
+**Dual Responsibility**:
+1. **Project-level initialization** (first-time only): Creates `.workflow/project.json` for feature registry
+2. **Session-level initialization** (always): Creates session directory structure
+
+## Step 0: Initialize Project State (First-time Only)
+
+**Executed before all modes** - Ensures project-level state file exists by calling `/workflow:init`.
+
+### Check and Initialize
+```bash
+# Check if project state exists
+bash(test -f .workflow/project.json && echo "EXISTS" || echo "NOT_FOUND")
+```
+
+**If NOT_FOUND**, delegate to `/workflow:init`:
+```javascript
+// Call workflow:init for intelligent project analysis
+SlashCommand({command: "/workflow:init"});
+
+// Wait for init completion
+// project.json will be created with comprehensive project overview
+```
+
+**Output**:
+- If EXISTS: `PROJECT_STATE: initialized`
+- If NOT_FOUND: Calls `/workflow:init` → creates `.workflow/project.json` with full project analysis
+
+**Note**: `/workflow:init` uses cli-explore-agent to build comprehensive project understanding (technology stack, architecture, key components). This step runs once per project. Subsequent executions skip initialization.
+
 ## Mode 1: Discovery Mode (Default)
 
 ### Usage
@@ -20,19 +49,14 @@ Manages workflow sessions with three operation modes: discovery (manual), auto (
 /workflow:session:start
 ```
 
-### Step 1: Check Active Sessions
+### Step 1: List Active Sessions
 ```bash
-bash(ls .workflow/.active-* 2>/dev/null)
+bash(ls -1 .workflow/active/ 2>/dev/null | head -5)
 ```
 
-### Step 2: List All Sessions
+### Step 2: Display Session Metadata
 ```bash
-bash(ls -1 .workflow/WFS-* 2>/dev/null | head -5)
-```
-
-### Step 3: Display Session Metadata
-```bash
-bash(cat .workflow/WFS-promptmaster-platform/workflow-session.json)
+bash(cat .workflow/active/WFS-promptmaster-platform/workflow-session.json)
 ```
 
 ### Step 4: User Decision
@@ -49,7 +73,7 @@ Present session information and wait for user to select or create session.
 
 ### Step 1: Check Active Sessions Count
 ```bash
-bash(ls .workflow/.active-* 2>/dev/null | wc -l)
+bash(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null | wc -l)
 ```
 
 ### Step 2a: No Active Sessions → Create New
@@ -58,15 +82,12 @@ bash(ls .workflow/.active-* 2>/dev/null | wc -l)
 bash(echo "implement OAuth2 auth" | sed 's/[^a-zA-Z0-9]/-/g' | tr '[:upper:]' '[:lower:]' | cut -c1-50)
 
 # Create directory structure
-bash(mkdir -p .workflow/WFS-implement-oauth2-auth/.process)
-bash(mkdir -p .workflow/WFS-implement-oauth2-auth/.task)
-bash(mkdir -p .workflow/WFS-implement-oauth2-auth/.summaries)
+bash(mkdir -p .workflow/active/WFS-implement-oauth2-auth/.process)
+bash(mkdir -p .workflow/active/WFS-implement-oauth2-auth/.task)
+bash(mkdir -p .workflow/active/WFS-implement-oauth2-auth/.summaries)
 
 # Create metadata
-bash(echo '{"session_id":"WFS-implement-oauth2-auth","project":"implement OAuth2 auth","status":"planning"}' > .workflow/WFS-implement-oauth2-auth/workflow-session.json)
-
-# Mark as active
-bash(touch .workflow/.active-WFS-implement-oauth2-auth)
+bash(echo '{"session_id":"WFS-implement-oauth2-auth","project":"implement OAuth2 auth","status":"planning"}' > .workflow/active/WFS-implement-oauth2-auth/workflow-session.json)
 ```
 
 **Output**: `SESSION_ID: WFS-implement-oauth2-auth`
@@ -74,10 +95,10 @@ bash(touch .workflow/.active-WFS-implement-oauth2-auth)
 ### Step 2b: Single Active Session → Check Relevance
 ```bash
 # Extract session ID
-bash(ls .workflow/.active-* 2>/dev/null | head -1 | xargs basename | sed 's/^\.active-//')
+bash(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null | head -1 | xargs basename)
 
 # Read project name from metadata
-bash(cat .workflow/WFS-promptmaster-platform/workflow-session.json | grep -o '"project":"[^"]*"' | cut -d'"' -f4)
+bash(cat .workflow/active/WFS-promptmaster-platform/workflow-session.json | grep -o '"project":"[^"]*"' | cut -d'"' -f4)
 
 # Check keyword match (manual comparison)
 # If task contains project keywords → Reuse session
@@ -90,7 +111,7 @@ bash(cat .workflow/WFS-promptmaster-platform/workflow-session.json | grep -o '"p
 ### Step 2c: Multiple Active Sessions → Use First
 ```bash
 # Get first active session
-bash(ls .workflow/.active-* 2>/dev/null | head -1 | xargs basename | sed 's/^\.active-//')
+bash(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null | head -1 | xargs basename)
 
 # Output warning and session ID
 # WARNING: Multiple active sessions detected
@@ -110,25 +131,19 @@ bash(ls .workflow/.active-* 2>/dev/null | head -1 | xargs basename | sed 's/^\.a
 bash(echo "fix login bug" | sed 's/[^a-zA-Z0-9]/-/g' | tr '[:upper:]' '[:lower:]' | cut -c1-50)
 
 # Check if exists, add counter if needed
-bash(ls .workflow/WFS-fix-login-bug 2>/dev/null && echo "WFS-fix-login-bug-2" || echo "WFS-fix-login-bug")
+bash(ls .workflow/active/WFS-fix-login-bug 2>/dev/null && echo "WFS-fix-login-bug-2" || echo "WFS-fix-login-bug")
 ```
 
 ### Step 2: Create Session Structure
 ```bash
-bash(mkdir -p .workflow/WFS-fix-login-bug/.process)
-bash(mkdir -p .workflow/WFS-fix-login-bug/.task)
-bash(mkdir -p .workflow/WFS-fix-login-bug/.summaries)
+bash(mkdir -p .workflow/active/WFS-fix-login-bug/.process)
+bash(mkdir -p .workflow/active/WFS-fix-login-bug/.task)
+bash(mkdir -p .workflow/active/WFS-fix-login-bug/.summaries)
 ```
 
 ### Step 3: Create Metadata
 ```bash
-bash(echo '{"session_id":"WFS-fix-login-bug","project":"fix login bug","status":"planning"}' > .workflow/WFS-fix-login-bug/workflow-session.json)
-```
-
-### Step 4: Mark Active and Clean Old Markers
-```bash
-bash(rm .workflow/.active-* 2>/dev/null)
-bash(touch .workflow/.active-WFS-fix-login-bug)
+bash(echo '{"session_id":"WFS-fix-login-bug","project":"fix login bug","status":"planning"}' > .workflow/active/WFS-fix-login-bug/workflow-session.json)
 ```
 
 **Output**: `SESSION_ID: WFS-fix-login-bug`
@@ -173,41 +188,6 @@ SlashCommand(command="/workflow:session:start")
 SlashCommand(command="/workflow:session:start --new \"experimental feature\"")
 ```
 
-## Simple Bash Commands
-
-### Basic Operations
-```bash
-# Check active sessions
-bash(ls .workflow/.active-*)
-
-# List all sessions
-bash(ls .workflow/WFS-*)
-
-# Read session metadata
-bash(cat .workflow/WFS-[session-id]/workflow-session.json)
-
-# Create session directories
-bash(mkdir -p .workflow/WFS-[session-id]/.process)
-bash(mkdir -p .workflow/WFS-[session-id]/.task)
-bash(mkdir -p .workflow/WFS-[session-id]/.summaries)
-
-# Mark session as active
-bash(touch .workflow/.active-WFS-[session-id])
-
-# Clean active markers
-bash(rm .workflow/.active-*)
-```
-
-### Generate Session Slug
-```bash
-bash(echo "Task Description" | sed 's/[^a-zA-Z0-9]/-/g' | tr '[:upper:]' '[:lower:]' | cut -c1-50)
-```
-
-### Create Metadata JSON
-```bash
-bash(echo '{"session_id":"WFS-test","project":"test project","status":"planning"}' > .workflow/WFS-test/workflow-session.json)
-```
-
 ## Session ID Format
 - Pattern: `WFS-[lowercase-slug]`
 - Characters: `a-z`, `0-9`, `-` only

.claude/commands/workflow/status.md

@@ -1,47 +1,185 @@
 ---
 name: workflow:status
-description: Generate on-demand task status views from JSON task data with optional task-id filtering for detailed view
-argument-hint: "[optional: task-id]"
+description: Generate on-demand views for project overview and workflow tasks with optional task-id filtering for detailed view
+argument-hint: "[optional: --project|task-id|--validate|--dashboard]"
 ---
 
 # Workflow Status Command (/workflow:status)
 
 ## Overview
-Generates on-demand views from JSON task data. No synchronization needed - all views are calculated from the current state of JSON files.
+Generates on-demand views from project and session data. Supports multiple modes:
+1. **Project Overview** (`--project`): Shows completed features and project statistics
+2. **Workflow Tasks** (default): Shows current session task progress
+3. **HTML Dashboard** (`--dashboard`): Generates interactive HTML task board with active and archived sessions
+
+No synchronization needed - all views are calculated from current JSON state.
 
 ## Usage
 ```bash
-/workflow:status                    # Show current workflow overview
+/workflow:status                    # Show current workflow session overview
+/workflow:status --project          # Show project-level feature registry
 /workflow:status impl-1             # Show specific task details
 /workflow:status --validate         # Validate workflow integrity
+/workflow:status --dashboard        # Generate HTML dashboard board
 ```
 
 ## Implementation Flow
 
+### Mode Selection
+
+**Check for --project flag**:
+- If `--project` flag present → Execute **Project Overview Mode**
+- Otherwise → Execute **Workflow Session Mode** (default)
+
+## Project Overview Mode
+
+### Step 1: Check Project State
+```bash
+bash(test -f .workflow/project.json && echo "EXISTS" || echo "NOT_FOUND")
+```
+
+**If NOT_FOUND**:
+```
+No project state found.
+Run /workflow:session:start to initialize project.
+```
+
+### Step 2: Read Project Data
+```bash
+bash(cat .workflow/project.json)
+```
+
+### Step 3: Parse and Display
+
+**Data Processing**:
+```javascript
+const projectData = JSON.parse(Read('.workflow/project.json'));
+const features = projectData.features || [];
+const stats = projectData.statistics || {};
+const overview = projectData.overview || null;
+
+// Sort features by implementation date (newest first)
+const sortedFeatures = features.sort((a, b) =>
+  new Date(b.implemented_at) - new Date(a.implemented_at)
+);
+```
+
+**Output Format** (with extended overview):
+```
+## Project: ${projectData.project_name}
+Initialized: ${projectData.initialized_at}
+
+${overview ? `
+### Overview
+${overview.description}
+
+**Technology Stack**:
+${overview.technology_stack.languages.map(l => `- ${l.name}${l.primary ? ' (primary)' : ''}: ${l.file_count} files`).join('\n')}
+Frameworks: ${overview.technology_stack.frameworks.join(', ')}
+
+**Architecture**:
+Style: ${overview.architecture.style}
+Patterns: ${overview.architecture.patterns.join(', ')}
+
+**Key Components** (${overview.key_components.length}):
+${overview.key_components.map(c => `- ${c.name} (${c.path})\n  ${c.description}`).join('\n')}
+
+**Metrics**:
+- Files: ${overview.metrics.total_files}
+- Lines of Code: ${overview.metrics.lines_of_code}
+- Complexity: ${overview.metrics.complexity}
+
+---
+` : ''}
+
+### Completed Features (${stats.total_features})
+
+${sortedFeatures.map(f => `
+- ${f.title} (${f.timeline?.implemented_at || f.implemented_at})
+  ${f.description}
+  Tags: ${f.tags?.join(', ') || 'none'}
+  Session: ${f.traceability?.session_id || f.session_id}
+  Archive: ${f.traceability?.archive_path || 'unknown'}
+  ${f.traceability?.commit_hash ? `Commit: ${f.traceability.commit_hash}` : ''}
+`).join('\n')}
+
+### Project Statistics
+- Total Features: ${stats.total_features}
+- Total Sessions: ${stats.total_sessions}
+- Last Updated: ${stats.last_updated}
+
+### Quick Access
+- View session details: /workflow:status
+- Archive query: jq '.archives[] | select(.session_id == "SESSION_ID")' .workflow/archives/manifest.json
+- Documentation: .workflow/docs/${projectData.project_name}/
+
+### Query Commands
+# Find by tag
+cat .workflow/project.json | jq '.features[] | select(.tags[] == "auth")'
+
+# View archive
+cat ${feature.traceability.archive_path}/IMPL_PLAN.md
+
+# List all tags
+cat .workflow/project.json | jq -r '.features[].tags[]' | sort -u
+```
+
+**Empty State**:
+```
+## Project: ${projectData.project_name}
+Initialized: ${projectData.initialized_at}
+
+No features completed yet.
+
+Complete your first workflow session to add features:
+1. /workflow:plan "feature description"
+2. /workflow:execute
+3. /workflow:session:complete
+```
+
+### Step 4: Show Recent Sessions (Optional)
+
+```bash
+# List 5 most recent archived sessions
+bash(ls -1t .workflow/archives/WFS-* 2>/dev/null | head -5 | xargs -I {} basename {})
+```
+
+**Output**:
+```
+### Recent Sessions
+- WFS-auth-system (archived)
+- WFS-payment-flow (archived)
+- WFS-user-dashboard (archived)
+
+Use /workflow:session:complete to archive current session.
+```
+
+## Workflow Session Mode (Default)
+
 ### Step 1: Find Active Session
 ```bash
-find .workflow/ -name ".active-*" -type f 2>/dev/null | head -1
+find .workflow/active/ -name "WFS-*" -type d 2>/dev/null | head -1
 ```
 
 ### Step 2: Load Session Data
 ```bash
-cat .workflow/WFS-session/workflow-session.json
+cat .workflow/active/WFS-session/workflow-session.json
 ```
 
 ### Step 3: Scan Task Files
 ```bash
-find .workflow/WFS-session/.task/ -name "*.json" -type f 2>/dev/null
+find .workflow/active/WFS-session/.task/ -name "*.json" -type f 2>/dev/null
 ```
 
 ### Step 4: Generate Task Status
 ```bash
-cat .workflow/WFS-session/.task/impl-1.json | jq -r '.status'
+cat .workflow/active/WFS-session/.task/impl-1.json | jq -r '.status'
 ```
 
 ### Step 5: Count Task Progress
 ```bash
-find .workflow/WFS-session/.task/ -name "*.json" -type f | wc -l
-find .workflow/WFS-session/.summaries/ -name "*.md" -type f 2>/dev/null | wc -l
+find .workflow/active/WFS-session/.task/ -name "*.json" -type f | wc -l
+find .workflow/active/WFS-session/.summaries/ -name "*.md" -type f 2>/dev/null | wc -l
 ```
 
 ### Step 6: Display Overview
@@ -58,62 +196,133 @@ find .workflow/WFS-session/.summaries/ -name "*.md" -type f 2>/dev/null | wc -l
 - [COMPLETED] impl-0: Setup completed
 ```
 
-## Simple Bash Commands
+## Dashboard Mode (HTML Board)
 
-### Basic Operations
-- **Find active session**: `find .workflow/ -name ".active-*" -type f`
-- **Read session info**: `cat .workflow/session/workflow-session.json`
-- **List tasks**: `find .workflow/session/.task/ -name "*.json" -type f`
-- **Check task status**: `cat task.json | jq -r '.status'`
-- **Count completed**: `find .summaries/ -name "*.md" -type f | wc -l`
-
-### Task Status Check
-- **pending**: Not started yet
-- **active**: Currently in progress
-- **completed**: Finished with summary
-- **blocked**: Waiting for dependencies
-
-### Validation Commands
+### Step 1: Check for --dashboard flag
 ```bash
-# Check session exists
-test -f .workflow/.active-* && echo "Session active"
-
-# Validate task files
-for f in .workflow/session/.task/*.json; do jq empty "$f" && echo "Valid: $f"; done
-
-# Check summaries match
-find .task/ -name "*.json" -type f | wc -l
-find .summaries/ -name "*.md" -type f 2>/dev/null | wc -l
+# If --dashboard flag present → Execute Dashboard Mode
 ```
 
-## Simple Output Format
+### Step 2: Collect Workflow Data
 
-### Default Overview
-```
-Session: WFS-user-auth
-Status: ACTIVE
-Progress: 5/12 tasks
+**Collect Active Sessions**:
+```bash
+# Find all active sessions
+find .workflow/active/ -name "WFS-*" -type d 2>/dev/null
 
-Current: impl-3 (Building API endpoints)
-Next: impl-4 (Adding authentication)
-Completed: impl-1, impl-2
+# For each active session, read metadata and tasks
+for session in $(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null); do
+  cat "$session/workflow-session.json"
+  find "$session/.task/" -name "*.json" -type f 2>/dev/null
+done
 ```
 
-### Task Details
-```
-Task: impl-1
-Title: Build authentication module
-Status: completed
-Agent: code-developer
-Created: 2025-09-15
-Completed: 2025-09-15
-Summary: .summaries/impl-1-summary.md
+**Collect Archived Sessions**:
+```bash
+# Find all archived sessions
+find .workflow/archives/ -name "WFS-*" -type d 2>/dev/null
+
+# Read manifest if exists
+cat .workflow/archives/manifest.json 2>/dev/null
+
+# For each archived session, read metadata
+for archive in $(find .workflow/archives/ -name "WFS-*" -type d 2>/dev/null); do
+  cat "$archive/workflow-session.json" 2>/dev/null
+  # Count completed tasks
+  find "$archive/.task/" -name "*.json" -type f 2>/dev/null | wc -l
+done
 ```
 
-### Validation Results
+### Step 3: Process and Structure Data
+
+**Build data structure for dashboard**:
+```javascript
+const dashboardData = {
+  activeSessions: [],
+  archivedSessions: [],
+  generatedAt: new Date().toISOString()
+};
+
+// Process active sessions
+for each active_session in active_sessions:
+  const sessionData = JSON.parse(Read(active_session/workflow-session.json));
+  const tasks = [];
+
+  // Load all tasks for this session
+  for each task_file in find(active_session/.task/*.json):
+    const taskData = JSON.parse(Read(task_file));
+    tasks.push({
+      task_id: taskData.task_id,
+      title: taskData.title,
+      status: taskData.status,
+      type: taskData.type
+    });
+
+  dashboardData.activeSessions.push({
+    session_id: sessionData.session_id,
+    project: sessionData.project,
+    status: sessionData.status,
+    created_at: sessionData.created_at || sessionData.initialized_at,
+    tasks: tasks
+  });
+
+// Process archived sessions
+for each archived_session in archived_sessions:
+  const sessionData = JSON.parse(Read(archived_session/workflow-session.json));
+  const taskCount = bash(find archived_session/.task/*.json | wc -l);
+
+  dashboardData.archivedSessions.push({
+    session_id: sessionData.session_id,
+    project: sessionData.project,
+    archived_at: sessionData.completed_at || sessionData.archived_at,
+    taskCount: parseInt(taskCount),
+    archive_path: archived_session
+  });
 ```
-Session file valid
-8 task files found
-3 summaries found
-5 tasks pending completion
+
+### Step 4: Generate HTML from Template
+
+**Load template and inject data**:
+```javascript
+// Read the HTML template
+const template = Read("~/.claude/templates/workflow-dashboard.html");
+
+// Prepare data for injection
+const dataJson = JSON.stringify(dashboardData, null, 2);
+
+// Replace placeholder with actual data
+const htmlContent = template.replace('{{WORKFLOW_DATA}}', dataJson);
+
+// Ensure .workflow directory exists
+bash(mkdir -p .workflow);
+```
+
+### Step 5: Write HTML File
+
+```bash
+# Write the generated HTML to .workflow/dashboard.html
+Write({
+  file_path: ".workflow/dashboard.html",
+  content: htmlContent
+})
+```
+
+### Step 6: Display Success Message
+
+```markdown
+Dashboard generated successfully!
+
+Location: .workflow/dashboard.html
+
+Open in browser:
+  file://$(pwd)/.workflow/dashboard.html
+
+Features:
+- 📊 Active sessions overview
+- 📦 Archived sessions history
+- 🔍 Search and filter
+- 📈 Progress tracking
+- 🎨 Dark/light theme
+
+Refresh data: Re-run /workflow:status --dashboard
 ```

.claude/commands/workflow/tdd-plan.md

@@ -70,7 +70,7 @@ TEST_FOCUS: [Test scenarios]
 
 **Parse Output**:
 - Extract: context-package.json path (store as `contextPath`)
-- Typical pattern: `.workflow/[sessionId]/.process/context-package.json`
+- Typical pattern: `.workflow/active/[sessionId]/.process/context-package.json`
 
 **Validation**:
 - Context package path extracted
@@ -91,7 +91,7 @@ TEST_FOCUS: [Test scenarios]
 - Related components and integration points
 - Test framework detection
 
-**Parse**: Extract testContextPath (`.workflow/[sessionId]/.process/test-context-package.json`)
+**Parse**: Extract testContextPath (`.workflow/active/[sessionId]/.process/test-context-package.json`)
 
 **Benefits**:
 - Makes TDD aware of existing environment
@@ -153,7 +153,7 @@ TEST_FOCUS: [Test scenarios]
 - Verify: CONFLICT_RESOLUTION.md file path (if executed)
 
 **Validation**:
-- File `.workflow/[sessionId]/.process/CONFLICT_RESOLUTION.md` exists (if executed)
+- File `.workflow/active/[sessionId]/.process/CONFLICT_RESOLUTION.md` exists (if executed)
 
 **Skip Behavior**:
 - If conflict_risk is "none" or "low", skip directly to Phase 5
@@ -296,9 +296,9 @@ Structure:
 [...]
 
 Plans generated:
-- Unified Implementation Plan: .workflow/[sessionId]/IMPL_PLAN.md
+- Unified Implementation Plan: .workflow/active/[sessionId]/IMPL_PLAN.md
   (includes TDD Implementation Tasks section with workflow_type: "tdd")
-- Task List: .workflow/[sessionId]/TODO_LIST.md
+- Task List: .workflow/active/[sessionId]/TODO_LIST.md
   (with internal TDD phase indicators)
 
 TDD Configuration:
@@ -417,110 +417,6 @@ Convert user input to TDD-structured format:
 - **Command failure**: Keep phase in_progress, report error
 - **TDD validation failure**: Report incomplete chains or wrong dependencies
 
-## TDD Workflow Enhancements
-
-### Overview
-The TDD workflow has been significantly enhanced by integrating best practices from both traditional `plan --agent` and `test-gen` workflows, creating a hybrid approach that bridges the gap between idealized TDD and real-world development complexity.
-
-### Key Improvements
-
-#### 1. Test Coverage Analysis (Phase 3)
-**Adopted from test-gen workflow**
-
-Before planning TDD tasks, the workflow now analyzes the existing codebase:
-- Detects existing test patterns and conventions
-- Identifies current test coverage
-- Discovers related components and integration points
-- Detects test framework automatically
-
-**Benefits**:
-- Context-aware TDD planning
-- Avoids duplicate test creation
-- Enables integration with existing tests
-- No longer assumes greenfield scenarios
-
-#### 2. Iterative Green Phase with Test-Fix Cycle
-**Adopted from test-gen workflow**
-
-IMPL (Green phase) tasks now include automatic test-fix cycle for resilient implementation:
-
-**Enhanced IMPL Task Flow**:
-```
-1. Write minimal implementation code
-2. Execute test suite
-3. IF tests pass → Complete task
-4. IF tests fail → Enter fix cycle:
-   a. Gemini diagnoses with bug-fix template
-   b. Apply fix (manual or Codex)
-   c. Retest
-   d. Repeat (max 3 iterations)
-5. IF max iterations → Auto-revert changes 🔄
-```
-
-**Benefits**:
-- Faster feedback within Green phase
-- Autonomous recovery from implementation errors
-- Systematic debugging with Gemini
-- Safe rollback prevents broken state
-
-#### 3. Agent-Driven Planning
-**From plan --agent workflow**
-
-Supports action-planning-agent for more autonomous TDD planning with:
-- MCP tool integration (code-index, exa)
-- Memory-first principles
-- Brainstorming artifact integration
-- Task merging over decomposition
-
-### Workflow Comparison
-
-| Aspect | Previous | Current (Optimized) |
-|--------|----------|---------------------|
-| **Phases** | 6 (with test coverage) | 7 (added concept verification) |
-| **Context** | Greenfield assumption | Existing codebase aware |
-| **Task Structure** | 1 feature = 3 tasks (TEST/IMPL/REFACTOR) | 1 feature = 1 task (internal TDD cycle) |
-| **Task Count** | 5 features = 15 tasks | 5 features = 5 tasks (70% reduction) |
-| **Green Phase** | Single implementation | Iterative with fix cycle |
-| **Failure Handling** | Manual intervention | Auto-diagnose + fix + revert |
-| **Test Analysis** | None | Deep coverage analysis |
-| **Feedback Loop** | Post-execution | During Green phase |
-| **Task Management** | High overhead (15 tasks) | Low overhead (5 tasks) |
-| **Execution Efficiency** | Frequent context switching | Continuous context per feature |
-
-### Migration Notes
-
-**Backward Compatibility**: Fully compatible
-- Existing TDD workflows continue to work
-- New features are additive, not breaking
-- Phase 3 can be skipped if test-context-gather not available
-
-**Session Structure**:
-```
-.workflow/WFS-xxx/
-├── IMPL_PLAN.md (unified plan with TDD Implementation Tasks section)
-├── TODO_LIST.md (with internal TDD phase indicators)
-├── .process/
-│   ├── context-package.json
-│   ├── test-context-package.json
-│   ├── ANALYSIS_RESULTS.md (enhanced with TDD breakdown)
-│   └── green-fix-iteration-*.md (fix logs from Green phase cycles)
-└── .task/
-    ├── IMPL-1.json (Complete TDD task: Red-Green-Refactor internally)
-    ├── IMPL-2.json (Complete TDD task)
-    ├── IMPL-3.json (Complex feature container, if needed)
-    ├── IMPL-3.1.json (Complex feature subtask, if needed)
-    └── IMPL-3.2.json (Complex feature subtask, if needed)
-```
-
-**File Count Comparison**:
-- **Old structure**: 5 features = 15 task files (TEST/IMPL/REFACTOR × 5)
-- **New structure**: 5 features = 5 task files (IMPL-N × 5)
-- **Complex features**: Add container + subtasks only when necessary
-
-**Configuration Options** (in IMPL tasks):
-- `meta.max_iterations`: Fix attempts (default: 3)
-- `meta.use_codex`: Auto-fix mode (default: false)
-
 ## Related Commands
 
 **Prerequisite Commands**:

.claude/commands/workflow/tdd-verify.md

@@ -28,7 +28,7 @@ allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Bash(gemini:*)
 sessionId = argument
 
 # Else auto-detect active session
-find .workflow/ -name '.active-*' | head -1 | sed 's/.*active-//'
+find .workflow/active/ -name "WFS-*" -type d | head -1 | sed 's/.*\///'
 ```
 
 **Extract**: sessionId
@@ -44,18 +44,18 @@ find .workflow/ -name '.active-*' | head -1 | sed 's/.*active-//'
 
 ```bash
 # Load all task JSONs
-find .workflow/{sessionId}/.task/ -name '*.json'
+find .workflow/active/{sessionId}/.task/ -name '*.json'
 
 # Extract task IDs
-find .workflow/{sessionId}/.task/ -name '*.json' -exec jq -r '.id' {} \;
+find .workflow/active/{sessionId}/.task/ -name '*.json' -exec jq -r '.id' {} \;
 
 # Check dependencies
-find .workflow/{sessionId}/.task/ -name 'IMPL-*.json' -exec jq -r '.context.depends_on[]?' {} \;
-find .workflow/{sessionId}/.task/ -name 'REFACTOR-*.json' -exec jq -r '.context.depends_on[]?' {} \;
+find .workflow/active/{sessionId}/.task/ -name 'IMPL-*.json' -exec jq -r '.context.depends_on[]?' {} \;
+find .workflow/active/{sessionId}/.task/ -name 'REFACTOR-*.json' -exec jq -r '.context.depends_on[]?' {} \;
 
 # Check meta fields
-find .workflow/{sessionId}/.task/ -name '*.json' -exec jq -r '.meta.tdd_phase' {} \;
-find .workflow/{sessionId}/.task/ -name '*.json' -exec jq -r '.meta.agent' {} \;
+find .workflow/active/{sessionId}/.task/ -name '*.json' -exec jq -r '.meta.tdd_phase' {} \;
+find .workflow/active/{sessionId}/.task/ -name '*.json' -exec jq -r '.meta.agent' {} \;
 ```
 
 **Validation**:
@@ -82,9 +82,9 @@ find .workflow/{sessionId}/.task/ -name '*.json' -exec jq -r '.meta.agent' {} \;
 - Compliance score
 
 **Validation**:
-- `.workflow/{sessionId}/.process/test-results.json` exists
-- `.workflow/{sessionId}/.process/coverage-report.json` exists
-- `.workflow/{sessionId}/.process/tdd-cycle-report.md` exists
+- `.workflow/active/{sessionId}/.process/test-results.json` exists
+- `.workflow/active/{sessionId}/.process/coverage-report.json` exists
+- `.workflow/active/{sessionId}/.process/tdd-cycle-report.md` exists
 
 **TodoWrite**: Mark phase 3 completed, phase 4 in_progress
 
@@ -97,7 +97,7 @@ find .workflow/{sessionId}/.task/ -name '*.json' -exec jq -r '.meta.agent' {} \;
 cd project-root && gemini -p "
 PURPOSE: Generate TDD compliance report
 TASK: Analyze TDD workflow execution and generate quality report
-CONTEXT: @{.workflow/{sessionId}/.task/*.json,.workflow/{sessionId}/.summaries/*,.workflow/{sessionId}/.process/tdd-cycle-report.md}
+CONTEXT: @{.workflow/active/{sessionId}/.task/*.json,.workflow/active/{sessionId}/.summaries/*,.workflow/active/{sessionId}/.process/tdd-cycle-report.md}
 EXPECTED:
 - TDD compliance score (0-100)
 - Chain completeness verification
@@ -106,7 +106,7 @@ EXPECTED:
 - Red-Green-Refactor cycle validation
 - Best practices adherence assessment
 RULES: Focus on TDD best practices and workflow adherence. Be specific about violations and improvements.
-" > .workflow/{sessionId}/TDD_COMPLIANCE_REPORT.md
+" > .workflow/active/{sessionId}/TDD_COMPLIANCE_REPORT.md
 ```
 
 **Output**: TDD_COMPLIANCE_REPORT.md
@@ -134,7 +134,7 @@ Function Coverage: {percentage}%
 
 ## Compliance Score: {score}/100
 
-Detailed report: .workflow/{sessionId}/TDD_COMPLIANCE_REPORT.md
+Detailed report: .workflow/active/{sessionId}/TDD_COMPLIANCE_REPORT.md
 
 Recommendations:
 - Complete missing REFACTOR-3.1 task
@@ -168,7 +168,7 @@ TodoWrite({todos: [
 
 ### Chain Validation Algorithm
 ```
-1. Load all task JSONs from .workflow/{sessionId}/.task/
+1. Load all task JSONs from .workflow/active/{sessionId}/.task/
 2. Extract task IDs and group by feature number
 3. For each feature:
    - Check TEST-N.M exists
@@ -202,7 +202,7 @@ Final Score: Max(0, Base Score - Deductions)
 
 ## Output Files
 ```
-.workflow/{session-id}/
+.workflow/active/{session-id}/
 ├── TDD_COMPLIANCE_REPORT.md     # Comprehensive compliance report ⭐
 └── .process/
     ├── test-results.json         # From tdd-coverage-analysis
@@ -215,8 +215,8 @@ Final Score: Max(0, Base Score - Deductions)
 ### Session Discovery Errors
 | Error | Cause | Resolution |
 |-------|-------|------------|
-| No active session | No .active-* file | Provide session-id explicitly |
-| Multiple active sessions | Multiple .active-* files | Provide session-id explicitly |
+| No active session | No WFS-* directories | Provide session-id explicitly |
+| Multiple active sessions | Multiple WFS-* directories | Provide session-id explicitly |
 | Session not found | Invalid session-id | Check available sessions |
 
 ### Validation Errors

.claude/commands/workflow/test-cycle-execute.md

@@ -209,13 +209,13 @@ Iteration N (managed by test-cycle-execute orchestrator):
     "pre_analysis": [
       {
         "step": "load_failure_context",
-        "command": "Read(.workflow/{session}/.process/iteration-{N-1}-failures.json)",
+        "command": "Read(.workflow/session/{session}/.process/iteration-{N-1}-failures.json)",
         "output_to": "previous_failures",
         "on_error": "skip_optional"
       },
       {
         "step": "load_fix_strategy",
-        "command": "Read(.workflow/{session}/.process/iteration-{N}-strategy.md)",
+        "command": "Read(.workflow/session/{session}/.process/iteration-{N}-strategy.md)",
         "output_to": "fix_strategy",
         "on_error": "fail"
       }
@@ -543,7 +543,7 @@ This package is passed to agents via the Task tool's prompt context.
     "coverage_target": 80
   },
   "session": {
-    "workflow_dir": ".workflow/WFS-test-{session}/",
+    "workflow_dir": ".workflow/active/WFS-test-{session}/",
     "iteration_state_file": ".process/iteration-state.json",
     "test_results_file": ".process/test-results.json",
     "fix_history_file": ".process/fix-history.json"
@@ -555,7 +555,7 @@ This package is passed to agents via the Task tool's prompt context.
 
 ### Test-Fix Session Files
 ```
-.workflow/WFS-test-{session}/
+.workflow/active/WFS-test-{session}/
 ├── workflow-session.json          # Session metadata with workflow_type
 ├── IMPL_PLAN.md                   # Test plan
 ├── TODO_LIST.md                   # Progress tracking
@@ -704,7 +704,7 @@ Task(subagent_type="{meta.agent}",
 #### Resume from Interruption
 ```bash
 # Load iteration state
-iteration_state=$(cat .workflow/{session}/.process/iteration-state.json)
+iteration_state=$(cat .workflow/session/{session}/.process/iteration-state.json)
 current_iteration=$(jq -r '.current_iteration' <<< "$iteration_state")
 
 # Determine resume point
@@ -723,7 +723,7 @@ fi
 git revert HEAD
 
 # Remove failed fix task
-rm .workflow/{session}/.task/IMPL-fix-{N}.json
+rm .workflow/session/{session}/.task/IMPL-fix-{N}.json
 
 # Restore iteration state
 jq '.current_iteration -= 1' iteration-state.json > temp.json

.claude/commands/workflow/test-fix-gen.md

@@ -513,7 +513,7 @@ If quality gate fails:
 
 ### Output Files Structure
 
-Created in `.workflow/WFS-test-[session]/`:
+Created in `.workflow/active/WFS-test-[session]/`:
 
 ```
 WFS-test-[session]/
@@ -579,7 +579,7 @@ Test-Fix-Gen Workflow Orchestrator (Dual-Mode Support)
    └─ Command ends, control returns to user
 
 Artifacts Created:
-├── .workflow/WFS-test-[session]/
+├── .workflow/active/WFS-test-[session]/
 │   ├── workflow-session.json
 │   ├── IMPL_PLAN.md
 │   ├── TODO_LIST.md

.claude/commands/workflow/test-gen.md

@@ -397,7 +397,7 @@ Test-Gen Workflow Orchestrator
    └─ Command ends, control returns to user
 
 Artifacts Created:
-├── .workflow/WFS-test-[session]/
+├── .workflow/active/WFS-test-[session]/
 │   ├── workflow-session.json
 │   ├── IMPL_PLAN.md
 │   ├── TODO_LIST.md
@@ -444,7 +444,7 @@ See `/workflow:tools:test-task-generate` for complete task JSON schemas.
 
 ## Output Files
 
-Created in `.workflow/WFS-test-[session]/`:
+Created in `.workflow/active/WFS-test-[session]/`:
 - `workflow-session.json` - Session metadata
 - `.process/test-context-package.json` - Coverage analysis
 - `.process/TEST_ANALYSIS_RESULTS.md` - Test requirements

.claude/commands/workflow/tools/conflict-resolution.md

@@ -3,14 +3,19 @@ name: conflict-resolution
 description: Detect and resolve conflicts between plan and existing codebase using CLI-powered analysis with Gemini/Qwen
 argument-hint: "--session WFS-session-id --context path/to/context-package.json"
 examples:
-  - /workflow:tools:conflict-resolution --session WFS-auth --context .workflow/WFS-auth/.process/context-package.json
-  - /workflow:tools:conflict-resolution --session WFS-payment --context .workflow/WFS-payment/.process/context-package.json
+  - /workflow:tools:conflict-resolution --session WFS-auth --context .workflow/active/WFS-auth/.process/context-package.json
+  - /workflow:tools:conflict-resolution --session WFS-payment --context .workflow/active/WFS-payment/.process/context-package.json
 ---
 
 # Conflict Resolution Command
 
 ## Purpose
-Analyzes conflicts between implementation plans and existing codebase, generating multiple resolution strategies.
+Analyzes conflicts between implementation plans and existing codebase, **including module scenario uniqueness detection**, generating multiple resolution strategies with **iterative clarification until boundaries are clear**.
+
+**Key Enhancements**:
+- **Scenario Uniqueness Detection**: Agent searches all existing modules to identify functional overlaps
+- **Iterative Clarification Loop**: Unlimited questions per conflict until scenario boundaries are uniquely defined (max 10 rounds)
+- **Dynamic Re-analysis**: Agent updates strategies based on user clarifications
 
 **Scope**: Detection and strategy generation only - NO code modification or task creation.
 
@@ -21,11 +26,14 @@ Analyzes conflicts between implementation plans and existing codebase, generatin
 | Responsibility | Description |
 |---------------|-------------|
 | **Detect Conflicts** | Analyze plan vs existing code inconsistencies |
+| **Scenario Uniqueness** | **NEW**: Search and compare new modules with existing modules for functional overlaps |
 | **Generate Strategies** | Provide 2-4 resolution options per conflict |
+| **Iterative Clarification** | **NEW**: Ask unlimited questions until scenario boundaries are clear and unique |
+| **Agent Re-analysis** | **NEW**: Dynamically update strategies based on user clarifications |
 | **CLI Analysis** | Use Gemini/Qwen (Claude fallback) |
-| **User Decision** | Present options, never auto-apply |
+| **User Decision** | Present options ONE BY ONE, never auto-apply |
 | **Direct Text Output** | Output questions via text directly, NEVER use bash echo/printf |
-| **Single Output** | `CONFLICT_RESOLUTION.md` with findings |
+| **Structured Data** | JSON output for programmatic processing, NO file generation |
 
 ## Conflict Categories
 
@@ -49,6 +57,13 @@ Analyzes conflicts between implementation plans and existing codebase, generatin
 - Setup conflicts
 - Breaking updates
 
+### 5. Module Scenario Overlap
+- **NEW**: Functional overlap between new and existing modules
+- Scenario boundary ambiguity
+- Duplicate responsibility detection
+- Module merge/split decisions
+- **Requires iterative clarification until uniqueness confirmed**
+
 ## Execution Flow
 
 ### Phase 1: Validation
@@ -73,23 +88,31 @@ Task(subagent_type="cli-execution-agent", prompt=`
 
   ### 1. Load Context
   - Read existing files from conflict_detection.existing_files
-  - Load plan from .workflow/{session_id}/.process/context-package.json
+  - Load plan from .workflow/active/{session_id}/.process/context-package.json
   - Extract role analyses and requirements
 
-  ### 2. Execute CLI Analysis
+  ### 2. Execute CLI Analysis (Enhanced with Scenario Uniqueness Detection)
 
   Primary (Gemini):
   cd {project_root} && gemini -p "
-  PURPOSE: Detect conflicts between plan and codebase
+  PURPOSE: Detect conflicts between plan and codebase, including module scenario overlaps
   TASK:
   • Compare architectures
   • Identify breaking API changes
   • Detect data model incompatibilities
   • Assess dependency conflicts
+  • **NEW: Analyze module scenario uniqueness**
+    - Extract new module functionality from plan
+    - Search all existing modules with similar functionality
+    - Compare scenario coverage and identify overlaps
+    - Generate clarification questions for boundary definition
   MODE: analysis
-  CONTEXT: @{existing_files} @.workflow/{session_id}/**/*
-  EXPECTED: Conflict list with severity ratings
-  RULES: Focus on breaking changes and migration needs
+  CONTEXT: @**/*.ts @**/*.js @**/*.tsx @**/*.jsx @.workflow/active/{session_id}/**/*
+  EXPECTED: Conflict list with severity ratings, including ModuleOverlap conflicts with:
+    - Existing module list with scenarios
+    - Overlap analysis matrix
+    - Targeted clarification questions
+  RULES: $(cat ~/.claude/workflows/cli-templates/prompts/analysis/02-analyze-code-patterns.txt) | Focus on breaking changes, migration needs, and functional overlaps | analysis=READ-ONLY
   "
 
   Fallback: Qwen (same prompt) → Claude (manual analysis)
@@ -98,9 +121,11 @@ Task(subagent_type="cli-execution-agent", prompt=`
 
   Template per conflict:
   - Severity: Critical/High/Medium
-  - Category: Architecture/API/Data/Dependency
+  - Category: Architecture/API/Data/Dependency/ModuleOverlap
   - Affected files + impact
+  - **For ModuleOverlap**: Include overlap_analysis with existing modules and scenarios
   - Options with pros/cons, effort, risk
+  - **For ModuleOverlap strategies**: Add clarification_needed questions for boundary definition
   - Recommended strategy + rationale
 
   ### 4. Return Structured Conflict Data
@@ -116,10 +141,10 @@ Task(subagent_type="cli-execution-agent", prompt=`
         "id": "CON-001",
         "brief": "一行中文冲突摘要",
         "severity": "Critical|High|Medium",
-        "category": "Architecture|API|Data|Dependency",
+        "category": "Architecture|API|Data|Dependency|ModuleOverlap",
         "affected_files": [
-          ".workflow/{session}/.brainstorm/guidance-specification.md",
-          ".workflow/{session}/.brainstorm/system-architect/analysis.md"
+          ".workflow/active/{session}/.brainstorm/guidance-specification.md",
+          ".workflow/active/{session}/.brainstorm/system-architect/analysis.md"
         ],
         "description": "详细描述冲突 - 什么不兼容",
         "impact": {
@@ -128,6 +153,23 @@ Task(subagent_type="cli-execution-agent", prompt=`
           "migration_required": true|false,
           "estimated_effort": "人天估计"
         },
+        "overlap_analysis": {
+          "// NOTE": "仅当 category=ModuleOverlap 时需要此字段",
+          "new_module": {
+            "name": "新模块名称",
+            "scenarios": ["场景1", "场景2", "场景3"],
+            "responsibilities": "职责描述"
+          },
+          "existing_modules": [
+            {
+              "file": "src/existing/module.ts",
+              "name": "现有模块名称",
+              "scenarios": ["场景A", "场景B"],
+              "overlap_scenarios": ["重叠场景1", "重叠场景2"],
+              "responsibilities": "现有模块职责"
+            }
+          ]
+        },
         "strategies": [
           {
             "name": "策略名称（中文）",
@@ -137,9 +179,15 @@ Task(subagent_type="cli-execution-agent", prompt=`
             "effort": "时间估计",
             "pros": ["优点1", "优点2"],
             "cons": ["缺点1", "缺点2"],
+            "clarification_needed": [
+              "// NOTE: 仅当需要用户进一步澄清时需要此字段（尤其是 ModuleOverlap）",
+              "新模块的核心职责边界是什么？",
+              "如何与现有模块 X 协作？",
+              "哪些场景应该由新模块处理？"
+            ],
             "modifications": [
               {
-                "file": ".workflow/{session}/.brainstorm/guidance-specification.md",
+                "file": ".workflow/active/{session}/.brainstorm/guidance-specification.md",
                 "section": "## 2. System Architect Decisions",
                 "change_type": "update",
                 "old_content": "原始内容片段（用于定位）",
@@ -147,7 +195,7 @@ Task(subagent_type="cli-execution-agent", prompt=`
                 "rationale": "为什么这样改"
               },
               {
-                "file": ".workflow/{session}/.brainstorm/system-architect/analysis.md",
+                "file": ".workflow/active/{session}/.brainstorm/system-architect/analysis.md",
                 "section": "## Design Decisions",
                 "change_type": "update",
                 "old_content": "原始内容片段",
@@ -204,155 +252,251 @@ Task(subagent_type="cli-execution-agent", prompt=`
 `)
 ```
 
-**Agent Internal Flow**:
+**Agent Internal Flow** (Enhanced):
 ```
 1. Load context package
 2. Check conflict_risk (exit if none/low)
 3. Read existing files + plan artifacts
-4. Run CLI analysis (Gemini→Qwen→Claude)
-5. Parse conflict findings
-6. Generate 2-4 strategies per conflict with modifications
+4. Run CLI analysis (Gemini→Qwen→Claude) with enhanced tasks:
+   - Standard conflict detection (Architecture/API/Data/Dependency)
+   - **NEW: Module scenario uniqueness detection**
+     * Extract new module functionality from plan
+     * Search all existing modules with similar keywords/functionality
+     * Compare scenario coverage and responsibilities
+     * Identify functional overlaps and boundary ambiguities
+     * Generate ModuleOverlap conflicts with overlap_analysis
+5. Parse conflict findings (including ModuleOverlap category)
+6. Generate 2-4 strategies per conflict:
+   - Include modifications for each strategy
+   - **For ModuleOverlap**: Add clarification_needed questions for boundary definition
 7. Return JSON to stdout (NOT file write)
 8. Return execution log path
 ```
 
-### Phase 3: User Confirmation via Text Interaction
+### Phase 3: Iterative User Interaction with Clarification Loop
 
-**Command parses agent JSON output and presents conflicts to user via text**:
+**Execution Flow**:
+```
+FOR each conflict (逐个处理，无数量限制):
+  clarified = false
+  round = 0
+  userClarifications = []
+
+  WHILE (!clarified && round < 10):
+    round++
+
+    // 1. Display conflict (包含所有关键字段)
+    - category, id, brief, severity, description
+    - IF ModuleOverlap: 展示 overlap_analysis
+      * new_module: {name, scenarios, responsibilities}
+      * existing_modules[]: {file, name, scenarios, overlap_scenarios, responsibilities}
+
+    // 2. Display strategies (2-4个策略 + 自定义选项)
+    - FOR each strategy: {name, approach, complexity, risk, effort, pros, cons}
+      * IF clarification_needed: 展示待澄清问题列表
+    - 自定义选项: {suggestions: modification_suggestions[]}
+
+    // 3. User selects strategy
+    userChoice = readInput()
+
+    IF userChoice == "自定义":
+      customConflicts.push({id, brief, category, suggestions, overlap_analysis})
+      clarified = true
+      BREAK
+
+    selectedStrategy = strategies[userChoice]
+
+    // 4. Clarification loop
+    IF selectedStrategy.clarification_needed.length > 0:
+      // 收集澄清答案
+      FOR each question:
+        answer = readInput()
+        userClarifications.push({question, answer})
+
+      // Agent 重新分析
+      reanalysisResult = Task(cli-execution-agent, prompt={
+        冲突信息: {id, brief, category, 策略}
+        用户澄清: userClarifications[]
+        场景分析: overlap_analysis (if ModuleOverlap)
+
+        输出: {
+          uniqueness_confirmed: bool,
+          rationale: string,
+          updated_strategy: {name, approach, complexity, risk, effort, modifications[]},
+          remaining_questions: [] (如果仍有歧义)
+        }
+      })
+
+      IF reanalysisResult.uniqueness_confirmed:
+        selectedStrategy = updated_strategy
+        selectedStrategy.clarifications = userClarifications
+        clarified = true
+      ELSE:
+        // 更新澄清问题，继续下一轮
+        selectedStrategy.clarification_needed = remaining_questions
+    ELSE:
+      clarified = true
+
+    resolvedConflicts.push({conflict, strategy: selectedStrategy})
+  END WHILE
+END FOR
+
+// Build output
+selectedStrategies = resolvedConflicts.map(r => ({
+  conflict_id, strategy, clarifications[]
+}))
+```
+
+**Key Data Structures**:
 
 ```javascript
-// 1. Parse agent JSON output
-const conflictData = JSON.parse(agentOutput);
-const conflicts = conflictData.conflicts; // No 4-conflict limit
-
-// 2. Format conflicts as text output (max 10 per round)
-const batchSize = 10;
-const batches = chunkArray(conflicts, batchSize);
-
-for (const [batchIdx, batch] of batches.entries()) {
-  const totalBatches = batches.length;
-
-  // Output batch header
-  console.log(`===== 冲突解决 (第 ${batchIdx + 1}/${totalBatches} 轮) =====\n`);
-
-  // Output each conflict in batch
-  batch.forEach((conflict, idx) => {
-    const questionNum = batchIdx * batchSize + idx + 1;
-    console.log(`【问题${questionNum} - ${conflict.category}】${conflict.id}: ${conflict.brief}`);
-
-    conflict.strategies.forEach((strategy, sIdx) => {
-      const optionLetter = String.fromCharCode(97 + sIdx); // a, b, c, ...
-      console.log(`${optionLetter}) ${strategy.name}`);
-      console.log(`   说明：${strategy.approach}`);
-      console.log(`   复杂度: ${strategy.complexity} | 风险: ${strategy.risk} | 工作量: ${strategy.effort}`);
-    });
-
-    // Add custom option
-    const customLetter = String.fromCharCode(97 + conflict.strategies.length);
-    console.log(`${customLetter}) 自定义修改`);
-    console.log(`   说明：根据修改建议自行处理，不应用预设策略`);
-
-    // Show modification suggestions
-    if (conflict.modification_suggestions && conflict.modification_suggestions.length > 0) {
-      console.log(`   修改建议：`);
-      conflict.modification_suggestions.forEach(suggestion => {
-        console.log(`   - ${suggestion}`);
-      });
-    }
-    console.log();
-  });
-
-  console.log(`请回答 (格式: 1a 2b 3c...)：`);
-
-  // Wait for user input
-  const userInput = await readUserInput();
-
-  // Parse answers
-  const answers = parseUserAnswers(userInput, batch);
+// Custom conflict tracking
+customConflicts[] = {
+  id, brief, category,
+  suggestions: modification_suggestions[],
+  overlap_analysis: { new_module{}, existing_modules[] }  // ModuleOverlap only
 }
 
-// 3. Build selected strategies (exclude custom selections)
-const selectedStrategies = answers.filter(a => !a.isCustom).map(a => a.strategy);
-const customConflicts = answers.filter(a => a.isCustom).map(a => ({
-  id: a.conflict.id,
-  brief: a.conflict.brief,
-  suggestions: a.conflict.modification_suggestions
-}));
+// Agent re-analysis prompt output
+{
+  uniqueness_confirmed: bool,
+  rationale: string,
+  updated_strategy: {
+    name, approach, complexity, risk, effort,
+    modifications: [{file, section, change_type, old_content, new_content, rationale}]
+  },
+  remaining_questions: string[]
+}
 ```
 
-**Text Output Example**:
+**Text Output Example** (展示关键字段):
+
 ```markdown
-===== 冲突解决 (第 1/1 轮) =====
+============================================================
+冲突 1/3 - 第 1 轮
+============================================================
+【ModuleOverlap】CON-001: 新增用户认证服务与现有模块功能重叠
+严重程度: High | 描述: 计划中的 UserAuthService 与现有 AuthManager 场景重叠
 
-【问题1 - Architecture】CON-001: 现有认证系统与计划不兼容
-a) 渐进式迁移
-   说明：保留现有系统，逐步迁移到新方案
-   复杂度: Medium | 风险: Low | 工作量: 3-5天
-b) 完全重写
-   说明：废弃旧系统，从零实现新认证
-   复杂度: High | 风险: Medium | 工作量: 7-10天
-c) 自定义修改
-   说明：根据修改建议自行处理，不应用预设策略
-   修改建议：
-   - 评估现有认证系统的兼容性，考虑是否可以通过适配器模式桥接
-   - 检查JWT token格式和验证逻辑是否需要调整
-   - 确保用户会话管理与新架构保持一致
+--- 场景重叠分析 ---
+新模块: UserAuthService | 场景: 登录, Token验证, 权限, MFA
+现有模块: AuthManager (src/auth/AuthManager.ts) | 重叠: 登录, Token验证
 
-【问题2 - Data】CON-002: 数据库 schema 冲突
-a) 添加迁移脚本
-   说明：创建数据库迁移脚本处理 schema 变更
-   复杂度: Low | 风险: Low | 工作量: 1-2天
-b) 自定义修改
-   说明：根据修改建议自行处理，不应用预设策略
-   修改建议：
-   - 检查现有表结构是否支持新增字段，避免破坏性变更
-   - 考虑使用数据库版本控制工具（如Flyway或Liquibase）
-   - 准备数据迁移和回滚策略
+--- 解决策略 ---
+1) 合并 (Low复杂度 | Low风险 | 2-3天)
+   ⚠️ 需澄清: AuthManager是否能承担MFA？
 
-请回答 (格式: 1a 2b)：
+2) 拆分边界 (Medium复杂度 | Medium风险 | 4-5天)
+   ⚠️ 需澄清: 基础/高级认证边界? Token验证归谁?
+
+3) 自定义修改
+   建议: 评估扩展性; 策略模式分离; 定义接口边界
+
+请选择 (1-3): > 2
+
+--- 澄清问答 (第1轮) ---
+Q: 基础/高级认证边界?
+A: 基础=密码登录+token验证, 高级=MFA+OAuth+SSO
+
+Q: Token验证归谁?
+A: 统一由 AuthManager 负责
+
+🔄 重新分析...
+✅ 唯一性已确认 | 理由: 边界清晰 - AuthManager(基础+token), UserAuthService(MFA+OAuth+SSO)
+
+============================================================
+冲突 2/3 - 第 1 轮 [下一个冲突]
+============================================================
 ```
 
-**User Input Examples**:
-- `1a 2a` → Conflict 1: 渐进式迁移, Conflict 2: 添加迁移脚本
-- `1b 2b` → Conflict 1: 完全重写, Conflict 2: 自定义修改
-- `1c 2c` → Both choose custom modification (user handles manually with suggestions)
+**Loop Characteristics**: 逐个处理 | 无限轮次(max 10) | 动态问题生成 | Agent重新分析判断唯一性 | ModuleOverlap场景边界澄清
 
 ### Phase 4: Apply Modifications
 
 ```javascript
-// 1. Extract modifications from selected strategies
+// 1. Extract modifications from resolved strategies
 const modifications = [];
-selectedStrategies.forEach(strategy => {
-  if (strategy !== "skip") {
-    modifications.push(...strategy.modifications);
+selectedStrategies.forEach(item => {
+  if (item.strategy && item.strategy.modifications) {
+    modifications.push(...item.strategy.modifications.map(mod => ({
+      ...mod,
+      conflict_id: item.conflict_id,
+      clarifications: item.clarifications
+    })));
   }
 });
 
+console.log(`\n正在应用 ${modifications.length} 个修改...`);
+
 // 2. Apply each modification using Edit tool
-modifications.forEach(mod => {
-  if (mod.change_type === "update") {
-    Edit({
-      file_path: mod.file,
-      old_string: mod.old_content,
-      new_string: mod.new_content
-    });
+const appliedModifications = [];
+const failedModifications = [];
+
+modifications.forEach((mod, idx) => {
+  try {
+    console.log(`[${idx + 1}/${modifications.length}] 修改 ${mod.file}...`);
+
+    if (mod.change_type === "update") {
+      Edit({
+        file_path: mod.file,
+        old_string: mod.old_content,
+        new_string: mod.new_content
+      });
+    } else if (mod.change_type === "add") {
+      // Handle addition - append or insert based on section
+      const fileContent = Read(mod.file);
+      const updated = insertContentAfterSection(fileContent, mod.section, mod.new_content);
+      Write(mod.file, updated);
+    } else if (mod.change_type === "remove") {
+      Edit({
+        file_path: mod.file,
+        old_string: mod.old_content,
+        new_string: ""
+      });
+    }
+
+    appliedModifications.push(mod);
+    console.log(`  ✓ 成功`);
+  } catch (error) {
+    console.log(`  ✗ 失败: ${error.message}`);
+    failedModifications.push({ ...mod, error: error.message });
   }
-  // Handle "add" and "remove" similarly
 });
 
-// 3. Update context-package.json
+// 3. Update context-package.json with resolution details
 const contextPackage = JSON.parse(Read(contextPath));
 contextPackage.conflict_detection.conflict_risk = "resolved";
-contextPackage.conflict_detection.resolved_conflicts = conflicts.map(c => c.id);
+contextPackage.conflict_detection.resolved_conflicts = selectedStrategies.map(s => ({
+  conflict_id: s.conflict_id,
+  strategy_name: s.strategy.name,
+  clarifications: s.clarifications
+}));
+contextPackage.conflict_detection.custom_conflicts = customConflicts.map(c => c.id);
 contextPackage.conflict_detection.resolved_at = new Date().toISOString();
 Write(contextPath, JSON.stringify(contextPackage, null, 2));
 
-// 4. Output custom conflict summary (if any)
+// 4. Output custom conflict summary with overlap analysis (if any)
 if (customConflicts.length > 0) {
-  console.log("\n===== 需要自定义处理的冲突 =====\n");
+  console.log(`\n${'='.repeat(60)}`);
+  console.log(`需要自定义处理的冲突 (${customConflicts.length})`);
+  console.log(`${'='.repeat(60)}\n`);
+
   customConflicts.forEach(conflict => {
-    console.log(`【${conflict.id}】${conflict.brief}`);
-    console.log("修改建议：");
+    console.log(`【${conflict.category}】${conflict.id}: ${conflict.brief}`);
+
+    // Show overlap analysis for ModuleOverlap conflicts
+    if (conflict.category === 'ModuleOverlap' && conflict.overlap_analysis) {
+      console.log(`\n场景重叠信息:`);
+      console.log(`  新模块: ${conflict.overlap_analysis.new_module.name}`);
+      console.log(`  场景: ${conflict.overlap_analysis.new_module.scenarios.join(', ')}`);
+      console.log(`\n  与以下模块重叠:`);
+      conflict.overlap_analysis.existing_modules.forEach(mod => {
+        console.log(`    - ${mod.name} (${mod.file})`);
+        console.log(`      重叠场景: ${mod.overlap_scenarios.join(', ')}`);
+      });
+    }
+
+    console.log(`\n修改建议:`);
     conflict.suggestions.forEach(suggestion => {
       console.log(`  - ${suggestion}`);
     });
@@ -360,25 +504,43 @@ if (customConflicts.length > 0) {
   });
 }
 
-// 5. Return summary
+// 5. Output failure summary (if any)
+if (failedModifications.length > 0) {
+  console.log(`\n⚠️ 部分修改失败 (${failedModifications.length}):`);
+  failedModifications.forEach(mod => {
+    console.log(`  - ${mod.file}: ${mod.error}`);
+  });
+}
+
+// 6. Return summary
 return {
-  resolved: modifications.length,
-  custom: customConflicts.length,
-  modified_files: [...new Set(modifications.map(m => m.file))],
-  custom_conflicts: customConflicts
+  total_conflicts: conflicts.length,
+  resolved_with_strategy: selectedStrategies.length,
+  custom_handling: customConflicts.length,
+  modifications_applied: appliedModifications.length,
+  modifications_failed: failedModifications.length,
+  modified_files: [...new Set(appliedModifications.map(m => m.file))],
+  custom_conflicts: customConflicts,
+  clarification_records: selectedStrategies.filter(s => s.clarifications.length > 0)
 };
 ```
 
 **Validation**:
 ```
-✓ Agent returns valid JSON structure
-✓ Text output displays all conflicts (max 10 per round)
-✓ User selections captured correctly
+✓ Agent returns valid JSON structure with ModuleOverlap conflicts
+✓ Conflicts processed ONE BY ONE (not in batches)
+✓ ModuleOverlap conflicts include overlap_analysis field
+✓ Strategies with clarification_needed display questions
+✓ User selections captured correctly per conflict
+✓ Clarification loop continues until uniqueness confirmed
+✓ Agent re-analysis returns uniqueness_confirmed and updated_strategy
+✓ Maximum 10 rounds per conflict safety limit enforced
 ✓ Edit tool successfully applies modifications
 ✓ guidance-specification.md updated
 ✓ Role analyses (*.md) updated
-✓ context-package.json marked as resolved
-✓ Agent log saved to .workflow/{session_id}/.chat/
+✓ context-package.json marked as resolved with clarification records
+✓ Custom conflicts display overlap_analysis for manual handling
+✓ Agent log saved to .workflow/active/{session_id}/.chat/
 ```
 
 ## Output Format: Agent JSON Response
@@ -435,31 +597,45 @@ If Edit tool fails mid-application:
 
 **Output**:
 - Modified files:
-  - `.workflow/{session_id}/.brainstorm/guidance-specification.md`
-  - `.workflow/{session_id}/.brainstorm/{role}/analysis.md`
-  - `.workflow/{session_id}/.process/context-package.json` (conflict_risk → resolved)
+  - `.workflow/active/{session_id}/.brainstorm/guidance-specification.md`
+  - `.workflow/active/{session_id}/.brainstorm/{role}/analysis.md`
+  - `.workflow/active/{session_id}/.process/context-package.json` (conflict_risk → resolved)
 - NO report file generation
 
 **User Interaction**:
-- Text-based strategy selection (max 10 conflicts per round)
+- **Iterative conflict processing**: One conflict at a time, not in batches
 - Each conflict: 2-4 strategy options + "自定义修改" option (with suggestions)
+- **Clarification loop**: Unlimited questions per conflict until uniqueness confirmed (max 10 rounds)
+- **ModuleOverlap conflicts**: Display overlap_analysis with existing modules
+- **Agent re-analysis**: Dynamic strategy updates based on user clarifications
 
 ### Success Criteria
 ```
-✓ CLI analysis returns valid JSON structure
-✓ Conflicts presented in batches (max 10 per round)
+✓ CLI analysis returns valid JSON structure with ModuleOverlap category
+✓ Agent performs scenario uniqueness detection (searches existing modules)
+✓ Conflicts processed ONE BY ONE with iterative clarification
 ✓ Min 2 strategies per conflict with modifications
+✓ ModuleOverlap conflicts include overlap_analysis with existing modules
+✓ Strategies requiring clarification include clarification_needed questions
 ✓ Each conflict includes 2-5 modification_suggestions
-✓ Text output displays all conflicts correctly with suggestions
-✓ User selections captured and processed
+✓ Text output displays conflict with overlap analysis (if ModuleOverlap)
+✓ User selections captured per conflict
+✓ Clarification loop continues until uniqueness confirmed (unlimited rounds, max 10)
+✓ Agent re-analysis with user clarifications updates strategy
+✓ Uniqueness confirmation based on clear scenario boundaries
 ✓ Edit tool applies modifications successfully
-✓ Custom conflicts displayed with suggestions for manual handling
+✓ Custom conflicts displayed with overlap_analysis for manual handling
 ✓ guidance-specification.md updated with resolved conflicts
 ✓ Role analyses (*.md) updated with resolved conflicts
-✓ context-package.json marked as "resolved"
+✓ context-package.json marked as "resolved" with clarification records
 ✓ No CONFLICT_RESOLUTION.md file generated
-✓ Modification summary includes custom conflict count
-✓ Agent log saved to .workflow/{session_id}/.chat/
+✓ Modification summary includes:
+  - Total conflicts
+  - Resolved with strategy (count)
+  - Custom handling (count)
+  - Clarification records
+  - Overlap analysis for custom ModuleOverlap conflicts
+✓ Agent log saved to .workflow/active/{session_id}/.chat/
 ✓ Error handling robust (validate/retry/degrade)
 ```
 

.claude/commands/workflow/tools/context-gather.md

@@ -22,7 +22,7 @@ Orchestrator command that invokes `context-search-agent` to gather comprehensive
 - **Agent Delegation**: Delegate all discovery to `context-search-agent` for autonomous execution
 - **Detection-First**: Check for existing context-package before executing
 - **Plan Mode**: Full comprehensive analysis (vs lightweight brainstorm mode)
-- **Standardized Output**: Generate `.workflow/{session}/.process/context-package.json`
+- **Standardized Output**: Generate `.workflow/active/{session}/.process/context-package.json`
 
 ## Execution Flow
 
@@ -71,9 +71,10 @@ You are executing as context-search-agent (.claude/agents/context-search-agent.m
 Execute complete context-search-agent workflow for implementation planning:
 
 ### Phase 1: Initialization & Pre-Analysis
-1. **Detection**: Check for existing context-package (early exit if valid)
-2. **Foundation**: Initialize code-index, get project structure, load docs
-3. **Analysis**: Extract keywords, determine scope, classify complexity
+1. **Project State Loading**: Read and parse `.workflow/project.json`. Use its `overview` section as the foundational `project_context`. This is your primary source for architecture, tech stack, and key components. If file doesn't exist, proceed with fresh analysis.
+2. **Detection**: Check for existing context-package (early exit if valid)
+3. **Foundation**: Initialize code-index, get project structure, load docs
+4. **Analysis**: Extract keywords, determine scope, classify complexity based on task description and project state
 
 ### Phase 2: Multi-Source Context Discovery
 Execute all 4 discovery tracks:
@@ -84,16 +85,17 @@ Execute all 4 discovery tracks:
 
 ### Phase 3: Synthesis, Assessment & Packaging
 1. Apply relevance scoring and build dependency graph
-2. Synthesize 4-source data (archive > docs > code > web)
-3. Integrate brainstorm artifacts (if .brainstorming/ exists, read content)
-4. Perform conflict detection with risk assessment
-5. **Inject historical conflicts** from archive analysis into conflict_detection
-6. Generate and validate context-package.json
+2. **Synthesize 4-source data**: Merge findings from all sources (archive > docs > code > web). **Prioritize the context from `project.json`** for architecture and tech stack unless code analysis reveals it's outdated.
+3. **Populate `project_context`**: Directly use the `overview` from `project.json` to fill the `project_context` section of the output `context-package.json`. Include technology_stack, architecture, key_components, and entry_points.
+4. Integrate brainstorm artifacts (if .brainstorming/ exists, read content)
+5. Perform conflict detection with risk assessment
+6. **Inject historical conflicts** from archive analysis into conflict_detection
+7. Generate and validate context-package.json
 
 ## Output Requirements
 Complete context-package.json with:
 - **metadata**: task_description, keywords, complexity, tech_stack, session_id
-- **project_context**: architecture_patterns, coding_conventions, tech_stack
+- **project_context**: architecture_patterns, coding_conventions, tech_stack (sourced from `project.json` overview)
 - **assets**: {documentation[], source_code[], config[], tests[]} with relevance scores
 - **dependencies**: {internal[], external[]} with dependency graph
 - **brainstorm_artifacts**: {guidance_specification, role_analyses[], synthesis_output} with content
@@ -139,7 +141,7 @@ Refer to `context-search-agent.md` Phase 3.7 for complete `context-package.json`
 
 **Key Sections**:
 - **metadata**: Session info, keywords, complexity, tech stack
-- **project_context**: Architecture patterns, conventions, tech stack
+- **project_context**: Architecture patterns, conventions, tech stack (populated from `project.json` overview)
 - **assets**: Categorized files with relevance scores (documentation, source_code, config, tests)
 - **dependencies**: Internal and external dependency graphs
 - **brainstorm_artifacts**: Brainstorm documents with full content (if exists)
@@ -154,7 +156,7 @@ The context-search-agent MUST perform historical archive analysis as Track 1 in
 **Step 1: Check for Archive Manifest**
 ```bash
 # Check if archive manifest exists
-if [[ -f .workflow/.archives/manifest.json ]]; then
+if [[ -f .workflow/archives/manifest.json ]]; then
   # Manifest available for querying
 fi
 ```
@@ -233,7 +235,7 @@ if (historicalConflicts.length > 0 && currentRisk === "low") {
 ### Archive Query Algorithm
 
 ```markdown
-1. IF .workflow/.archives/manifest.json does NOT exist → Skip Track 1, continue to Track 2
+1. IF .workflow/archives/manifest.json does NOT exist → Skip Track 1, continue to Track 2
 2. IF manifest exists:
    a. Load manifest.json
    b. Extract keywords from task_description (nouns, verbs, technical terms)
@@ -250,33 +252,10 @@ if (historicalConflicts.length > 0 && currentRisk === "low") {
 3. Continue to Track 2 (reference documentation)
 ```
 
-## Usage Examples
-
-### Basic Usage
-```bash
-/workflow:tools:context-gather --session WFS-auth-feature "Implement JWT authentication with refresh tokens"
-```
-## Success Criteria
-
-- ✅ Valid context-package.json generated in `.workflow/{session}/.process/`
-- ✅ Contains >80% relevant files based on task keywords
-- ✅ Execution completes within 2 minutes
-- ✅ All required schema fields present and valid
-- ✅ Conflict risk accurately assessed
-- ✅ Agent reports completion with statistics
-
-## Error Handling
-
-| Error | Cause | Resolution |
-|-------|-------|------------|
-| Package validation failed | Invalid session_id in existing package | Re-run agent to regenerate |
-| Agent execution timeout | Large codebase or slow MCP | Increase timeout, check code-index status |
-| Missing required fields | Agent incomplete execution | Check agent logs, verify schema compliance |
-| File count exceeds limit | Too many relevant files | Agent should auto-prioritize top 50 by relevance |
-
 ## Notes
 
 - **Detection-first**: Always check for existing package before invoking agent
+- **Project.json integration**: Agent reads `.workflow/project.json` as primary source for project context, avoiding redundant analysis
 - **Agent autonomy**: Agent handles all discovery logic per `.claude/agents/context-search-agent.md`
 - **No redundancy**: This command is a thin orchestrator, all logic in agent
 - **Plan-specific**: Use this for implementation planning; brainstorm mode uses direct agent call

.claude/commands/workflow/tools/task-generate-agent.md

@@ -36,7 +36,7 @@ Autonomous task JSON and IMPL_PLAN.md generation using action-planning-agent wit
   // Path selected by command based on --cli-execute flag, agent reads it
   "session_metadata": {
     // If in memory: use cached content
-    // Else: Load from .workflow/{session-id}/workflow-session.json
+    // Else: Load from .workflow/active//{session-id}/workflow-session.json
   },
   "brainstorm_artifacts": {
     // Loaded from context-package.json → brainstorm_artifacts section
@@ -50,10 +50,10 @@ Autonomous task JSON and IMPL_PLAN.md generation using action-planning-agent wit
     "synthesis_output": {"path": "...", "exists": true},
     "conflict_resolution": {"path": "...", "exists": true}  // if conflict_risk >= medium
   },
-  "context_package_path": ".workflow/{session-id}/.process/context-package.json",
+  "context_package_path": ".workflow/active//{session-id}/.process/context-package.json",
   "context_package": {
     // If in memory: use cached content
-    // Else: Load from .workflow/{session-id}/.process/context-package.json
+    // Else: Load from .workflow/active//{session-id}/.process/context-package.json
   },
   "mcp_capabilities": {
     "code_index": true,
@@ -67,14 +67,14 @@ Autonomous task JSON and IMPL_PLAN.md generation using action-planning-agent wit
 1. **Load Session Context** (if not in memory)
    ```javascript
    if (!memory.has("workflow-session.json")) {
-     Read(.workflow/{session-id}/workflow-session.json)
+     Read(.workflow/active//{session-id}/workflow-session.json)
    }
    ```
 
 2. **Load Context Package** (if not in memory)
    ```javascript
    if (!memory.has("context-package.json")) {
-     Read(.workflow/{session-id}/.process/context-package.json)
+     Read(.workflow/active//{session-id}/.process/context-package.json)
    }
    ```
 
@@ -176,18 +176,18 @@ Refer to: @.claude/agents/action-planning-agent.md for:
 ### Required Outputs Summary
 
 #### 1. Task JSON Files (.task/IMPL-*.json)
-- **Location**: `.workflow/{session-id}/.task/`
+- **Location**: `.workflow/active//{session-id}/.task/`
 - **Template**: Read from `{template_path}` (pre-selected by command based on `--cli-execute` flag)
 - **Schema**: 5-field structure (id, title, status, meta, context, flow_control) with artifacts integration
 - **Details**: See action-planning-agent.md § Task JSON Generation
 
 #### 2. IMPL_PLAN.md
-- **Location**: `.workflow/{session-id}/IMPL_PLAN.md`
+- **Location**: `.workflow/active//{session-id}/IMPL_PLAN.md`
 - **Template**: `~/.claude/workflows/cli-templates/prompts/workflow/impl-plan-template.txt`
 - **Details**: See action-planning-agent.md § Implementation Plan Creation
 
 #### 3. TODO_LIST.md
-- **Location**: `.workflow/{session-id}/TODO_LIST.md`
+- **Location**: `.workflow/active//{session-id}/TODO_LIST.md`
 - **Format**: Hierarchical task list with status indicators (▸, [ ], [x]) and JSON links
 - **Details**: See action-planning-agent.md § TODO List Generation
 
@@ -213,8 +213,6 @@ Refer to: @.claude/agents/action-planning-agent.md for:
 Generate all three documents and report completion status:
 - Task JSON files created: N files
 - Artifacts integrated: synthesis-spec, guidance-specification, N role analyses
-- MCP enhancements: code-index, exa-research
-- Session ready for execution: /workflow:execute
 `
 )
 ```
@@ -231,13 +229,13 @@ const agentContext = {
   // Use memory if available, else load
   session_metadata: memory.has("workflow-session.json")
     ? memory.get("workflow-session.json")
-    : Read(.workflow/WFS-[id]/workflow-session.json),
+    : Read(.workflow/active/WFS-[id]/workflow-session.json),
 
-  context_package_path: ".workflow/WFS-[id]/.process/context-package.json",
+  context_package_path: ".workflow/active/WFS-[id]/.process/context-package.json",
 
   context_package: memory.has("context-package.json")
     ? memory.get("context-package.json")
-    : Read(".workflow/WFS-[id]/.process/context-package.json"),
+    : Read(".workflow/active/WFS-[id]/.process/context-package.json"),
 
   // Extract brainstorm artifacts from context package
   brainstorm_artifacts: extractBrainstormArtifacts(context_package),

.claude/commands/workflow/tools/task-generate-tdd.md

@@ -74,7 +74,7 @@ Autonomous TDD task JSON and IMPL_PLAN.md generation using action-planning-agent
   "workflow_type": "tdd",
   "session_metadata": {
     // If in memory: use cached content
-    // Else: Load from .workflow/{session-id}/workflow-session.json
+    // Else: Load from .workflow/active//{session-id}/workflow-session.json
   },
   "brainstorm_artifacts": {
     // Loaded from context-package.json → brainstorm_artifacts section
@@ -88,12 +88,12 @@ Autonomous TDD task JSON and IMPL_PLAN.md generation using action-planning-agent
     "synthesis_output": {"path": "...", "exists": true},
     "conflict_resolution": {"path": "...", "exists": true}  // if conflict_risk >= medium
   },
-  "context_package_path": ".workflow/{session-id}/.process/context-package.json",
+  "context_package_path": ".workflow/active//{session-id}/.process/context-package.json",
   "context_package": {
     // If in memory: use cached content
-    // Else: Load from .workflow/{session-id}/.process/context-package.json
+    // Else: Load from .workflow/active//{session-id}/.process/context-package.json
   },
-  "test_context_package_path": ".workflow/{session-id}/.process/test-context-package.json",
+  "test_context_package_path": ".workflow/active//{session-id}/.process/test-context-package.json",
   "test_context_package": {
     // Existing test patterns and coverage analysis
   },
@@ -109,21 +109,21 @@ Autonomous TDD task JSON and IMPL_PLAN.md generation using action-planning-agent
 1. **Load Session Context** (if not in memory)
    ```javascript
    if (!memory.has("workflow-session.json")) {
-     Read(.workflow/{session-id}/workflow-session.json)
+     Read(.workflow/active//{session-id}/workflow-session.json)
    }
    ```
 
 2. **Load Context Package** (if not in memory)
    ```javascript
    if (!memory.has("context-package.json")) {
-     Read(.workflow/{session-id}/.process/context-package.json)
+     Read(.workflow/active//{session-id}/.process/context-package.json)
    }
    ```
 
 3. **Load Test Context Package** (if not in memory)
    ```javascript
    if (!memory.has("test-context-package.json")) {
-     Read(.workflow/{session-id}/.process/test-context-package.json)
+     Read(.workflow/active//{session-id}/.process/test-context-package.json)
    }
    ```
 
@@ -245,7 +245,7 @@ Refer to: @.claude/agents/action-planning-agent.md for:
 #### Required Outputs Summary
 
 ##### 1. TDD Task JSON Files (.task/IMPL-*.json)
-- **Location**: `.workflow/{session-id}/.task/`
+- **Location**: `.workflow/active//{session-id}/.task/`
 - **Template**: Read from `{template_path}` (pre-selected by command based on `--cli-execute` flag)
 - **Schema**: 5-field structure with TDD-specific metadata
   - `meta.tdd_workflow`: true (REQUIRED)
@@ -259,14 +259,14 @@ Refer to: @.claude/agents/action-planning-agent.md for:
 - **Details**: See action-planning-agent.md § TDD Task JSON Generation
 
 ##### 2. IMPL_PLAN.md (TDD Variant)
-- **Location**: `.workflow/{session-id}/IMPL_PLAN.md`
+- **Location**: `.workflow/active//{session-id}/IMPL_PLAN.md`
 - **Template**: `~/.claude/workflows/cli-templates/prompts/workflow/impl-plan-template.txt`
 - **TDD-Specific Frontmatter**: workflow_type="tdd", tdd_workflow=true, feature_count, task_breakdown
 - **TDD Implementation Tasks Section**: Feature-by-feature with internal Red-Green-Refactor cycles
 - **Details**: See action-planning-agent.md § TDD Implementation Plan Creation
 
 ##### 3. TODO_LIST.md
-- **Location**: `.workflow/{session-id}/TODO_LIST.md`
+- **Location**: `.workflow/active//{session-id}/TODO_LIST.md`
 - **Format**: Hierarchical task list with internal TDD phase indicators (Red → Green → Refactor)
 - **Status**: ▸ (container), [ ] (pending), [x] (completed)
 - **Details**: See action-planning-agent.md § TODO List Generation
@@ -338,19 +338,19 @@ const agentContext = {
   // Use memory if available, else load
   session_metadata: memory.has("workflow-session.json")
     ? memory.get("workflow-session.json")
-    : Read(.workflow/WFS-[id]/workflow-session.json),
+    : Read(.workflow/active/WFS-[id]/workflow-session.json),
 
-  context_package_path: ".workflow/WFS-[id]/.process/context-package.json",
+  context_package_path: ".workflow/active/WFS-[id]/.process/context-package.json",
 
   context_package: memory.has("context-package.json")
     ? memory.get("context-package.json")
-    : Read(".workflow/WFS-[id]/.process/context-package.json"),
+    : Read(".workflow/active/WFS-[id]/.process/context-package.json"),
 
-  test_context_package_path: ".workflow/WFS-[id]/.process/test-context-package.json",
+  test_context_package_path: ".workflow/active/WFS-[id]/.process/test-context-package.json",
 
   test_context_package: memory.has("test-context-package.json")
     ? memory.get("test-context-package.json")
-    : Read(".workflow/WFS-[id]/.process/test-context-package.json"),
+    : Read(".workflow/active/WFS-[id]/.process/test-context-package.json"),
 
   // Extract brainstorm artifacts from context package
   brainstorm_artifacts: extractBrainstormArtifacts(context_package),
@@ -384,7 +384,7 @@ This section provides quick reference for TDD task JSON structure. For complete
 
 ## Output Files Structure
 ```
-.workflow/{session-id}/
+.workflow/active//{session-id}/
 ├── IMPL_PLAN.md                     # Unified plan with TDD Implementation Tasks section
 ├── TODO_LIST.md                     # Progress tracking with internal TDD phase indicators
 ├── .task/

.claude/commands/workflow/tools/task-generate.md

@@ -77,8 +77,8 @@ The command follows a streamlined, three-step process to convert analysis into e
 
 ### Step 1: Input & Discovery
 The process begins by gathering all necessary inputs. It follows a **Memory-First Rule**, skipping file reads if documents are already in the conversation memory.
-1.  **Session Validation**: Loads and validates the session from `.workflow/{session_id}/workflow-session.json`.
-2.  **Context Package Loading** (primary source): Reads `.workflow/{session_id}/.process/context-package.json` for smart context and artifact catalog.
+1.  **Session Validation**: Loads and validates the session from `.workflow/active/{session_id}/workflow-session.json`.
+2.  **Context Package Loading** (primary source): Reads `.workflow/active/{session_id}/.process/context-package.json` for smart context and artifact catalog.
 3.  **Brainstorm Artifacts Extraction**: Extracts role analysis paths from `context-package.json` → `brainstorm_artifacts.role_analyses[]` (supports `analysis*.md` automatically).
 4.  **Document Loading**: Reads role analyses, guidance specification, synthesis output, and conflict resolution (if exists) using paths from context package.
 
@@ -224,7 +224,7 @@ Each task JSON embeds all necessary context, artifacts, and execution steps usin
 - `id`: Task identifier (format: `IMPL-N` or `IMPL-N.M` for subtasks)
 - `title`: Descriptive task name
 - `status`: Task state (`pending|active|completed|blocked|container`)
-- `context_package_path`: Path to context package (`.workflow/WFS-[session]/.process/context-package.json`)
+- `context_package_path`: Path to context package (`.workflow/active/WFS-[session]/.process/context-package.json`)
 - `meta`: Task metadata
 - `context`: Task-specific context and requirements
 - `flow_control`: Execution steps and workflow
@@ -269,7 +269,7 @@ Each task JSON embeds all necessary context, artifacts, and execution steps usin
   "id": "IMPL-1",
   "title": "Implement feature X with Y components",
   "status": "pending",
-  "context_package_path": ".workflow/WFS-session/.process/context-package.json",
+  "context_package_path": ".workflow/active/WFS-session/.process/context-package.json",
   "meta": {
     "type": "feature",
     "agent": "@code-developer",
@@ -291,7 +291,7 @@ Each task JSON embeds all necessary context, artifacts, and execution steps usin
     "depends_on": [],
     "artifacts": [
       {
-        "path": ".workflow/WFS-session/.brainstorming/system-architect/analysis.md",
+        "path": ".workflow/active/WFS-session/.brainstorming/system-architect/analysis.md",
         "priority": "highest",
         "usage": "Architecture decisions and API specifications"
       }
@@ -353,10 +353,10 @@ This document provides a high-level overview of the entire implementation plan.
 ---
 identifier: WFS-{session-id}
 source: "User requirements" | "File: path" | "Issue: ISS-001"
-role_analyses: .workflow/{session-id}/.brainstorming/[role]/analysis*.md
-artifacts: .workflow/{session-id}/.brainstorming/
-context_package: .workflow/{session-id}/.process/context-package.json  # CCW smart context
-guidance_specification: .workflow/{session-id}/.brainstorming/guidance-specification.md  # Finalized decisions with resolved conflicts
+role_analyses: .workflow/active//{session-id}/.brainstorming/[role]/analysis*.md
+artifacts: .workflow/active//{session-id}/.brainstorming/
+context_package: .workflow/active//{session-id}/.process/context-package.json  # CCW smart context
+guidance_specification: .workflow/active//{session-id}/.brainstorming/guidance-specification.md  # Finalized decisions with resolved conflicts
 workflow_type: "standard | tdd | design"  # Indicates execution model
 verification_history:  # CCW quality gates
   synthesis_clarify: "passed | skipped | pending"  # Brainstorm phase clarification
@@ -606,7 +606,7 @@ A simple Markdown file for tracking the status of each task.
 ### 6.4. Output Files Diagram
 The command organizes outputs into a standard directory structure.
 ```
-.workflow/{session-id}/
+.workflow/active//{session-id}/
 ├── IMPL_PLAN.md                     # Implementation plan
 ├── TODO_LIST.md                     # Progress tracking
 ├── .task/

.claude/commands/workflow/tools/tdd-coverage-analysis.md

@@ -21,7 +21,7 @@ Analyze test coverage and verify Red-Green-Refactor cycle execution for TDD work
 
 ### Phase 1: Extract Test Tasks
 ```bash
-find .workflow/{session_id}/.task/ -name 'TEST-*.json' -exec jq -r '.context.focus_paths[]' {} \;
+find .workflow/active/{session_id}/.task/ -name 'TEST-*.json' -exec jq -r '.context.focus_paths[]' {} \;
 ```
 
 **Output**: List of test directories/files from all TEST tasks
@@ -29,20 +29,20 @@ find .workflow/{session_id}/.task/ -name 'TEST-*.json' -exec jq -r '.context.foc
 ### Phase 2: Run Test Suite
 ```bash
 # Node.js/JavaScript
-npm test -- --coverage --json > .workflow/{session_id}/.process/test-results.json
+npm test -- --coverage --json > .workflow/active/{session_id}/.process/test-results.json
 
 # Python
-pytest --cov --json-report > .workflow/{session_id}/.process/test-results.json
+pytest --cov --json-report > .workflow/active/{session_id}/.process/test-results.json
 
 # Other frameworks (detect from project)
-[test_command] --coverage --json-output .workflow/{session_id}/.process/test-results.json
+[test_command] --coverage --json-output .workflow/active/{session_id}/.process/test-results.json
 ```
 
 **Output**: test-results.json with coverage data
 
 ### Phase 3: Parse Coverage Data
 ```bash
-jq '.coverage' .workflow/{session_id}/.process/test-results.json > .workflow/{session_id}/.process/coverage-report.json
+jq '.coverage' .workflow/active/{session_id}/.process/test-results.json > .workflow/active/{session_id}/.process/coverage-report.json
 ```
 
 **Extract**:
@@ -58,7 +58,7 @@ For each TDD chain (TEST-N.M -> IMPL-N.M -> REFACTOR-N.M):
 **1. Red Phase Verification**
 ```bash
 # Check TEST task summary
-cat .workflow/{session_id}/.summaries/TEST-N.M-summary.md
+cat .workflow/active/{session_id}/.summaries/TEST-N.M-summary.md
 ```
 
 Verify:
@@ -69,7 +69,7 @@ Verify:
 **2. Green Phase Verification**
 ```bash
 # Check IMPL task summary
-cat .workflow/{session_id}/.summaries/IMPL-N.M-summary.md
+cat .workflow/active/{session_id}/.summaries/IMPL-N.M-summary.md
 ```
 
 Verify:
@@ -80,7 +80,7 @@ Verify:
 **3. Refactor Phase Verification**
 ```bash
 # Check REFACTOR task summary
-cat .workflow/{session_id}/.summaries/REFACTOR-N.M-summary.md
+cat .workflow/active/{session_id}/.summaries/REFACTOR-N.M-summary.md
 ```
 
 Verify:
@@ -90,7 +90,7 @@ Verify:
 
 ### Phase 5: Generate Analysis Report
 
-Create `.workflow/{session_id}/.process/tdd-cycle-report.md`:
+Create `.workflow/active/{session_id}/.process/tdd-cycle-report.md`:
 
 ```markdown
 # TDD Cycle Analysis - {Session ID}
@@ -146,7 +146,7 @@ Create `.workflow/{session_id}/.process/tdd-cycle-report.md`:
 
 ## Output Files
 ```
-.workflow/{session-id}/
+.workflow/active//{session-id}/
 └── .process/
     ├── test-results.json         # Raw test execution results
     ├── coverage-report.json      # Parsed coverage data
@@ -272,6 +272,6 @@ Function Coverage: 91%
 
 Overall Compliance: 93/100
 
-Detailed report: .workflow/WFS-auth/.process/tdd-cycle-report.md
+Detailed report: .workflow/active/WFS-auth/.process/tdd-cycle-report.md
 ```
 

.claude/commands/workflow/tools/test-concept-enhanced.md

@@ -3,7 +3,7 @@ name: test-concept-enhanced
 description: Analyze test requirements and generate test generation strategy using Gemini with test-context package
 argument-hint: "--session WFS-test-session-id --context path/to/test-context-package.json"
 examples:
-  - /workflow:tools:test-concept-enhanced --session WFS-test-auth --context .workflow/WFS-test-auth/.process/test-context-package.json
+  - /workflow:tools:test-concept-enhanced --session WFS-test-auth --context .workflow/active/WFS-test-auth/.process/test-context-package.json
 ---
 
 # Test Concept Enhanced Command
@@ -30,7 +30,7 @@ Specialized analysis tool for test generation workflows that uses Gemini to anal
 ### Phase 1: Validation & Preparation
 
 1. **Session Validation**
-   - Load `.workflow/{test_session_id}/workflow-session.json`
+   - Load `.workflow/active/{test_session_id}/workflow-session.json`
    - Verify test session type is "test-gen"
    - Extract source session reference
 
@@ -48,11 +48,11 @@ Specialized analysis tool for test generation workflows that uses Gemini to anal
 
 **Tool Configuration**:
 ```bash
-cd .workflow/{test_session_id}/.process && gemini -p "
+cd .workflow/active/{test_session_id}/.process && gemini -p "
 PURPOSE: Analyze test coverage gaps and design comprehensive test generation strategy
 TASK: Study implementation context, existing tests, and generate test requirements for missing coverage
 MODE: analysis
-CONTEXT: @{.workflow/{test_session_id}/.process/test-context-package.json}
+CONTEXT: @{.workflow/active/{test_session_id}/.process/test-context-package.json}
 
 **MANDATORY FIRST STEP**: Read and analyze test-context-package.json to understand:
 - Test coverage gaps from test_coverage.missing_tests[]
@@ -226,13 +226,13 @@ RULES:
 - Prioritize critical business logic tests
 - Specify clear test scenarios and coverage targets
 - Identify all dependencies requiring mocks
-- **MUST write output to .workflow/{test_session_id}/.process/gemini-test-analysis.md**
+- **MUST write output to .workflow/active/{test_session_id}/.process/gemini-test-analysis.md**
 - Do NOT generate actual test code or implementation
 - Output ONLY test analysis and generation strategy
 " --approval-mode yolo
 ```
 
-**Output Location**: `.workflow/{test_session_id}/.process/gemini-test-analysis.md`
+**Output Location**: `.workflow/active/{test_session_id}/.process/gemini-test-analysis.md`
 
 ### Phase 3: Results Synthesis
 
@@ -408,7 +408,7 @@ Synthesize Gemini analysis into standardized format:
 - **Coverage Tools**: {coverage_tool_if_detected}
 ```
 
-**Output Location**: `.workflow/{test_session_id}/.process/TEST_ANALYSIS_RESULTS.md`
+**Output Location**: `.workflow/active/{test_session_id}/.process/TEST_ANALYSIS_RESULTS.md`
 
 ## Error Handling
 

.claude/commands/workflow/tools/test-context-gather.md

@@ -22,7 +22,7 @@ Orchestrator command that invokes `test-context-search-agent` to gather comprehe
 - **Detection-First**: Check for existing test-context-package before executing
 - **Coverage-First**: Analyze existing test coverage before planning new tests
 - **Source Context Loading**: Import implementation summaries from source session
-- **Standardized Output**: Generate `.workflow/{test_session_id}/.process/test-context-package.json`
+- **Standardized Output**: Generate `.workflow/active/{test_session_id}/.process/test-context-package.json`
 
 ## Execution Flow
 
@@ -164,7 +164,7 @@ Refer to `test-context-search-agent.md` Phase 3.2 for complete `test-context-pac
 
 ## Success Criteria
 
-- ✅ Valid test-context-package.json generated in `.workflow/{test_session_id}/.process/`
+- ✅ Valid test-context-package.json generated in `.workflow/active/{test_session_id}/.process/`
 - ✅ Source session context loaded successfully
 - ✅ Test coverage gaps identified (>90% accuracy)
 - ✅ Test framework detected and documented

.claude/commands/workflow/tools/test-task-generate.md

@@ -54,14 +54,14 @@ Autonomous test-fix task JSON generation using action-planning-agent with two-ph
   "use_codex": true | false,  // Determined by --use-codex flag
   "session_metadata": {
     // If in memory: use cached content
-    // Else: Load from .workflow/{test-session-id}/workflow-session.json
+    // Else: Load from .workflow/active/{test-session-id}/workflow-session.json
   },
-  "test_analysis_results_path": ".workflow/{test-session-id}/.process/TEST_ANALYSIS_RESULTS.md",
+  "test_analysis_results_path": ".workflow/active/{test-session-id}/.process/TEST_ANALYSIS_RESULTS.md",
   "test_analysis_results": {
     // If in memory: use cached content
     // Else: Load from TEST_ANALYSIS_RESULTS.md
   },
-  "test_context_package_path": ".workflow/{test-session-id}/.process/test-context-package.json",
+  "test_context_package_path": ".workflow/active/{test-session-id}/.process/test-context-package.json",
   "test_context_package": {
     // Existing test patterns and coverage analysis
   },
@@ -81,28 +81,28 @@ Autonomous test-fix task JSON generation using action-planning-agent with two-ph
 1. **Load Test Session Context** (if not in memory)
    ```javascript
    if (!memory.has("workflow-session.json")) {
-     Read(.workflow/{test-session-id}/workflow-session.json)
+     Read(.workflow/active/{test-session-id}/workflow-session.json)
    }
    ```
 
 2. **Load TEST_ANALYSIS_RESULTS.md** (if not in memory, REQUIRED)
    ```javascript
    if (!memory.has("TEST_ANALYSIS_RESULTS.md")) {
-     Read(.workflow/{test-session-id}/.process/TEST_ANALYSIS_RESULTS.md)
+     Read(.workflow/active/{test-session-id}/.process/TEST_ANALYSIS_RESULTS.md)
    }
    ```
 
 3. **Load Test Context Package** (if not in memory)
    ```javascript
    if (!memory.has("test-context-package.json")) {
-     Read(.workflow/{test-session-id}/.process/test-context-package.json)
+     Read(.workflow/active/{test-session-id}/.process/test-context-package.json)
    }
    ```
 
 4. **Load Source Session Summaries** (if source_session_id exists)
    ```javascript
    if (sessionMetadata.source_session_id) {
-     const summaryFiles = Bash("find .workflow/{source-session-id}/.summaries/ -name 'IMPL-*-summary.md'")
+     const summaryFiles = Bash("find .workflow/active/{source-session-id}/.summaries/ -name 'IMPL-*-summary.md'")
      summaryFiles.forEach(file => Read(file))
    }
    ```
@@ -205,7 +205,7 @@ Refer to: @.claude/agents/action-planning-agent.md for:
 #### Required Outputs Summary
 
 ##### 1. Test Task JSON Files (.task/IMPL-*.json)
-- **Location**: `.workflow/{test-session-id}/.task/`
+- **Location**: `.workflow/active/{test-session-id}/.task/`
 - **Template**: Read from `{template_path}` (pre-selected by command based on `--cli-execute` flag)
 - **Schema**: 5-field structure with test-specific metadata
   - IMPL-001: `meta.type: "test-gen"`, `meta.agent: "@code-developer"`
@@ -214,14 +214,14 @@ Refer to: @.claude/agents/action-planning-agent.md for:
 - **Details**: See action-planning-agent.md § Test Task JSON Generation
 
 ##### 2. IMPL_PLAN.md (Test Variant)
-- **Location**: `.workflow/{test-session-id}/IMPL_PLAN.md`
+- **Location**: `.workflow/active/{test-session-id}/IMPL_PLAN.md`
 - **Template**: `~/.claude/workflows/cli-templates/prompts/workflow/impl-plan-template.txt`
 - **Test-Specific Frontmatter**: workflow_type="test_session", test_framework, source_session_id
 - **Test-Fix-Retest Cycle Section**: Iterative fix cycle with Gemini diagnosis
 - **Details**: See action-planning-agent.md § Test Implementation Plan Creation
 
 ##### 3. TODO_LIST.md
-- **Location**: `.workflow/{test-session-id}/TODO_LIST.md`
+- **Location**: `.workflow/active/{test-session-id}/TODO_LIST.md`
 - **Format**: Task list with test generation and execution phases
 - **Status**: [ ] (pending), [x] (completed)
 - **Details**: See action-planning-agent.md § TODO List Generation
@@ -273,19 +273,19 @@ const agentContext = {
   // Use memory if available, else load
   session_metadata: memory.has("workflow-session.json")
     ? memory.get("workflow-session.json")
-    : Read(.workflow/WFS-test-[id]/workflow-session.json),
+    : Read(.workflow/active/WFS-test-[id]/workflow-session.json),
 
-  test_analysis_results_path: ".workflow/WFS-test-[id]/.process/TEST_ANALYSIS_RESULTS.md",
+  test_analysis_results_path: ".workflow/active/WFS-test-[id]/.process/TEST_ANALYSIS_RESULTS.md",
 
   test_analysis_results: memory.has("TEST_ANALYSIS_RESULTS.md")
     ? memory.get("TEST_ANALYSIS_RESULTS.md")
-    : Read(".workflow/WFS-test-[id]/.process/TEST_ANALYSIS_RESULTS.md"),
+    : Read(".workflow/active/WFS-test-[id]/.process/TEST_ANALYSIS_RESULTS.md"),
 
-  test_context_package_path: ".workflow/WFS-test-[id]/.process/test-context-package.json",
+  test_context_package_path: ".workflow/active/WFS-test-[id]/.process/test-context-package.json",
 
   test_context_package: memory.has("test-context-package.json")
     ? memory.get("test-context-package.json")
-    : Read(".workflow/WFS-test-[id]/.process/test-context-package.json"),
+    : Read(".workflow/active/WFS-test-[id]/.process/test-context-package.json"),
 
   // Load source session summaries if exists
   source_session_id: session_metadata.source_session_id || null,
@@ -312,7 +312,7 @@ This section provides quick reference for test task JSON structure. For complete
 
 ## Output Files Structure
 ```
-.workflow/WFS-test-[session]/
+.workflow/active/WFS-test-[session]/
 ├── workflow-session.json           # Test session metadata
 ├── IMPL_PLAN.md                    # Test validation plan
 ├── TODO_LIST.md                    # Progress tracking

.claude/commands/workflow/ui-design/animation-extract.md

@@ -67,7 +67,7 @@ if [ -n "$DESIGN_ID" ]; then
   relative_path=$(find .workflow -name "${DESIGN_ID}" -type d -print -quit)
 elif [ -n "$SESSION_ID" ]; then
   # Latest in session
-  relative_path=$(find .workflow/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
+  relative_path=$(find .workflow/active/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
 else
   # Latest globally
   relative_path=$(find .workflow -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)

.claude/commands/workflow/ui-design/design-sync.md

@@ -25,10 +25,10 @@ Synchronize finalized design system references to brainstorming artifacts, prepa
 
 ```bash
 # Validate session
-CHECK: .workflow/.active-* marker files; VALIDATE: session_id matches active session
+CHECK: find .workflow/active/ -name "WFS-*" -type d; VALIDATE: session_id matches active session
 
 # Verify design artifacts in latest design run
-latest_design = find_latest_path_matching(".workflow/WFS-{session}/design-run-*")
+latest_design = find_latest_path_matching(".workflow/active/WFS-{session}/design-run-*")
 
 # Detect design system structure
 IF exists({latest_design}/style-extraction/style-1/design-tokens.json):
@@ -51,7 +51,7 @@ REPORT: "Found {count} design artifacts, {prototype_count} prototypes"
 
 ```bash
 # Check if role analysis documents contains current design run reference
-synthesis_spec_path = ".workflow/WFS-{session}/.brainstorming/role analysis documents"
+synthesis_spec_path = ".workflow/active/WFS-{session}/.brainstorming/role analysis documents"
 current_design_run = basename(latest_design)  # e.g., "design-run-20250109-143022"
 
 IF exists(synthesis_spec_path):
@@ -68,8 +68,8 @@ IF exists(synthesis_spec_path):
 
 ```bash
 # Load target brainstorming artifacts (files to be updated)
-Read(.workflow/WFS-{session}/.brainstorming/role analysis documents)
-IF exists(.workflow/WFS-{session}/.brainstorming/ui-designer/analysis.md): Read(analysis.md)
+Read(.workflow/active/WFS-{session}/.brainstorming/role analysis documents)
+IF exists(.workflow/active/WFS-{session}/.brainstorming/ui-designer/analysis.md): Read(analysis.md)
 
 # Optional: Read prototype notes for descriptions (minimal context)
 FOR each selected_prototype IN selected_list:
@@ -113,7 +113,7 @@ Update `.brainstorming/role analysis documents` with design system references.
 **Implementation**:
 ```bash
 # Option 1: Edit existing section
-Edit(file_path=".workflow/WFS-{session}/.brainstorming/role analysis documents",
+Edit(file_path=".workflow/active/WFS-{session}/.brainstorming/role analysis documents",
      old_string="## UI/UX Guidelines\n[existing content]",
      new_string="## UI/UX Guidelines\n\n[new design reference content]")
 
@@ -128,15 +128,15 @@ IF section not found:
 
 ```bash
 # Always update ui-designer
-ui_designer_files = Glob(".workflow/WFS-{session}/.brainstorming/ui-designer/analysis*.md")
+ui_designer_files = Glob(".workflow/active/WFS-{session}/.brainstorming/ui-designer/analysis*.md")
 
 # Conditionally update other roles
 has_animations = exists({latest_design}/animation-extraction/animation-tokens.json)
 has_layouts = exists({latest_design}/layout-extraction/layout-templates.json)
 
-IF has_animations: ux_expert_files = Glob(".workflow/WFS-{session}/.brainstorming/ux-expert/analysis*.md")
-IF has_layouts: architect_files = Glob(".workflow/WFS-{session}/.brainstorming/system-architect/analysis*.md")
-IF selected_list: pm_files = Glob(".workflow/WFS-{session}/.brainstorming/product-manager/analysis*.md")
+IF has_animations: ux_expert_files = Glob(".workflow/active/WFS-{session}/.brainstorming/ux-expert/analysis*.md")
+IF has_layouts: architect_files = Glob(".workflow/active/WFS-{session}/.brainstorming/system-architect/analysis*.md")
+IF selected_list: pm_files = Glob(".workflow/active/WFS-{session}/.brainstorming/product-manager/analysis*.md")
 ```
 
 **Content Templates**:
@@ -223,11 +223,72 @@ For complete token definitions and usage examples, see:
 
 **Implementation**:
 ```bash
-Write(file_path=".workflow/WFS-{session}/.brainstorming/ui-designer/design-system-reference.md",
+Write(file_path=".workflow/active/WFS-{session}/.brainstorming/ui-designer/design-system-reference.md",
       content="[generated content with @ references]")
 ```
 
-### Phase 5: Completion
+### Phase 5: Update Context Package
+
+**Purpose**: Sync design system references to context-package.json
+
+**Operations**:
+```bash
+context_pkg_path = ".workflow/active/WFS-{session}/.process/context-package.json"
+
+# 1. Read existing package
+context_pkg = Read(context_pkg_path)
+
+# 2. Update brainstorm_artifacts (role analyses now contain @ design references)
+brainstorm_dir = ".workflow/active/WFS-{session}/.brainstorming"
+role_analysis_files = Glob({brainstorm_dir}/*/analysis*.md)
+
+context_pkg.brainstorm_artifacts.role_analyses = []
+FOR file IN role_analysis_files:
+    role_name = extract_role_from_path(file)
+    relative_path = file.replace({brainstorm_dir}/, "")
+
+    context_pkg.brainstorm_artifacts.role_analyses.push({
+        "role": role_name,
+        "files": [{
+            "path": relative_path,
+            "type": "primary",
+            "content": Read(file),  # Contains @ design system references
+            "updated_at": NOW()
+        }]
+    })
+
+# 3. Add design_system_references field
+context_pkg.design_system_references = {
+    "design_run_id": design_id,
+    "tokens": `${design_id}/${design_tokens_path}`,
+    "style_guide": `${design_id}/${style_guide_path}`,
+    "prototypes": selected_list.map(p => `${design_id}/prototypes/${p}.html`),
+    "updated_at": NOW()
+}
+
+# 4. Optional: Add animations and layouts if they exist
+IF exists({latest_design}/animation-extraction/animation-tokens.json):
+    context_pkg.design_system_references.animations = `${design_id}/animation-extraction/animation-tokens.json`
+
+IF exists({latest_design}/layout-extraction/layout-templates.json):
+    context_pkg.design_system_references.layouts = `${design_id}/layout-extraction/layout-templates.json`
+
+# 5. Update metadata
+context_pkg.metadata.updated_at = NOW()
+context_pkg.metadata.design_sync_timestamp = NOW()
+
+# 6. Write back
+Write(context_pkg_path, JSON.stringify(context_pkg, indent=2))
+
+REPORT: "✅ Updated context-package.json with design system references"
+```
+
+**TodoWrite Update**:
+```json
+{"content": "Update context package with design references", "status": "completed", "activeForm": "Updating context package"}
+```
+
+### Phase 6: Completion
 
 ```javascript
 TodoWrite({todos: [
@@ -259,7 +320,7 @@ Next: /workflow:plan [--agent] "<task description>"
 
 **Updated Files**:
 ```
-.workflow/WFS-{session}/.brainstorming/
+.workflow/active/WFS-{session}/.brainstorming/
 ├── role analysis documents              # Updated with UI/UX Guidelines section
 ├── ui-designer/
 │   ├── analysis*.md                     # Updated with design system references

.claude/commands/workflow/ui-design/explore-auto.md

@@ -24,8 +24,7 @@ allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Bash(*), Glob(*), Write(*
    - **IF should_extract_animation**: **Attach tasks → Execute → Collapse** → Auto-continues to Phase 9
    - **ELSE**: Skip (use code import) → Auto-continues to Phase 9
 5. Phase 9 (layout-extract) → **Attach tasks → Execute → Collapse** → Auto-continues to Phase 10
-6. **Phase 10 (ui-assembly)** → **Attach tasks → Execute → Collapse** → Auto-continues to Phase 11
-7. **Phase 11 (preview-generation)** → **Execute script → Generate preview files** → Reports completion
+6. **Phase 10 (ui-assembly)** → **Attach tasks → Execute → Collapse** → Workflow complete
 
 **Phase Transition Mechanism**:
 - **Phase 5 (User Interaction)**: User confirms targets → IMMEDIATELY triggers Phase 7
@@ -33,10 +32,9 @@ allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Bash(*), Glob(*), Write(*
 - **Task Execution**: Orchestrator **EXECUTES** these attached tasks itself
 - **Task Collapse**: After tasks complete, collapse them into phase summary
 - **Phase Transition**: Automatically execute next phase after collapsing
-- **Phase 11 (Script Execution)**: Execute preview generation script
 - No additional user interaction after Phase 5 confirmation
 
-**Auto-Continue Mechanism**: TodoWrite tracks phase status with dynamic task attachment/collapse. After executing all attached tasks, you MUST immediately collapse them, restore phase summary, and execute the next phase. No user intervention required. The workflow is NOT complete until reaching Phase 11 (preview generation).
+**Auto-Continue Mechanism**: TodoWrite tracks phase status with dynamic task attachment/collapse. After executing all attached tasks, you MUST immediately collapse them, restore phase summary, and execute the next phase. No user intervention required. The workflow is NOT complete until Phase 10 (UI assembly) finishes.
 
 **Task Attachment Model**: SlashCommand invocation is NOT delegation - it's task expansion. The orchestrator executes these attached tasks itself, not waiting for external completion.
 
@@ -50,7 +48,7 @@ allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Bash(*), Glob(*), Write(*
 4. **Default to All**: When selecting variants/prototypes, use ALL generated items
 5. **Track Progress**: Update TodoWrite dynamically with task attachment/collapse pattern
 6. **⚠️ CRITICAL: Task Attachment Model** - SlashCommand invocation **ATTACHES** tasks to current workflow. Orchestrator **EXECUTES** these attached tasks itself, not waiting for external completion. This is NOT delegation - it's task expansion.
-7. **⚠️ CRITICAL: DO NOT STOP** - This is a continuous multi-phase workflow. After executing all attached tasks, you MUST immediately collapse them and execute the next phase. Workflow is NOT complete until Phase 11 (preview generation).
+7. **⚠️ CRITICAL: DO NOT STOP** - This is a continuous multi-phase workflow. After executing all attached tasks, you MUST immediately collapse them and execute the next phase. Workflow is NOT complete until Phase 10 (UI assembly) finishes.
 
 ## Parameter Requirements
 
@@ -127,145 +125,83 @@ allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Bash(*), Glob(*), Write(*
 **Integrated vs. Standalone**:
 - `--session` flag determines session integration or standalone execution
 
-## 11-Phase Execution
+## 10-Phase Execution
 
 ### Phase 1: Parameter Parsing & Input Detection
+
+**Unified Principle**: Detect → Classify → Store (avoid string concatenation and escaping)
+
+**Step 1: Parameter Normalization**
 ```bash
-# Step 0: Parse and normalize parameters
-images_input = null
-prompt_text = null
-
-# Handle legacy parameters with deprecation warning
+# Legacy parameters (deprecated)
 IF --images OR --prompt:
-    WARN: "⚠️  DEPRECATION: --images and --prompt are deprecated. Use --input instead."
-    WARN: "   Example: --input \"design-refs/*\" or --input \"modern dashboard\""
-    images_input = --images
-    prompt_text = --prompt
+    WARN: "⚠️ --images/--prompt deprecated. Use --input"
+    images_input = --images; prompt_text = --prompt
 
-# Parse unified --input parameter
-IF --input:
-    # Split by | separator for multiple inputs
-    input_parts = split(--input, "|")
-
-    FOR part IN input_parts:
-        part = trim(part)
-
-        # Detection logic
-        IF contains(part, "*") OR glob_matches_files(part):
-            # Glob pattern detected → images
-            images_input = part
-        ELSE IF file_or_directory_exists(part):
-            # File/directory path → will be handled in code detection
-            IF NOT prompt_text:
-                prompt_text = part
-            ELSE:
-                prompt_text = prompt_text + " " + part
-        ELSE:
-            # Pure text → prompt
-            IF NOT prompt_text:
-                prompt_text = part
-            ELSE:
-                prompt_text = prompt_text + " " + part
-
-# Step 1: Detect design source from parsed inputs
-code_files_detected = false
-code_base_path = null
-has_visual_input = false
-
-IF prompt_text:
-    # Extract potential file paths from prompt
-    potential_paths = extract_paths_from_text(prompt_text)
-    FOR path IN potential_paths:
-        IF file_or_directory_exists(path):
-            code_files_detected = true
-            code_base_path = path
-            BREAK
-
-IF images_input:
-    # Check if images parameter points to existing files
-    IF glob_matches_files(images_input):
-        has_visual_input = true
-
-# Step 2: Determine design source strategy
-design_source = "unknown"
-IF code_files_detected AND has_visual_input:
-    design_source = "hybrid"  # Both code and visual
-ELSE IF code_files_detected:
-    design_source = "code_only"  # Only code files
-ELSE IF has_visual_input OR --prompt:
-    design_source = "visual_only"  # Only visual/prompt
-ELSE:
-    ERROR: "No design source provided (code files, images, or prompt required)"
-    EXIT 1
-
-STORE: design_source, code_base_path, has_visual_input
+# Unified --input (split by "|")
+ELSE IF --input:
+    FOR part IN split(--input, "|"):
+        IF "*" IN part OR glob_exists(part): images_input = part
+        ELSE IF path_exists(part): prompt_text += part
+        ELSE: prompt_text += part
 ```
 
+**Step 2: Design Source Detection**
+```bash
+code_base_path = extract_first_valid_path(prompt_text)
+has_visual_input = (images_input AND glob_exists(images_input))
+
+design_source = classify_source(code_base_path, has_visual_input):
+    • code + visual → "hybrid"
+    • code only → "code_only"
+    • visual/prompt → "visual_only"
+    • none → ERROR
+```
+
+**Stored Variables**: `design_source`, `code_base_path`, `has_visual_input`, `images_input`, `prompt_text`
+
+---
+
 ### Phase 2: Intelligent Prompt Parsing
+
+**Unified Principle**: explicit > inferred > default
+
 ```bash
-# Parse variant counts from prompt or use explicit/default values
-IF prompt_text AND (NOT --style-variants OR NOT --layout-variants):
-    style_variants = regex_extract(prompt_text, r"(\d+)\s*style") OR --style-variants OR 3
-    layout_variants = regex_extract(prompt_text, r"(\d+)\s*layout") OR --layout-variants OR 3
-ELSE:
-    style_variants = --style-variants OR 3
-    layout_variants = --layout-variants OR 3
+# Variant counts (priority chain)
+style_variants = --style-variants OR extract_number(prompt_text, "style") OR 3
+layout_variants = --layout-variants OR extract_number(prompt_text, "layout") OR 3
 
-VALIDATE: 1 <= style_variants <= 5, 1 <= layout_variants <= 5
-
-# Interactive mode (always enabled)
-interactive_mode = true  # Always use interactive mode
+VALIDATE: 1 ≤ variants ≤ 5
 ```
 
+**Stored Variables**: `style_variants`, `layout_variants`
+
+---
+
 ### Phase 3: Device Type Inference
+
+**Unified Principle**: explicit > prompt keywords > target_type > default
+
 ```bash
-# Device type inference
-device_type = "auto"
+# Device type (priority chain)
+device_type = --device-type (if != "auto")
+           OR detect_keywords(prompt_text, ["mobile", "desktop", "tablet", "responsive"])
+           OR infer_from_target(target_type)  # component→desktop, page→responsive
+           OR "responsive"
 
-# Step 1: Explicit parameter (highest priority)
-IF --device-type AND --device-type != "auto":
-    device_type = --device-type
-    device_source = "explicit"
-ELSE:
-    # Step 2: Prompt analysis
-    IF prompt_text:
-        device_keywords = {
-            "desktop": ["desktop", "web", "laptop", "widescreen", "large screen"],
-            "mobile": ["mobile", "phone", "smartphone", "ios", "android"],
-            "tablet": ["tablet", "ipad", "medium screen"],
-            "responsive": ["responsive", "adaptive", "multi-device", "cross-platform"]
-        }
-        detected_device = detect_device_from_prompt(prompt_text, device_keywords)
-        IF detected_device:
-            device_type = detected_device
-            device_source = "prompt_inference"
-
-    # Step 3: Target type inference
-    IF device_type == "auto":
-        # Components are typically desktop-first, pages can vary
-        device_type = target_type == "component" ? "desktop" : "responsive"
-        device_source = "target_type_inference"
-
-STORE: device_type, device_source
+device_source = track_detection_source()
 ```
 
-**Device Type Presets**:
-- **Desktop**: 1920×1080px - Mouse-driven, spacious layouts
-- **Mobile**: 375×812px - Touch-friendly, compact layouts
-- **Tablet**: 768×1024px - Hybrid touch/mouse layouts
-- **Responsive**: 1920×1080px base with mobile-first breakpoints
+**Detection Keywords**: mobile, phone, smartphone → mobile | desktop, web, laptop → desktop | tablet, ipad → tablet | responsive, adaptive → responsive
 
-**Detection Keywords**:
-- Prompt contains "mobile", "phone", "smartphone" → mobile
-- Prompt contains "tablet", "ipad" → tablet
-- Prompt contains "desktop", "web", "laptop" → desktop
-- Prompt contains "responsive", "adaptive" → responsive
-- Otherwise: Inferred from target type (components→desktop, pages→responsive)
+**Device Presets**: Desktop (1920×1080) | Mobile (375×812) | Tablet (768×1024) | Responsive (1920×1080 + breakpoints)
+
+**Stored Variables**: `device_type`, `device_source`
 
 ### Phase 4: Run Initialization & Directory Setup
 ```bash
 design_id = "design-run-$(date +%Y%m%d)-$RANDOM"
-relative_base_path = --session ? ".workflow/WFS-{session}/${design_id}" : ".workflow/${design_id}"
+relative_base_path = --session ? ".workflow/active/WFS-{session}/${design_id}" : ".workflow/${design_id}"
 
 # Create directory and convert to absolute path
 Bash(mkdir -p "${relative_base_path}/style-extraction")
@@ -466,13 +402,13 @@ IF design_source IN ["code_only", "hybrid"]:
 
     # Animation reuse confirmation (code import with complete animations)
     IF design_source == "code_only" AND animation_complete:
-        REPORT: "✅ 检测到完整的动画系统（来自代码导入）"
+        REPORT: "✅ Complete animation system detected (from code import)"
         REPORT: "   Duration scales: {duration_count} | Easing functions: {easing_count}"
         REPORT: ""
         REPORT: "Options:"
-        REPORT: "  • 'reuse' (默认) - 复用已有动画系统"
-        REPORT: "  • 'regenerate' - 重新生成动画系统（交互式）"
-        REPORT: "  • 'cancel' - 取消工作流"
+        REPORT: "  • 'reuse' (default) - Reuse existing animation system"
+        REPORT: "  • 'regenerate' - Regenerate animation system (interactive)"
+        REPORT: "  • 'cancel' - Cancel workflow"
         user_response = WAIT_FOR_USER_INPUT()
         MATCH user_response:
             "reuse" → skip_animation_extraction = true
@@ -580,63 +516,22 @@ REPORT: "   → Assembly tasks: {total} combinations"
 SlashCommand(command)
 
 # After executing all attached tasks, collapse them into phase summary
-# When phase finishes, IMMEDIATELY execute Phase 11 (auto-continue)
-# Output:
+# Workflow complete - generate command handles preview file generation (compare.html, PREVIEW.md)
+# Output (generated by generate command):
 # - {target}-style-{s}-layout-{l}.html (assembled prototypes)
 # - {target}-style-{s}-layout-{l}.css
-# Note: compare.html and PREVIEW.md will be generated in Phase 11
-```
-
-### Phase 11: Generate Preview Files
-```bash
-REPORT: "🚀 Phase 11: Generate Preview Files"
-
-# Update TodoWrite to reflect preview generation phase
-TodoWrite({todos: [
-  {"content": "Execute style extraction", "status": "completed", "activeForm": "Executing style extraction"},
-  {"content": "Execute animation extraction", "status": "completed", "activeForm": "Executing animation extraction"},
-  {"content": "Execute layout extraction", "status": "completed", "activeForm": "Executing layout extraction"},
-  {"content": "Execute UI assembly", "status": "completed", "activeForm": "Executing UI assembly"},
-  {"content": "Generate preview files", "status": "in_progress", "activeForm": "Generating preview files"}
-]})
-
-# Execute preview generation script
-Bash(~/.claude/scripts/ui-generate-preview.sh "${base_path}/prototypes")
-
-# Verify output files
-IF NOT exists("${base_path}/prototypes/compare.html"):
-    ERROR: "Preview generation failed: compare.html not found"
-    EXIT 1
-
-IF NOT exists("${base_path}/prototypes/PREVIEW.md"):
-    ERROR: "Preview generation failed: PREVIEW.md not found"
-    EXIT 1
-
-# Mark preview generation as complete
-TodoWrite({todos: [
-  {"content": "Execute style extraction", "status": "completed", "activeForm": "Executing style extraction"},
-  {"content": "Execute animation extraction", "status": "completed", "activeForm": "Executing animation extraction"},
-  {"content": "Execute layout extraction", "status": "completed", "activeForm": "Executing layout extraction"},
-  {"content": "Execute UI assembly", "status": "completed", "activeForm": "Executing UI assembly"},
-  {"content": "Generate preview files", "status": "completed", "activeForm": "Generating preview files"}
-]})
-
-REPORT: "✅ Preview files generated successfully"
-REPORT: "   → compare.html (interactive matrix view)"
-REPORT: "   → PREVIEW.md (usage instructions)"
-
-# Workflow complete, display final report
+# - compare.html (interactive matrix view)
+# - PREVIEW.md (usage instructions)
 ```
 
 ## TodoWrite Pattern
 ```javascript
-// Initialize IMMEDIATELY after Phase 5 user confirmation to track multi-phase execution (5 orchestrator-level tasks)
+// Initialize IMMEDIATELY after Phase 5 user confirmation to track multi-phase execution (4 orchestrator-level tasks)
 TodoWrite({todos: [
   {"content": "Execute style extraction", "status": "in_progress", "activeForm": "Executing style extraction"},
   {"content": "Execute animation extraction", "status": "pending", "activeForm": "Executing animation extraction"},
   {"content": "Execute layout extraction", "status": "pending", "activeForm": "Executing layout extraction"},
-  {"content": "Execute UI assembly", "status": "pending", "activeForm": "Executing UI assembly"},
-  {"content": "Generate preview files", "status": "pending", "activeForm": "Generating preview files"}
+  {"content": "Execute UI assembly", "status": "pending", "activeForm": "Executing UI assembly"}
 ]})
 
 // ⚠️ CRITICAL: Dynamic TodoWrite task attachment strategy:
@@ -651,18 +546,13 @@ TodoWrite({todos: [
 // 4. After all attached tasks complete, COLLAPSE them into phase summary
 // 5. Update next phase to in_progress
 // 6. IMMEDIATELY execute next phase (auto-continue)
-//
-// Phase 11 Script Execution Pattern:
-// 1. Mark "Generate preview files" as in_progress
-// 2. Execute preview generation script via Bash tool
-// 3. Verify output files (compare.html, PREVIEW.md)
-// 4. Mark "Generate preview files" as completed
+// 7. After Phase 10 completes, workflow finishes (generate command handles preview files)
 //
 // Benefits:
 // ✓ Real-time visibility into sub-command task progress
 // ✓ Clean orchestrator-level summary after each phase
 // ✓ Clear mental model: SlashCommand = attach tasks, not delegate work
-// ✓ Script execution for preview generation (no delegation)
+// ✓ Generate command handles preview generation autonomously
 // ✓ Dynamic attachment/collapse maintains clarity
 ```
 
@@ -682,7 +572,7 @@ Phase 9: {n×l} layout templates (layout-extract with multi-select)
 Phase 10: UI Assembly (generate)
   - Pure assembly: layout templates + design tokens
   - {s}×{l}×{n} = {total} final prototypes
-Phase 11: Preview files generated (compare.html, PREVIEW.md)
+  - Preview files: compare.html, PREVIEW.md (auto-generated by generate command)
 
 Assembly Process:
 ✅ Separation of Concerns: Layout (structure) + Style (tokens) kept separate

.claude/commands/workflow/ui-design/generate.md

@@ -31,7 +31,7 @@ if [ -n "$DESIGN_ID" ]; then
   relative_path=$(find .workflow -name "${DESIGN_ID}" -type d -print -quit)
 elif [ -n "$SESSION_ID" ]; then
   # Latest in session
-  relative_path=$(find .workflow/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
+  relative_path=$(find .workflow/active/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
 else
   # Latest globally
   relative_path=$(find .workflow -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)

.claude/commands/workflow/ui-design/imitate-auto.md

@@ -67,7 +67,7 @@ allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Write(*), Bash(*)
 
 **Optional Parameters**:
 - `--session <id>`: Workflow session ID
-  - Integrate into existing session (`.workflow/WFS-{session}/`)
+  - Integrate into existing session (`.workflow/active/WFS-{session}/`)
   - Enable automatic design system integration (Phase 4)
   - If not provided: standalone mode (`.workflow/`)
 
@@ -98,7 +98,7 @@ allowed-tools: SlashCommand(*), TodoWrite(*), Read(*), Write(*), Bash(*)
 **Session Integration**:
 - `--session` flag determines session integration or standalone execution
 - Integrated: Design system automatically added to session artifacts
-- Standalone: Output in `.workflow/{run_id}/`
+- Standalone: Output in `.workflow/active/{run_id}/`
 
 ## 5-Phase Execution
 
@@ -184,11 +184,11 @@ design_id = "design-run-$(date +%Y%m%d)-$RANDOM"
 
 IF --session:
     session_id = {provided_session}
-    relative_base_path = ".workflow/WFS-{session_id}/{design_id}"
+    relative_base_path = ".workflow/active/WFS-{session_id}/{design_id}"
     session_mode = "integrated"
 ELSE:
     session_id = null
-    relative_base_path = ".workflow/{design_id}"
+    relative_base_path = ".workflow/active/{design_id}"
     session_mode = "standalone"
 
 # Create base directory and convert to absolute path

.claude/commands/workflow/ui-design/import-from-code.md

@@ -61,7 +61,7 @@ if [ -n "$DESIGN_ID" ]; then
   fi
 elif [ -n "$SESSION_ID" ]; then
   # Latest in session
-  relative_path=$(find .workflow/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
+  relative_path=$(find .workflow/active/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
   if [ -z "$relative_path" ]; then
     echo "ERROR: No design run found in session: $SESSION_ID"
     echo "HINT: Create a design run first or provide --design-id"

.claude/commands/workflow/ui-design/layout-extract.md

@@ -1,7 +1,7 @@
 ---
 name: layout-extract
-description: Extract structural layout information from reference images, URLs, or text prompts using Claude analysis with variant generation or refinement mode
-argument-hint: [--design-id <id>] [--session <id>] [--images "<glob>"] [--urls "<list>"] [--prompt "<desc>"] [--targets "<list>"] [--variants <count>] [--device-type <desktop|mobile|tablet|responsive>] [--interactive] [--refine]
+description: Extract structural layout information from reference images or text prompts using Claude analysis with variant generation or refinement mode
+argument-hint: [--design-id <id>] [--session <id>] [--images "<glob>"] [--prompt "<desc>"] [--targets "<list>"] [--variants <count>] [--device-type <desktop|mobile|tablet|responsive>] [--interactive] [--refine]
 allowed-tools: TodoWrite(*), Read(*), Write(*), Glob(*), Bash(*), AskUserQuestion(*), Task(ui-design-agent), mcp__exa__web_search_exa(*)
 ---
 
@@ -9,7 +9,7 @@ allowed-tools: TodoWrite(*), Read(*), Write(*), Glob(*), Bash(*), AskUserQuestio
 
 ## Overview
 
-Extract structural layout information from reference images, URLs, or text prompts using AI analysis. Supports two modes:
+Extract structural layout information from reference images or text prompts using AI analysis. Supports two modes:
 1. **Exploration Mode** (default): Generate multiple contrasting layout variants
 2. **Refinement Mode** (`--refine`): Refine a single existing layout through detailed adjustments
 
@@ -29,23 +29,7 @@ This command separates the "scaffolding" (HTML structure and CSS layout) from th
 
 ```bash
 # Detect input source
-# Priority: --urls + --images → hybrid | --urls → url | --images → image | --prompt → text
-
-# Parse URLs if provided (format: "target:url,target:url,...")
-IF --urls:
-    url_list = []
-    FOR pair IN split(--urls, ","):
-        IF ":" IN pair:
-            target, url = pair.split(":", 1)
-            url_list.append({target: target.strip(), url: url.strip()})
-        ELSE:
-            # Single URL without target
-            url_list.append({target: "page", url: pair.strip()})
-
-    has_urls = true
-ELSE:
-    has_urls = false
-    url_list = []
+# Priority: --images → image | --prompt → text
 
 # Detect refinement mode
 refine_mode = --refine OR false
@@ -62,11 +46,9 @@ ELSE:
     REPORT: "🔍 Exploration mode: Will generate {variants_count} contrasting layout concepts per target"
 
 # Resolve targets
-# Priority: --targets → url_list targets → prompt analysis → default ["page"]
+# Priority: --targets → prompt analysis → default ["page"]
 IF --targets:
     targets = split(--targets, ",")
-ELSE IF has_urls:
-    targets = [url_info.target for url_info in url_list]
 ELSE IF --prompt:
     # Extract targets from prompt using pattern matching
     # Looks for keywords: "page names", target descriptors (login, dashboard, etc.)
@@ -84,7 +66,7 @@ if [ -n "$DESIGN_ID" ]; then
   relative_path=$(find .workflow -name "${DESIGN_ID}" -type d -print -quit)
 elif [ -n "$SESSION_ID" ]; then
   # Latest in session
-  relative_path=$(find .workflow/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
+  relative_path=$(find .workflow/active/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
 else
   # Latest globally
   relative_path=$(find .workflow -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
@@ -107,10 +89,6 @@ bash(echo "✓ Base path: $base_path")
 bash(ls {images_pattern})  # Expand glob pattern
 Read({image_path})  # Load each image
 
-# For URL mode
-# Parse URL list format: "target:url,target:url"
-# Validate URLs are accessible
-
 # For text mode
 # Validate --prompt is non-empty
 
@@ -118,97 +96,6 @@ Read({image_path})  # Load each image
 bash(mkdir -p {base_path}/layout-extraction)
 ```
 
-### Step 2.5: Extract DOM Structure (URL Mode - Auto-Trigger)
-```bash
-# AUTO-TRIGGER: If URLs are available (from --urls parameter), automatically extract real DOM structure
-# This provides accurate layout data to supplement visual analysis
-
-# Check if URLs provided via --urls parameter
-IF --urls AND url_list:
-    REPORT: "🔍 Auto-triggering URL mode: Extracting DOM structure"
-
-    bash(mkdir -p {base_path}/.intermediates/layout-analysis)
-
-    # For each URL in url_list:
-    FOR url_info IN url_list:
-        target = url_info.target
-        url = url_info.url
-
-        IF mcp_chrome_devtools_available:
-            REPORT: "   Processing: {target} ({url})"
-
-            # Read extraction script
-            script_content = Read(~/.claude/scripts/extract-layout-structure.js)
-
-            # Open page in Chrome DevTools
-            mcp__chrome-devtools__navigate_page(url=url)
-
-            # Execute layout extraction script
-            result = mcp__chrome-devtools__evaluate_script(function=script_content)
-
-            # Save DOM structure for this target (intermediate file)
-            Write({base_path}/.intermediates/layout-analysis/dom-structure-{target}.json, result)
-
-            REPORT: "   ✅ DOM structure extracted for '{target}'"
-        ELSE:
-            REPORT: "   ⚠️ Chrome DevTools MCP not available, falling back to visual analysis"
-            BREAK
-
-    dom_structure_available = mcp_chrome_devtools_available
-ELSE:
-    dom_structure_available = false
-```
-
-**Extraction Script Reference**: `~/.claude/scripts/extract-layout-structure.js`
-
-**Usage**: Read the script file and use content directly in `mcp__chrome-devtools__evaluate_script()`
-
-**Script returns**:
-- `metadata`: Extraction timestamp, URL, method, version
-- `patterns`: Layout pattern statistics (flexColumn, flexRow, grid counts)
-- `structure`: Hierarchical DOM tree with layout properties
-- `exploration`: (Optional) Progressive exploration results when standard selectors fail
-
-**Benefits**:
-- ✅ Real flex/grid configuration (justifyContent, alignItems, gap, etc.)
-- ✅ Accurate element bounds (x, y, width, height)
-- ✅ Structural hierarchy with depth control
-- ✅ Layout pattern identification (flex-row, flex-column, grid-NCol)
-- ✅ Progressive exploration: Auto-discovers missing selectors
-
-**Progressive Exploration Strategy** (v2.2.0+):
-
-When script finds <3 main containers, it automatically:
-1. **Scans** all large visible containers (≥500×300px)
-2. **Extracts** class patterns matching: `main|content|wrapper|container|page|layout|app`
-3. **Suggests** new selectors to add to script
-4. **Returns** exploration data in `result.exploration`:
-   ```json
-   {
-     "triggered": true,
-     "discoveredCandidates": [{classes, bounds, display}],
-     "suggestedSelectors": [".wrapper", ".page-index"],
-     "recommendation": ".wrapper, .page-index, .app-container"
-   }
-   ```
-
-**Using Exploration Results**:
-```javascript
-// After extraction, check for suggestions
-IF result.exploration?.triggered:
-    REPORT: result.exploration.warning
-    REPORT: "Suggested selectors: " + result.exploration.recommendation
-
-    // Update script by adding to commonClassSelectors array
-    // Then re-run extraction for better coverage
-```
-
-**Selector Update Workflow**:
-1. Run extraction on unfamiliar site
-2. Check `result.exploration.suggestedSelectors`
-3. Add relevant selectors to script's `commonClassSelectors`
-4. Re-run extraction → improved container detection
-
 ### Step 3: Memory Check
 ```bash
 # 1. Check if inputs cached in session memory
@@ -711,13 +598,6 @@ Configuration:
 - Device Type: {device_type}
 - Targets: {targets.join(", ")}
 - Total Templates: {total_tasks} ({targets.length} targets with multi-selection)
-{IF has_urls AND dom_structure_available:
-- 🔍 URL Mode: DOM structure extracted from {len(url_list)} URL(s)
-- Accuracy: Real flex/grid properties from live pages
-}
-{IF has_urls AND NOT dom_structure_available:
-- ⚠️ URL Mode: Chrome DevTools unavailable, used visual analysis fallback
-}
 
 User Selections:
 {FOR each target in targets:
@@ -734,10 +614,7 @@ Generated Templates:
 
 Intermediate Files:
 - {base_path}/.intermediates/layout-analysis/
-  ├── analysis-options.json (concept proposals + user selections embedded)
-  {IF dom_structure_available:
-  ├── dom-structure-*.json ({len(url_list)} DOM extracts)
-  }
+  └── analysis-options.json (concept proposals + user selections embedded)
 
 Next: /workflow:ui-design:generate will combine these structural templates with design systems to produce final prototypes.
 ```
@@ -867,15 +744,11 @@ ERROR: MCP search failed
 
 ## Key Features
 
-- **Auto-Trigger URL Mode** - Automatically extracts DOM structure when --urls provided (no manual flag needed)
-- **Hybrid Extraction Strategy** - Combines real DOM structure data with AI visual analysis
-- **Accurate Layout Properties** - Chrome DevTools extracts real flex/grid configurations, bounds, and hierarchy
 - **Separation of Concerns** - Decouples layout (structure) from style (visuals)
 - **Multi-Selection Workflow** - Generate N concepts → User selects multiple → Parallel template generation
 - **Structural Exploration** - Enables A/B testing of different layouts through multi-selection
 - **Token-Based Layout** - CSS uses `var()` placeholders for instant design system adaptation
 - **Device-Specific** - Tailored structures for different screen sizes
-- **Graceful Fallback** - Falls back to visual analysis if Chrome DevTools unavailable
 - **Foundation for Assembly** - Provides structural blueprint for prototype generation
 - **Agent-Powered** - Deep structural analysis with AI
 

.claude/commands/workflow/ui-design/style-extract.md

@@ -1,8 +1,8 @@
 ---
 name: style-extract
 description: Extract design style from reference images or text prompts using Claude analysis with variant generation or refinement mode
-argument-hint: "[--design-id <id>] [--session <id>] [--images "<glob>"] [--urls "<list>"] [--prompt "<desc>"] [--variants <count>] [--interactive] [--refine]"
-allowed-tools: TodoWrite(*), Read(*), Write(*), Glob(*), AskUserQuestion(*), mcp__chrome-devtools__navigate_page(*), mcp__chrome-devtools__evaluate_script(*)
+argument-hint: "[--design-id <id>] [--session <id>] [--images "<glob>"] [--prompt "<desc>"] [--variants <count>] [--interactive] [--refine]"
+allowed-tools: TodoWrite(*), Read(*), Write(*), Glob(*), AskUserQuestion(*)
 ---
 
 # Style Extraction Command
@@ -24,23 +24,7 @@ Extract design style from reference images or text prompts using Claude's built-
 ### Step 1: Detect Input Mode, Extraction Mode & Base Path
 ```bash
 # Detect input source
-# Priority: --urls + --images + --prompt → hybrid-url | --urls + --images → url-image | --urls → url | --images + --prompt → hybrid | --images → image | --prompt → text
-
-# Parse URLs if provided (format: "target:url,target:url,...")
-IF --urls:
-    url_list = []
-    FOR pair IN split(--urls, ","):
-        IF ":" IN pair:
-            target, url = pair.split(":", 1)
-            url_list.append({target: target.strip(), url: url.strip()})
-        ELSE:
-            # Single URL without target
-            url_list.append({target: "page", url: pair.strip()})
-
-    has_urls = true
-    primary_url = url_list[0].url  # First URL as primary source
-ELSE:
-    has_urls = false
+# Priority: --images + --prompt → hybrid | --images → image | --prompt → text
 
 # Detect refinement mode
 refine_mode = --refine OR false
@@ -62,7 +46,7 @@ if [ -n "$DESIGN_ID" ]; then
   relative_path=$(find .workflow -name "${DESIGN_ID}" -type d -print -quit)
 elif [ -n "$SESSION_ID" ]; then
   # Latest in session
-  relative_path=$(find .workflow/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
+  relative_path=$(find .workflow/active/WFS-$SESSION_ID -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
 else
   # Latest globally
   relative_path=$(find .workflow -name "design-run-*" -type d -printf "%T@ %p\n" 2>/dev/null | sort -nr | head -1 | cut -d' ' -f2)
@@ -79,64 +63,7 @@ base_path=$(cd "$relative_path" && pwd)
 bash(echo "✓ Base path: $base_path")
 ```
 
-### Step 2: Extract Computed Styles (URL Mode - Auto-Trigger)
-```bash
-# AUTO-TRIGGER: If URLs are available (from --urls parameter or capture metadata), automatically extract real CSS values
-# This provides accurate design tokens to supplement visual analysis
-
-# Priority 1: Check for --urls parameter
-IF has_urls:
-    url_to_extract = primary_url
-    url_source = "--urls parameter"
-
-# Priority 2: Check for URL metadata from capture phase
-ELSE IF exists({base_path}/.metadata/capture-urls.json):
-    capture_urls = Read({base_path}/.metadata/capture-urls.json)
-    url_to_extract = capture_urls[0]  # Use first URL
-    url_source = "capture metadata"
-ELSE:
-    url_to_extract = null
-
-# Execute extraction if URL available
-IF url_to_extract AND mcp_chrome_devtools_available:
-    REPORT: "🔍 Auto-triggering URL mode: Extracting computed styles from {url_source}"
-    REPORT: "   URL: {url_to_extract}"
-
-    # Read extraction script
-    script_content = Read(~/.claude/scripts/extract-computed-styles.js)
-
-    # Open page in Chrome DevTools
-    mcp__chrome-devtools__navigate_page(url=url_to_extract)
-
-    # Execute extraction script directly
-    result = mcp__chrome-devtools__evaluate_script(function=script_content)
-
-    # Save computed styles to intermediates directory
-    bash(mkdir -p {base_path}/.intermediates/style-analysis)
-    Write({base_path}/.intermediates/style-analysis/computed-styles.json, result)
-
-    computed_styles_available = true
-    REPORT: "   ✅ Computed styles extracted and saved"
-ELSE:
-    computed_styles_available = false
-    IF url_to_extract:
-        REPORT: "⚠️ Chrome DevTools MCP not available, falling back to visual analysis"
-```
-
-**Extraction Script Reference**: `~/.claude/scripts/extract-computed-styles.js`
-
-**Usage**: Read the script file and use content directly in `mcp__chrome-devtools__evaluate_script()`
-
-**Script returns**:
-- `metadata`: Extraction timestamp, URL, method
-- `tokens`: Organized design tokens (colors, borderRadii, shadows, fontSizes, fontWeights, spacing)
-
-**Benefits**:
-- ✅ Pixel-perfect accuracy for border-radius, box-shadow, padding, etc.
-- ✅ Eliminates guessing from visual analysis
-- ✅ Provides ground truth for design tokens
-
-### Step 3: Load Inputs
+### Step 2: Load Inputs
 ```bash
 # For image mode
 bash(ls {images_pattern})  # Expand glob pattern
@@ -161,7 +88,7 @@ IF exists: SKIP to completion
 
 ---
 
-**Phase 0 Output**: `input_mode`, `base_path`, `extraction_mode`, `variants_count`, `loaded_images[]` or `prompt_guidance`, `has_urls`, `url_list[]`, `computed_styles_available`
+**Phase 0 Output**: `input_mode`, `base_path`, `extraction_mode`, `variants_count`, `loaded_images[]` or `prompt_guidance`
 
 ## Phase 1: Design Direction or Refinement Options Generation
 
@@ -571,9 +498,8 @@ FOR variant_index IN 1..actual_variants_count:
       - Preview Border Radius: ${selected_direction.preview.border_radius_base}
 
       ## Input Analysis
-      - Input mode: {input_mode} (image/text/hybrid${has_urls ? "/url" : ""})
+      - Input mode: {input_mode} (image/text/hybrid)
       - Visual references: {loaded_images OR prompt_guidance}
-      ${computed_styles_available ? "- Computed styles: Use as ground truth (Read from .intermediates/style-analysis/computed-styles.json)" : ""}
 
       ## Generation Rules
       - Develop the selected design direction into a complete design system
@@ -587,7 +513,7 @@ FOR variant_index IN 1..actual_variants_count:
         * innovation → token naming, experimental values
       - Honor search_keywords for design inspiration
       - Avoid anti_keywords patterns
-      - All colors in OKLCH format ${computed_styles_available ? "(convert from computed RGB)" : ""}
+      - All colors in OKLCH format
       - WCAG AA compliance: 4.5:1 text contrast, 3:1 UI contrast
 
       ## Generate
@@ -656,16 +582,9 @@ TodoWrite({todos: [
 Configuration:
 - Session: {session_id}
 - Extraction Mode: {extraction_mode} (imitate/explore)
-- Input Mode: {input_mode} (image/text/hybrid{"/url" if has_urls else ""})
+- Input Mode: {input_mode} (image/text/hybrid)
 - Variants: {variants_count}
 - Production-Ready: Complete design systems generated
-{IF has_urls AND computed_styles_available:
-- 🔍 URL Mode: Computed styles extracted from {len(url_list)} URL(s)
-- Accuracy: Pixel-perfect design tokens from DOM
-}
-{IF has_urls AND NOT computed_styles_available:
-- ⚠️ URL Mode: Chrome DevTools unavailable, used visual analysis fallback
-}
 
 {IF extraction_mode == "explore":
 Design Direction Selection:
@@ -676,11 +595,6 @@ Design Direction Selection:
 Generated Files:
 {base_path}/style-extraction/
 └── style-1/design-tokens.json
-
-{IF computed_styles_available:
-Intermediate Analysis:
-{base_path}/.intermediates/style-analysis/computed-styles.json (extracted from {primary_url})
-}
 {IF extraction_mode == "explore":
 {base_path}/.intermediates/style-analysis/analysis-options.json (design direction options + user selection)
 }
@@ -811,15 +725,11 @@ ERROR: Claude JSON parsing error
 
 ## Key Features
 
-- **Auto-Trigger URL Mode** - Automatically extracts computed styles when --urls provided (no manual flag needed)
 - **Direct Design System Generation** - Complete design-tokens.json + style-guide.md in one step
-- **Hybrid Extraction Strategy** - Combines computed CSS values (ground truth) with AI visual analysis
-- **Pixel-Perfect Accuracy** - Chrome DevTools extracts exact border-radius, shadows, spacing values
 - **AI-Driven Design Space Exploration** - 6D attribute space analysis for maximum contrast
 - **Variant-Specific Directions** - Each variant has unique philosophy, keywords, anti-patterns
 - **Maximum Contrast Guarantee** - Variants maximally distant in attribute space
-- **Flexible Input** - Images, text, URLs, or hybrid mode
-- **Graceful Fallback** - Falls back to pure visual inference if Chrome DevTools unavailable
+- **Flexible Input** - Images, text, or hybrid mode
 - **Production-Ready** - OKLCH colors, WCAG AA compliance, semantic naming
 - **Agent-Driven** - Autonomous multi-file generation with ui-design-agent
 

.claude/scripts/generate_module_docs.sh

@@ -0,0 +1,713 @@
+#!/bin/bash
+# Generate documentation for modules and projects with multiple strategies
+# Usage: generate_module_docs.sh <strategy> <source_path> <project_name> [tool] [model]
+#   strategy: full|single|project-readme|project-architecture|http-api
+#   source_path: Path to the source module directory (or project root for project-level docs)
+#   project_name: Project name for output path (e.g., "myproject")
+#   tool: gemini|qwen|codex (default: gemini)
+#   model: Model name (optional, uses tool defaults)
+#
+# Default Models:
+#   gemini: gemini-2.5-flash
+#   qwen: coder-model
+#   codex: gpt5-codex
+#
+# Module-Level Strategies:
+#   full: Full documentation generation
+#     - Read: All files in current and subdirectories (@**/*)
+#     - Generate: API.md + README.md for each directory containing code files
+#     - Use: Deep directories (Layer 3), comprehensive documentation
+#
+#   single: Single-layer documentation
+#     - Read: Current directory code + child API.md/README.md files
+#     - Generate: API.md + README.md only in current directory
+#     - Use: Upper layers (Layer 1-2), incremental updates
+#
+# Project-Level Strategies:
+#   project-readme: Project overview documentation
+#     - Read: All module API.md and README.md files
+#     - Generate: README.md (project root)
+#     - Use: After all module docs are generated
+#
+#   project-architecture: System design documentation
+#     - Read: All module docs + project README
+#     - Generate: ARCHITECTURE.md + EXAMPLES.md
+#     - Use: After project README is generated
+#
+#   http-api: HTTP API documentation
+#     - Read: API route files + existing docs
+#     - Generate: api/README.md
+#     - Use: For projects with HTTP APIs
+#
+# Output Structure:
+#   Module docs: .workflow/docs/{project_name}/{source_path}/API.md
+#   Module docs: .workflow/docs/{project_name}/{source_path}/README.md
+#   Project docs: .workflow/docs/{project_name}/README.md
+#   Project docs: .workflow/docs/{project_name}/ARCHITECTURE.md
+#   Project docs: .workflow/docs/{project_name}/EXAMPLES.md
+#   API docs: .workflow/docs/{project_name}/api/README.md
+#
+# Features:
+#   - Path mirroring: source structure → docs structure
+#   - Template-driven generation
+#   - Respects .gitignore patterns
+#   - Detects code vs navigation folders
+#   - Tool fallback support
+
+# Build exclusion filters from .gitignore
+build_exclusion_filters() {
+    local filters=""
+
+    # Common system/cache directories to exclude
+    local system_excludes=(
+        ".git" "__pycache__" "node_modules" ".venv" "venv" "env"
+        "dist" "build" ".cache" ".pytest_cache" ".mypy_cache"
+        "coverage" ".nyc_output" "logs" "tmp" "temp" ".workflow"
+    )
+
+    for exclude in "${system_excludes[@]}"; do
+        filters+=" -not -path '*/$exclude' -not -path '*/$exclude/*'"
+    done
+
+    # Find and parse .gitignore (current dir first, then git root)
+    local gitignore_file=""
+
+    # Check current directory first
+    if [ -f ".gitignore" ]; then
+        gitignore_file=".gitignore"
+    else
+        # Try to find git root and check for .gitignore there
+        local git_root=$(git rev-parse --show-toplevel 2>/dev/null)
+        if [ -n "$git_root" ] && [ -f "$git_root/.gitignore" ]; then
+            gitignore_file="$git_root/.gitignore"
+        fi
+    fi
+
+    # Parse .gitignore if found
+    if [ -n "$gitignore_file" ]; then
+        while IFS= read -r line; do
+            # Skip empty lines and comments
+            [[ -z "$line" || "$line" =~ ^[[:space:]]*# ]] && continue
+
+            # Remove trailing slash and whitespace
+            line=$(echo "$line" | sed 's|/$||' | xargs)
+
+            # Skip wildcards patterns (too complex for simple find)
+            [[ "$line" =~ \* ]] && continue
+
+            # Add to filters
+            filters+=" -not -path '*/$line' -not -path '*/$line/*'"
+        done < "$gitignore_file"
+    fi
+
+    echo "$filters"
+}
+
+# Detect folder type (code vs navigation)
+detect_folder_type() {
+    local target_path="$1"
+    local exclusion_filters="$2"
+
+    # Count code files (primary indicators)
+    local code_count=$(eval "find \"$target_path\" -maxdepth 1 -type f \\( -name '*.ts' -o -name '*.tsx' -o -name '*.js' -o -name '*.jsx' -o -name '*.py' -o -name '*.sh' -o -name '*.go' -o -name '*.rs' \\) $exclusion_filters 2>/dev/null" | wc -l)
+
+    if [ $code_count -gt 0 ]; then
+        echo "code"
+    else
+        echo "navigation"
+    fi
+}
+
+# Scan directory structure and generate structured information
+scan_directory_structure() {
+    local target_path="$1"
+    local strategy="$2"
+
+    if [ ! -d "$target_path" ]; then
+        echo "Directory not found: $target_path"
+        return 1
+    fi
+
+    local exclusion_filters=$(build_exclusion_filters)
+    local structure_info=""
+
+    # Get basic directory info
+    local dir_name=$(basename "$target_path")
+    local total_files=$(eval "find \"$target_path\" -type f $exclusion_filters 2>/dev/null" | wc -l)
+    local total_dirs=$(eval "find \"$target_path\" -type d $exclusion_filters 2>/dev/null" | wc -l)
+    local folder_type=$(detect_folder_type "$target_path" "$exclusion_filters")
+
+    structure_info+="Directory: $dir_name\n"
+    structure_info+="Total files: $total_files\n"
+    structure_info+="Total directories: $total_dirs\n"
+    structure_info+="Folder type: $folder_type\n\n"
+
+    if [ "$strategy" = "full" ]; then
+        # For full: show all subdirectories with file counts
+        structure_info+="Subdirectories with files:\n"
+        while IFS= read -r dir; do
+            if [ -n "$dir" ] && [ "$dir" != "$target_path" ]; then
+                local rel_path=${dir#$target_path/}
+                local file_count=$(eval "find \"$dir\" -maxdepth 1 -type f $exclusion_filters 2>/dev/null" | wc -l)
+                if [ $file_count -gt 0 ]; then
+                    local subdir_type=$(detect_folder_type "$dir" "$exclusion_filters")
+                    structure_info+="  - $rel_path/ ($file_count files, type: $subdir_type)\n"
+                fi
+            fi
+        done < <(eval "find \"$target_path\" -type d $exclusion_filters 2>/dev/null")
+    else
+        # For single: show direct children only
+        structure_info+="Direct subdirectories:\n"
+        while IFS= read -r dir; do
+            if [ -n "$dir" ]; then
+                local dir_name=$(basename "$dir")
+                local file_count=$(eval "find \"$dir\" -maxdepth 1 -type f $exclusion_filters 2>/dev/null" | wc -l)
+                local has_api=$([ -f "$dir/API.md" ] && echo " [has API.md]" || echo "")
+                local has_readme=$([ -f "$dir/README.md" ] && echo " [has README.md]" || echo "")
+                structure_info+="  - $dir_name/ ($file_count files)$has_api$has_readme\n"
+            fi
+        done < <(eval "find \"$target_path\" -maxdepth 1 -type d $exclusion_filters 2>/dev/null" | grep -v "^$target_path$")
+    fi
+
+    # Show main file types in current directory
+    structure_info+="\nCurrent directory files:\n"
+    local code_files=$(eval "find \"$target_path\" -maxdepth 1 -type f \\( -name '*.ts' -o -name '*.tsx' -o -name '*.js' -o -name '*.jsx' -o -name '*.py' -o -name '*.sh' -o -name '*.go' -o -name '*.rs' \\) $exclusion_filters 2>/dev/null" | wc -l)
+    local config_files=$(eval "find \"$target_path\" -maxdepth 1 -type f \\( -name '*.json' -o -name '*.yaml' -o -name '*.yml' -o -name '*.toml' \\) $exclusion_filters 2>/dev/null" | wc -l)
+    local doc_files=$(eval "find \"$target_path\" -maxdepth 1 -type f -name '*.md' $exclusion_filters 2>/dev/null" | wc -l)
+
+    structure_info+="  - Code files: $code_files\n"
+    structure_info+="  - Config files: $config_files\n"
+    structure_info+="  - Documentation: $doc_files\n"
+
+    printf "%b" "$structure_info"
+}
+
+# Calculate output path based on source path and project name
+calculate_output_path() {
+    local source_path="$1"
+    local project_name="$2"
+    local project_root="$3"
+
+    # Get absolute path of source (normalize to Unix-style path)
+    local abs_source=$(cd "$source_path" && pwd)
+
+    # Normalize project root to same format
+    local norm_project_root=$(cd "$project_root" && pwd)
+
+    # Calculate relative path from project root
+    local rel_path="${abs_source#$norm_project_root}"
+
+    # Remove leading slash if present
+    rel_path="${rel_path#/}"
+
+    # If source is project root, use project name directly
+    if [ "$abs_source" = "$norm_project_root" ] || [ -z "$rel_path" ]; then
+        echo "$norm_project_root/.workflow/docs/$project_name"
+    else
+        echo "$norm_project_root/.workflow/docs/$project_name/$rel_path"
+    fi
+}
+
+generate_module_docs() {
+    local strategy="$1"
+    local source_path="$2"
+    local project_name="$3"
+    local tool="${4:-gemini}"
+    local model="$5"
+
+    # Validate parameters
+    if [ -z "$strategy" ] || [ -z "$source_path" ] || [ -z "$project_name" ]; then
+        echo "❌ Error: Strategy, source path, and project name are required"
+        echo "Usage: generate_module_docs.sh <strategy> <source_path> <project_name> [tool] [model]"
+        echo "Module strategies: full, single"
+        echo "Project strategies: project-readme, project-architecture, http-api"
+        return 1
+    fi
+
+    # Validate strategy
+    local valid_strategies=("full" "single" "project-readme" "project-architecture" "http-api")
+    local strategy_valid=false
+    for valid_strategy in "${valid_strategies[@]}"; do
+        if [ "$strategy" = "$valid_strategy" ]; then
+            strategy_valid=true
+            break
+        fi
+    done
+
+    if [ "$strategy_valid" = false ]; then
+        echo "❌ Error: Invalid strategy '$strategy'"
+        echo "Valid module strategies: full, single"
+        echo "Valid project strategies: project-readme, project-architecture, http-api"
+        return 1
+    fi
+
+    if [ ! -d "$source_path" ]; then
+        echo "❌ Error: Source directory '$source_path' does not exist"
+        return 1
+    fi
+
+    # Set default models if not specified
+    if [ -z "$model" ]; then
+        case "$tool" in
+            gemini)
+                model="gemini-2.5-flash"
+                ;;
+            qwen)
+                model="coder-model"
+                ;;
+            codex)
+                model="gpt5-codex"
+                ;;
+            *)
+                model=""
+                ;;
+        esac
+    fi
+
+    # Build exclusion filters
+    local exclusion_filters=$(build_exclusion_filters)
+
+    # Get project root
+    local project_root=$(git rev-parse --show-toplevel 2>/dev/null || pwd)
+
+    # Determine if this is a project-level strategy
+    local is_project_level=false
+    if [[ "$strategy" =~ ^project- ]] || [ "$strategy" = "http-api" ]; then
+        is_project_level=true
+    fi
+
+    # Calculate output path
+    local output_path
+    if [ "$is_project_level" = true ]; then
+        # Project-level docs go to project root
+        if [ "$strategy" = "http-api" ]; then
+            output_path="$project_root/.workflow/docs/$project_name/api"
+        else
+            output_path="$project_root/.workflow/docs/$project_name"
+        fi
+    else
+        output_path=$(calculate_output_path "$source_path" "$project_name" "$project_root")
+    fi
+
+    # Create output directory
+    mkdir -p "$output_path"
+
+    # Detect folder type (only for module-level strategies)
+    local folder_type=""
+    if [ "$is_project_level" = false ]; then
+        folder_type=$(detect_folder_type "$source_path" "$exclusion_filters")
+    fi
+
+    # Load templates based on strategy
+    local api_template=""
+    local readme_template=""
+    local template_content=""
+
+    if [ "$is_project_level" = true ]; then
+        # Project-level templates
+        case "$strategy" in
+            project-readme)
+                local proj_readme_path="$HOME/.claude/workflows/cli-templates/prompts/documentation/project-readme.txt"
+                if [ -f "$proj_readme_path" ]; then
+                    template_content=$(cat "$proj_readme_path")
+                    echo "   📋 Loaded Project README template: $(wc -l < "$proj_readme_path") lines"
+                fi
+                ;;
+            project-architecture)
+                local arch_path="$HOME/.claude/workflows/cli-templates/prompts/documentation/project-architecture.txt"
+                local examples_path="$HOME/.claude/workflows/cli-templates/prompts/documentation/project-examples.txt"
+                if [ -f "$arch_path" ]; then
+                    template_content=$(cat "$arch_path")
+                    echo "   📋 Loaded Architecture template: $(wc -l < "$arch_path") lines"
+                fi
+                if [ -f "$examples_path" ]; then
+                    template_content="$template_content
+
+EXAMPLES TEMPLATE:
+$(cat "$examples_path")"
+                    echo "   📋 Loaded Examples template: $(wc -l < "$examples_path") lines"
+                fi
+                ;;
+            http-api)
+                local api_path="$HOME/.claude/workflows/cli-templates/prompts/documentation/api.txt"
+                if [ -f "$api_path" ]; then
+                    template_content=$(cat "$api_path")
+                    echo "   📋 Loaded HTTP API template: $(wc -l < "$api_path") lines"
+                fi
+                ;;
+        esac
+    else
+        # Module-level templates
+        local api_template_path="$HOME/.claude/workflows/cli-templates/prompts/documentation/api.txt"
+        local readme_template_path="$HOME/.claude/workflows/cli-templates/prompts/documentation/module-readme.txt"
+        local nav_template_path="$HOME/.claude/workflows/cli-templates/prompts/documentation/folder-navigation.txt"
+
+        if [ "$folder_type" = "code" ]; then
+            if [ -f "$api_template_path" ]; then
+                api_template=$(cat "$api_template_path")
+                echo "   📋 Loaded API template: $(wc -l < "$api_template_path") lines"
+            fi
+            if [ -f "$readme_template_path" ]; then
+                readme_template=$(cat "$readme_template_path")
+                echo "   📋 Loaded README template: $(wc -l < "$readme_template_path") lines"
+            fi
+        else
+            # Navigation folder uses navigation template
+            if [ -f "$nav_template_path" ]; then
+                readme_template=$(cat "$nav_template_path")
+                echo "   📋 Loaded Navigation template: $(wc -l < "$nav_template_path") lines"
+            fi
+        fi
+    fi
+
+    # Scan directory structure (only for module-level strategies)
+    local structure_info=""
+    if [ "$is_project_level" = false ]; then
+        echo "   🔍 Scanning directory structure..."
+        structure_info=$(scan_directory_structure "$source_path" "$strategy")
+    fi
+
+    # Prepare logging info
+    local module_name=$(basename "$source_path")
+
+    echo "⚡ Generating docs: $source_path → $output_path"
+    echo "   Strategy: $strategy | Tool: $tool | Model: $model | Type: $folder_type"
+    echo "   Output: $output_path"
+
+    # Build strategy-specific prompt
+    local final_prompt=""
+
+    # Project-level strategies
+    if [ "$strategy" = "project-readme" ]; then
+        final_prompt="PURPOSE: Generate comprehensive project overview documentation
+
+PROJECT: $project_name
+OUTPUT: Current directory (file will be moved to final location)
+
+Read: @.workflow/docs/$project_name/**/*.md
+
+Context: All module documentation files from the project
+
+Generate ONE documentation file in current directory:
+- README.md - Project root documentation
+
+Template:
+$template_content
+
+Instructions:
+- Create README.md in CURRENT DIRECTORY
+- Synthesize information from all module docs
+- Include project overview, getting started, and navigation
+- Create clear module navigation with links
+- Follow template structure exactly"
+
+    elif [ "$strategy" = "project-architecture" ]; then
+        final_prompt="PURPOSE: Generate system design and usage examples documentation
+
+PROJECT: $project_name
+OUTPUT: Current directory (files will be moved to final location)
+
+Read: @.workflow/docs/$project_name/**/*.md
+
+Context: All project documentation including module docs and project README
+
+Generate TWO documentation files in current directory:
+1. ARCHITECTURE.md - System architecture and design patterns
+2. EXAMPLES.md - End-to-end usage examples
+
+Template:
+$template_content
+
+Instructions:
+- Create both ARCHITECTURE.md and EXAMPLES.md in CURRENT DIRECTORY
+- Synthesize architectural patterns from module documentation
+- Document system structure, module relationships, and design decisions
+- Provide practical code examples and usage scenarios
+- Follow template structure for both files"
+
+    elif [ "$strategy" = "http-api" ]; then
+        final_prompt="PURPOSE: Generate HTTP API reference documentation
+
+PROJECT: $project_name
+OUTPUT: Current directory (file will be moved to final location)
+
+Read: @**/*.{ts,js,py,go,rs} @.workflow/docs/$project_name/**/*.md
+
+Context: API route files and existing documentation
+
+Generate ONE documentation file in current directory:
+- README.md - HTTP API documentation (in api/ subdirectory)
+
+Template:
+$template_content
+
+Instructions:
+- Create README.md in CURRENT DIRECTORY
+- Document all HTTP endpoints (routes, methods, parameters, responses)
+- Include authentication requirements and error codes
+- Provide request/response examples
+- Follow template structure (Part B: HTTP API documentation)"
+
+    # Module-level strategies
+    elif [ "$strategy" = "full" ]; then
+        # Full strategy: read all files, generate for each directory
+        if [ "$folder_type" = "code" ]; then
+            final_prompt="PURPOSE: Generate comprehensive API and module documentation
+
+Directory Structure Analysis:
+$structure_info
+
+SOURCE: $source_path
+OUTPUT: Current directory (files will be moved to final location)
+
+Read: @**/*
+
+Generate TWO documentation files in current directory:
+1. API.md - Code API documentation (functions, classes, interfaces)
+   Template:
+$api_template
+
+2. README.md - Module overview documentation
+   Template:
+$readme_template
+
+Instructions:
+- Generate both API.md and README.md in CURRENT DIRECTORY
+- If subdirectories contain code files, generate their docs too (recursive)
+- Work bottom-up: deepest directories first
+- Follow template structure exactly
+- Use structure analysis for context"
+        else
+            # Navigation folder - README only
+            final_prompt="PURPOSE: Generate navigation documentation for folder structure
+
+Directory Structure Analysis:
+$structure_info
+
+SOURCE: $source_path
+OUTPUT: Current directory (file will be moved to final location)
+
+Read: @**/*
+
+Generate ONE documentation file in current directory:
+- README.md - Navigation and folder overview
+
+Template:
+$readme_template
+
+Instructions:
+- Create README.md in CURRENT DIRECTORY
+- Focus on folder structure and navigation
+- Link to subdirectory documentation
+- Use structure analysis for context"
+        fi
+    else
+        # Single strategy: read current + child docs only
+        if [ "$folder_type" = "code" ]; then
+            final_prompt="PURPOSE: Generate API and module documentation for current directory
+
+Directory Structure Analysis:
+$structure_info
+
+SOURCE: $source_path
+OUTPUT: Current directory (files will be moved to final location)
+
+Read: @*/API.md @*/README.md @*.ts @*.tsx @*.js @*.jsx @*.py @*.sh @*.go @*.rs @*.md @*.json @*.yaml @*.yml
+
+Generate TWO documentation files in current directory:
+1. API.md - Code API documentation
+   Template:
+$api_template
+
+2. README.md - Module overview
+   Template:
+$readme_template
+
+Instructions:
+- Generate both API.md and README.md in CURRENT DIRECTORY
+- Reference child documentation, do not duplicate
+- Follow template structure
+- Use structure analysis for current directory context"
+        else
+            # Navigation folder - README only
+            final_prompt="PURPOSE: Generate navigation documentation
+
+Directory Structure Analysis:
+$structure_info
+
+SOURCE: $source_path
+OUTPUT: Current directory (file will be moved to final location)
+
+Read: @*/API.md @*/README.md @*.md
+
+Generate ONE documentation file in current directory:
+- README.md - Navigation and overview
+
+Template:
+$readme_template
+
+Instructions:
+- Create README.md in CURRENT DIRECTORY
+- Link to child documentation
+- Use structure analysis for navigation context"
+        fi
+    fi
+
+    # Execute documentation generation
+    local start_time=$(date +%s)
+    echo "   🔄 Starting documentation generation..."
+
+    if cd "$source_path" 2>/dev/null; then
+        local tool_result=0
+
+        # Store current output path for CLI context
+        export DOC_OUTPUT_PATH="$output_path"
+
+        # Record git HEAD before CLI execution (to detect unwanted auto-commits)
+        local git_head_before=""
+        if git rev-parse --git-dir >/dev/null 2>&1; then
+            git_head_before=$(git rev-parse HEAD 2>/dev/null)
+        fi
+
+        # Execute with selected tool
+        case "$tool" in
+            qwen)
+                if [ "$model" = "coder-model" ]; then
+                    qwen -p "$final_prompt" --yolo 2>&1
+                else
+                    qwen -p "$final_prompt" -m "$model" --yolo 2>&1
+                fi
+                tool_result=$?
+                ;;
+            codex)
+                codex --full-auto exec "$final_prompt" -m "$model" --skip-git-repo-check -s danger-full-access 2>&1
+                tool_result=$?
+                ;;
+            gemini)
+                gemini -p "$final_prompt" -m "$model" --yolo 2>&1
+                tool_result=$?
+                ;;
+            *)
+                echo "   ⚠️  Unknown tool: $tool, defaulting to gemini"
+                gemini -p "$final_prompt" -m "$model" --yolo 2>&1
+                tool_result=$?
+                ;;
+        esac
+
+        # Move generated files to output directory
+        local docs_created=0
+        local moved_files=""
+
+        if [ $tool_result -eq 0 ]; then
+            if [ "$is_project_level" = true ]; then
+                # Project-level documentation files
+                case "$strategy" in
+                    project-readme)
+                        if [ -f "README.md" ]; then
+                            mv "README.md" "$output_path/README.md" 2>/dev/null && {
+                                docs_created=$((docs_created + 1))
+                                moved_files+="README.md "
+                            }
+                        fi
+                        ;;
+                    project-architecture)
+                        if [ -f "ARCHITECTURE.md" ]; then
+                            mv "ARCHITECTURE.md" "$output_path/ARCHITECTURE.md" 2>/dev/null && {
+                                docs_created=$((docs_created + 1))
+                                moved_files+="ARCHITECTURE.md "
+                            }
+                        fi
+                        if [ -f "EXAMPLES.md" ]; then
+                            mv "EXAMPLES.md" "$output_path/EXAMPLES.md" 2>/dev/null && {
+                                docs_created=$((docs_created + 1))
+                                moved_files+="EXAMPLES.md "
+                            }
+                        fi
+                        ;;
+                    http-api)
+                        if [ -f "README.md" ]; then
+                            mv "README.md" "$output_path/README.md" 2>/dev/null && {
+                                docs_created=$((docs_created + 1))
+                                moved_files+="api/README.md "
+                            }
+                        fi
+                        ;;
+                esac
+            else
+                # Module-level documentation files
+                # Check and move API.md if it exists
+                if [ "$folder_type" = "code" ] && [ -f "API.md" ]; then
+                    mv "API.md" "$output_path/API.md" 2>/dev/null && {
+                        docs_created=$((docs_created + 1))
+                        moved_files+="API.md "
+                    }
+                fi
+
+                # Check and move README.md if it exists
+                if [ -f "README.md" ]; then
+                    mv "README.md" "$output_path/README.md" 2>/dev/null && {
+                        docs_created=$((docs_created + 1))
+                        moved_files+="README.md "
+                    }
+                fi
+            fi
+        fi
+
+        # Check if CLI tool auto-committed (and revert if needed)
+        if [ -n "$git_head_before" ]; then
+            local git_head_after=$(git rev-parse HEAD 2>/dev/null)
+            if [ "$git_head_before" != "$git_head_after" ]; then
+                echo "   ⚠️  Detected unwanted auto-commit by CLI tool, reverting..."
+                git reset --soft "$git_head_before" 2>/dev/null
+                echo "   ✅ Auto-commit reverted (files remain staged)"
+            fi
+        fi
+
+        if [ $docs_created -gt 0 ]; then
+            local end_time=$(date +%s)
+            local duration=$((end_time - start_time))
+            echo "   ✅ Generated $docs_created doc(s) in ${duration}s: $moved_files"
+            cd - > /dev/null
+            return 0
+        else
+            echo "   ❌ Documentation generation failed for $source_path"
+            cd - > /dev/null
+            return 1
+        fi
+    else
+        echo "   ❌ Cannot access directory: $source_path"
+        return 1
+    fi
+}
+
+# Execute function if script is run directly
+if [[ "${BASH_SOURCE[0]}" == "${0}" ]]; then
+    # Show help if no arguments or help requested
+    if [ $# -eq 0 ] || [ "$1" = "-h" ] || [ "$1" = "--help" ]; then
+        echo "Usage: generate_module_docs.sh <strategy> <source_path> <project_name> [tool] [model]"
+        echo ""
+        echo "Module-Level Strategies:"
+        echo "  full                   - Generate docs for all subdirectories with code"
+        echo "  single                 - Generate docs only for current directory"
+        echo ""
+        echo "Project-Level Strategies:"
+        echo "  project-readme         - Generate project root README.md"
+        echo "  project-architecture   - Generate ARCHITECTURE.md + EXAMPLES.md"
+        echo "  http-api               - Generate HTTP API documentation (api/README.md)"
+        echo ""
+        echo "Tools: gemini (default), qwen, codex"
+        echo "Models: Use tool defaults if not specified"
+        echo ""
+        echo "Module Examples:"
+        echo "  ./generate_module_docs.sh full ./src/auth myproject"
+        echo "  ./generate_module_docs.sh single ./components myproject gemini"
+        echo ""
+        echo "Project Examples:"
+        echo "  ./generate_module_docs.sh project-readme . myproject"
+        echo "  ./generate_module_docs.sh project-architecture . myproject qwen"
+        echo "  ./generate_module_docs.sh http-api . myproject"
+        exit 0
+    fi
+
+    generate_module_docs "$@"
+fi

.claude/skills/command-guide/guides/ui-design-workflow-guide.md

@@ -11,7 +11,7 @@ The UI Design Workflow System is a comprehensive suite of 11 autonomous commands
 These commands automate end-to-end processes by chaining specialized sub-commands.
 
 - **`/workflow:ui-design:explore-auto`**: For creating *new* designs. Generates multiple style and layout variants from a prompt to explore design directions.
-- **`/workflow:ui-design:imitate-auto`**: For *replicating* existing designs. High-fidelity cloning of target URLs into a reusable design system.
+- **`/workflow:ui-design:imitate-auto`**: For *replicating* existing designs. Creates design systems from local reference files (images, code) or text prompts.
 
 ### 2. Core Extractors (Specialized Analysis)
 
@@ -98,31 +98,35 @@ Tools for combining components and integrating results.
 
 ### Workflow B: Design Replication (Imitation)
 
-**Goal:** Create a design system and prototypes based on existing reference sites.
+**Goal:** Create a design system and prototypes based on existing local references.
 
 **Primary Command:** `imitate-auto`
 
 **Steps:**
 
-1. **Initiate**: User runs `/workflow:ui-design:imitate-auto --url-map "home:https://example.com, pricing:https://example.com/pricing"`
-2. **Capture**: System screenshots all provided URLs.
-3. **Extraction**: System extracts a unified design system (style, layout, animation) from the primary URL.
-4. **Assembly**: System recreates all target pages using the extracted system.
+1. **Initiate**: User runs `/workflow:ui-design:imitate-auto --input "design-refs/*.png"` with local reference files
+2. **Input Detection**: System detects input type (images, code files, or text)
+3. **Extraction**: System extracts a unified design system (style, layout, animation) from the references.
+4. **Assembly**: System creates prototypes using the extracted system.
 
 **Example:**
 
 ```bash
+# Using reference images
 /workflow:ui-design:imitate-auto \
-  --url-map "landing:https://stripe.com, pricing:https://stripe.com/pricing, docs:https://stripe.com/docs" \
-  --capture-mode batch \
+  --input "design-refs/*.png" \
+  --session WFS-002
+
+# Or importing from existing code
+/workflow:ui-design:imitate-auto \
+  --input "./src/components" \
   --session WFS-002
 ```
 
 **Output:**
-- Screenshots of all URLs
 - `design-tokens.json` (unified style system)
 - `layout-templates.json` (page structures)
-- 3 HTML prototypes matching the captured pages
+- HTML prototypes based on the input references
 
 ---
 
@@ -204,10 +208,10 @@ For high-volume generation:
 - Specify the *targets* (e.g., "dashboard, settings page")
 - Include functional requirements (e.g., "responsive, mobile-first")
 
-**For URL Mapping:**
-- First URL is treated as primary source of truth
-- Use descriptive keys in `--url-map`
-- Ensure URLs are accessible (no authentication walls)
+**For Local References:**
+- Use high-quality reference images (PNG, JPG)
+- Organize files in accessible directories
+- For code imports, ensure files are properly structured (CSS, JS, HTML)
 
 ---
 
@@ -233,8 +237,8 @@ You can run UI design workflows within an existing workflow session:
 **Example: Imitation + Custom Extraction**
 
 ```bash
-# 1. Replicate existing design
-/workflow:ui-design:imitate-auto --url-map "ref:https://example.com"
+# 1. Import design from local references
+/workflow:ui-design:imitate-auto --input "design-refs/*.png"
 
 # 2. Extract additional layouts and generate prototypes
 /workflow:ui-design:layout-extract --targets "new-page-1,new-page-2"

.claude/skills/command-guide/index/all-commands.json

@@ -101,7 +101,7 @@
   {
     "name": "enhance-prompt",
     "command": "/enhance-prompt",
-    "description": "Enhanced prompt transformation using session memory and codebase analysis with --enhance flag detection",
+    "description": "Enhanced prompt transformation using session memory and intent analysis with --enhance flag detection",
     "arguments": "user input to enhance",
     "category": "general",
     "subcategory": null,
@@ -428,11 +428,33 @@
     "difficulty": "Intermediate",
     "file_path": "workflow/execute.md"
   },
+  {
+    "name": "init",
+    "command": "/workflow:init",
+    "description": "Initialize project-level state with intelligent project analysis using cli-explore-agent",
+    "arguments": "[--regenerate]",
+    "category": "workflow",
+    "subcategory": null,
+    "usage_scenario": "general",
+    "difficulty": "Intermediate",
+    "file_path": "workflow/init.md"
+  },
+  {
+    "name": "lite-execute",
+    "command": "/workflow:lite-execute",
+    "description": "Execute tasks based on in-memory plan, prompt description, or file content",
+    "arguments": "[--in-memory] [\\\"task description\\\"|file-path]",
+    "category": "workflow",
+    "subcategory": null,
+    "usage_scenario": "implementation",
+    "difficulty": "Intermediate",
+    "file_path": "workflow/lite-execute.md"
+  },
   {
     "name": "lite-plan",
     "command": "/workflow:lite-plan",
-    "description": "Lightweight interactive planning and execution workflow with in-memory planning, code exploration, and immediate execution after user confirmation",
-    "arguments": "[--tool claude|gemini|qwen|codex] [--quick] \\\"task description\\\"|file.md",
+    "description": "Lightweight interactive planning workflow with in-memory planning, code exploration, and execution dispatch to lite-execute after user confirmation",
+    "arguments": "[-e|--explore] \\\"task description\\\"|file.md",
     "category": "workflow",
     "subcategory": null,
     "usage_scenario": "planning",
@@ -450,17 +472,6 @@
     "difficulty": "Intermediate",
     "file_path": "workflow/plan.md"
   },
-  {
-    "name": "resume",
-    "command": "/workflow:resume",
-    "description": "Resume paused workflow session with automatic progress analysis, pending task identification, and conflict detection",
-    "arguments": "session-id for workflow session to resume",
-    "category": "workflow",
-    "subcategory": null,
-    "usage_scenario": "session-management",
-    "difficulty": "Intermediate",
-    "file_path": "workflow/resume.md"
-  },
   {
     "name": "review",
     "command": "/workflow:review",
@@ -519,8 +530,8 @@
   {
     "name": "workflow:status",
     "command": "/workflow:status",
-    "description": "Generate on-demand task status views from JSON task data with optional task-id filtering for detailed view",
-    "arguments": "[optional: task-id]",
+    "description": "Generate on-demand views for project overview and workflow tasks with optional task-id filtering for detailed view",
+    "arguments": "[optional: --project|task-id|--validate]",
     "category": "workflow",
     "subcategory": null,
     "usage_scenario": "session-management",
@@ -692,17 +703,6 @@
     "difficulty": "Intermediate",
     "file_path": "workflow/ui-design/animation-extract.md"
   },
-  {
-    "name": "capture",
-    "command": "/workflow:ui-design:capture",
-    "description": "Batch screenshot capture for UI design workflows using MCP puppeteer or local fallback with URL mapping",
-    "arguments": "--url-map \"target:url,...\" [--design-id <id>] [--session <id>]",
-    "category": "workflow",
-    "subcategory": "ui-design",
-    "usage_scenario": "general",
-    "difficulty": "Intermediate",
-    "file_path": "workflow/ui-design/capture.md"
-  },
   {
     "name": "workflow:ui-design:codify-style",
     "command": "/workflow:ui-design:codify-style",
@@ -714,6 +714,17 @@
     "difficulty": "Intermediate",
     "file_path": "workflow/ui-design/codify-style.md"
   },
+  {
+    "name": "design-sync",
+    "command": "/workflow:ui-design:design-sync",
+    "description": "Synchronize finalized design system references to brainstorming artifacts, preparing them for /workflow:plan consumption",
+    "arguments": "--session <session_id> [--selected-prototypes \"<list>\"]",
+    "category": "workflow",
+    "subcategory": "ui-design",
+    "usage_scenario": "planning",
+    "difficulty": "Intermediate",
+    "file_path": "workflow/ui-design/design-sync.md"
+  },
   {
     "name": "explore-auto",
     "command": "/workflow:ui-design:explore-auto",
@@ -725,17 +736,6 @@
     "difficulty": "Intermediate",
     "file_path": "workflow/ui-design/explore-auto.md"
   },
-  {
-    "name": "explore-layers",
-    "command": "/workflow:ui-design:explore-layers",
-    "description": "Interactive deep UI capture with depth-controlled layer exploration using MCP puppeteer",
-    "arguments": "--url <url> --depth <1-5> [--design-id <id>] [--session <id>]",
-    "category": "workflow",
-    "subcategory": "ui-design",
-    "usage_scenario": "general",
-    "difficulty": "Intermediate",
-    "file_path": "workflow/ui-design/explore-layers.md"
-  },
   {
     "name": "generate",
     "command": "/workflow:ui-design:generate",
@@ -780,17 +780,6 @@
     "difficulty": "Intermediate",
     "file_path": "workflow/ui-design/layout-extract.md"
   },
-  {
-    "name": "list",
-    "command": "/workflow:ui-design:list",
-    "description": "List all available design runs with metadata (session, created time, prototype count)",
-    "arguments": "[--session <id>]",
-    "category": "workflow",
-    "subcategory": "ui-design",
-    "usage_scenario": "general",
-    "difficulty": "Beginner",
-    "file_path": "workflow/ui-design/list.md"
-  },
   {
     "name": "workflow:ui-design:reference-page-generator",
     "command": "/workflow:ui-design:reference-page-generator",
@@ -812,16 +801,5 @@
     "usage_scenario": "general",
     "difficulty": "Intermediate",
     "file_path": "workflow/ui-design/style-extract.md"
-  },
-  {
-    "name": "update",
-    "command": "/workflow:ui-design:update",
-    "description": "Update brainstorming artifacts with finalized design system references from selected prototypes",
-    "arguments": "--session <session_id> [--selected-prototypes \"<list>\"]",
-    "category": "workflow",
-    "subcategory": "ui-design",
-    "usage_scenario": "general",
-    "difficulty": "Intermediate",
-    "file_path": "workflow/ui-design/update.md"
   }
 ]

.claude/skills/command-guide/index/by-category.json

@@ -109,7 +109,7 @@
       {
         "name": "enhance-prompt",
         "command": "/enhance-prompt",
-        "description": "Enhanced prompt transformation using session memory and codebase analysis with --enhance flag detection",
+        "description": "Enhanced prompt transformation using session memory and intent analysis with --enhance flag detection",
         "arguments": "user input to enhance",
         "category": "general",
         "subcategory": null,
@@ -316,11 +316,33 @@
         "difficulty": "Intermediate",
         "file_path": "workflow/execute.md"
       },
+      {
+        "name": "init",
+        "command": "/workflow:init",
+        "description": "Initialize project-level state with intelligent project analysis using cli-explore-agent",
+        "arguments": "[--regenerate]",
+        "category": "workflow",
+        "subcategory": null,
+        "usage_scenario": "general",
+        "difficulty": "Intermediate",
+        "file_path": "workflow/init.md"
+      },
+      {
+        "name": "lite-execute",
+        "command": "/workflow:lite-execute",
+        "description": "Execute tasks based on in-memory plan, prompt description, or file content",
+        "arguments": "[--in-memory] [\\\"task description\\\"|file-path]",
+        "category": "workflow",
+        "subcategory": null,
+        "usage_scenario": "implementation",
+        "difficulty": "Intermediate",
+        "file_path": "workflow/lite-execute.md"
+      },
       {
         "name": "lite-plan",
         "command": "/workflow:lite-plan",
-        "description": "Lightweight interactive planning and execution workflow with in-memory planning, code exploration, and immediate execution after user confirmation",
-        "arguments": "[--tool claude|gemini|qwen|codex] [--quick] \\\"task description\\\"|file.md",
+        "description": "Lightweight interactive planning workflow with in-memory planning, code exploration, and execution dispatch to lite-execute after user confirmation",
+        "arguments": "[-e|--explore] \\\"task description\\\"|file.md",
         "category": "workflow",
         "subcategory": null,
         "usage_scenario": "planning",
@@ -338,17 +360,6 @@
         "difficulty": "Intermediate",
         "file_path": "workflow/plan.md"
       },
-      {
-        "name": "resume",
-        "command": "/workflow:resume",
-        "description": "Resume paused workflow session with automatic progress analysis, pending task identification, and conflict detection",
-        "arguments": "session-id for workflow session to resume",
-        "category": "workflow",
-        "subcategory": null,
-        "usage_scenario": "session-management",
-        "difficulty": "Intermediate",
-        "file_path": "workflow/resume.md"
-      },
       {
         "name": "review",
         "command": "/workflow:review",
@@ -363,8 +374,8 @@
       {
         "name": "workflow:status",
         "command": "/workflow:status",
-        "description": "Generate on-demand task status views from JSON task data with optional task-id filtering for detailed view",
-        "arguments": "[optional: task-id]",
+        "description": "Generate on-demand views for project overview and workflow tasks with optional task-id filtering for detailed view",
+        "arguments": "[optional: --project|task-id|--validate]",
         "category": "workflow",
         "subcategory": null,
         "usage_scenario": "session-management",
@@ -720,17 +731,6 @@
         "difficulty": "Intermediate",
         "file_path": "workflow/ui-design/animation-extract.md"
       },
-      {
-        "name": "capture",
-        "command": "/workflow:ui-design:capture",
-        "description": "Batch screenshot capture for UI design workflows using MCP puppeteer or local fallback with URL mapping",
-        "arguments": "--url-map \"target:url,...\" [--design-id <id>] [--session <id>]",
-        "category": "workflow",
-        "subcategory": "ui-design",
-        "usage_scenario": "general",
-        "difficulty": "Intermediate",
-        "file_path": "workflow/ui-design/capture.md"
-      },
       {
         "name": "workflow:ui-design:codify-style",
         "command": "/workflow:ui-design:codify-style",
@@ -742,6 +742,17 @@
         "difficulty": "Intermediate",
         "file_path": "workflow/ui-design/codify-style.md"
       },
+      {
+        "name": "design-sync",
+        "command": "/workflow:ui-design:design-sync",
+        "description": "Synchronize finalized design system references to brainstorming artifacts, preparing them for /workflow:plan consumption",
+        "arguments": "--session <session_id> [--selected-prototypes \"<list>\"]",
+        "category": "workflow",
+        "subcategory": "ui-design",
+        "usage_scenario": "planning",
+        "difficulty": "Intermediate",
+        "file_path": "workflow/ui-design/design-sync.md"
+      },
       {
         "name": "explore-auto",
         "command": "/workflow:ui-design:explore-auto",
@@ -753,17 +764,6 @@
         "difficulty": "Intermediate",
         "file_path": "workflow/ui-design/explore-auto.md"
       },
-      {
-        "name": "explore-layers",
-        "command": "/workflow:ui-design:explore-layers",
-        "description": "Interactive deep UI capture with depth-controlled layer exploration using MCP puppeteer",
-        "arguments": "--url <url> --depth <1-5> [--design-id <id>] [--session <id>]",
-        "category": "workflow",
-        "subcategory": "ui-design",
-        "usage_scenario": "general",
-        "difficulty": "Intermediate",
-        "file_path": "workflow/ui-design/explore-layers.md"
-      },
       {
         "name": "generate",
         "command": "/workflow:ui-design:generate",
@@ -808,17 +808,6 @@
         "difficulty": "Intermediate",
         "file_path": "workflow/ui-design/layout-extract.md"
       },
-      {
-        "name": "list",
-        "command": "/workflow:ui-design:list",
-        "description": "List all available design runs with metadata (session, created time, prototype count)",
-        "arguments": "[--session <id>]",
-        "category": "workflow",
-        "subcategory": "ui-design",
-        "usage_scenario": "general",
-        "difficulty": "Beginner",
-        "file_path": "workflow/ui-design/list.md"
-      },
       {
         "name": "workflow:ui-design:reference-page-generator",
         "command": "/workflow:ui-design:reference-page-generator",
@@ -840,17 +829,6 @@
         "usage_scenario": "general",
         "difficulty": "Intermediate",
         "file_path": "workflow/ui-design/style-extract.md"
-      },
-      {
-        "name": "update",
-        "command": "/workflow:ui-design:update",
-        "description": "Update brainstorming artifacts with finalized design system references from selected prototypes",
-        "arguments": "--session <session_id> [--selected-prototypes \"<list>\"]",
-        "category": "workflow",
-        "subcategory": "ui-design",
-        "usage_scenario": "general",
-        "difficulty": "Intermediate",
-        "file_path": "workflow/ui-design/update.md"
       }
     ]
   }

.claude/skills/command-guide/index/by-use-case.json

@@ -71,7 +71,7 @@
     {
       "name": "enhance-prompt",
       "command": "/enhance-prompt",
-      "description": "Enhanced prompt transformation using session memory and codebase analysis with --enhance flag detection",
+      "description": "Enhanced prompt transformation using session memory and intent analysis with --enhance flag detection",
       "arguments": "user input to enhance",
       "category": "general",
       "subcategory": null,
@@ -244,6 +244,17 @@
       "difficulty": "Intermediate",
       "file_path": "workflow/brainstorm/ux-expert.md"
     },
+    {
+      "name": "init",
+      "command": "/workflow:init",
+      "description": "Initialize project-level state with intelligent project analysis using cli-explore-agent",
+      "arguments": "[--regenerate]",
+      "category": "workflow",
+      "subcategory": null,
+      "usage_scenario": "general",
+      "difficulty": "Intermediate",
+      "file_path": "workflow/init.md"
+    },
     {
       "name": "list",
       "command": "/workflow:session:list",
@@ -299,17 +310,6 @@
       "difficulty": "Intermediate",
       "file_path": "workflow/ui-design/animation-extract.md"
     },
-    {
-      "name": "capture",
-      "command": "/workflow:ui-design:capture",
-      "description": "Batch screenshot capture for UI design workflows using MCP puppeteer or local fallback with URL mapping",
-      "arguments": "--url-map \"target:url,...\" [--design-id <id>] [--session <id>]",
-      "category": "workflow",
-      "subcategory": "ui-design",
-      "usage_scenario": "general",
-      "difficulty": "Intermediate",
-      "file_path": "workflow/ui-design/capture.md"
-    },
     {
       "name": "explore-auto",
       "command": "/workflow:ui-design:explore-auto",
@@ -321,17 +321,6 @@
       "difficulty": "Intermediate",
       "file_path": "workflow/ui-design/explore-auto.md"
     },
-    {
-      "name": "explore-layers",
-      "command": "/workflow:ui-design:explore-layers",
-      "description": "Interactive deep UI capture with depth-controlled layer exploration using MCP puppeteer",
-      "arguments": "--url <url> --depth <1-5> [--design-id <id>] [--session <id>]",
-      "category": "workflow",
-      "subcategory": "ui-design",
-      "usage_scenario": "general",
-      "difficulty": "Intermediate",
-      "file_path": "workflow/ui-design/explore-layers.md"
-    },
     {
       "name": "imitate-auto",
       "command": "/workflow:ui-design:imitate-auto",
@@ -354,17 +343,6 @@
       "difficulty": "Intermediate",
       "file_path": "workflow/ui-design/layout-extract.md"
     },
-    {
-      "name": "list",
-      "command": "/workflow:ui-design:list",
-      "description": "List all available design runs with metadata (session, created time, prototype count)",
-      "arguments": "[--session <id>]",
-      "category": "workflow",
-      "subcategory": "ui-design",
-      "usage_scenario": "general",
-      "difficulty": "Beginner",
-      "file_path": "workflow/ui-design/list.md"
-    },
     {
       "name": "style-extract",
       "command": "/workflow:ui-design:style-extract",
@@ -375,17 +353,6 @@
       "usage_scenario": "general",
       "difficulty": "Intermediate",
       "file_path": "workflow/ui-design/style-extract.md"
-    },
-    {
-      "name": "update",
-      "command": "/workflow:ui-design:update",
-      "description": "Update brainstorming artifacts with finalized design system references from selected prototypes",
-      "arguments": "--session <session_id> [--selected-prototypes \"<list>\"]",
-      "category": "workflow",
-      "subcategory": "ui-design",
-      "usage_scenario": "general",
-      "difficulty": "Intermediate",
-      "file_path": "workflow/ui-design/update.md"
     }
   ],
   "implementation": [
@@ -444,6 +411,17 @@
       "difficulty": "Intermediate",
       "file_path": "workflow/execute.md"
     },
+    {
+      "name": "lite-execute",
+      "command": "/workflow:lite-execute",
+      "description": "Execute tasks based on in-memory plan, prompt description, or file content",
+      "arguments": "[--in-memory] [\\\"task description\\\"|file-path]",
+      "category": "workflow",
+      "subcategory": null,
+      "usage_scenario": "implementation",
+      "difficulty": "Intermediate",
+      "file_path": "workflow/lite-execute.md"
+    },
     {
       "name": "test-cycle-execute",
       "command": "/workflow:test-cycle-execute",
@@ -592,8 +570,8 @@
     {
       "name": "lite-plan",
       "command": "/workflow:lite-plan",
-      "description": "Lightweight interactive planning and execution workflow with in-memory planning, code exploration, and immediate execution after user confirmation",
-      "arguments": "[--tool claude|gemini|qwen|codex] [--quick] \\\"task description\\\"|file.md",
+      "description": "Lightweight interactive planning workflow with in-memory planning, code exploration, and execution dispatch to lite-execute after user confirmation",
+      "arguments": "[-e|--explore] \\\"task description\\\"|file.md",
       "category": "workflow",
       "subcategory": null,
       "usage_scenario": "planning",
@@ -633,6 +611,17 @@
       "difficulty": "Intermediate",
       "file_path": "workflow/ui-design/codify-style.md"
     },
+    {
+      "name": "design-sync",
+      "command": "/workflow:ui-design:design-sync",
+      "description": "Synchronize finalized design system references to brainstorming artifacts, preparing them for /workflow:plan consumption",
+      "arguments": "--session <session_id> [--selected-prototypes \"<list>\"]",
+      "category": "workflow",
+      "subcategory": "ui-design",
+      "usage_scenario": "planning",
+      "difficulty": "Intermediate",
+      "file_path": "workflow/ui-design/design-sync.md"
+    },
     {
       "name": "workflow:ui-design:import-from-code",
       "command": "/workflow:ui-design:import-from-code",
@@ -725,17 +714,6 @@
     }
   ],
   "session-management": [
-    {
-      "name": "resume",
-      "command": "/workflow:resume",
-      "description": "Resume paused workflow session with automatic progress analysis, pending task identification, and conflict detection",
-      "arguments": "session-id for workflow session to resume",
-      "category": "workflow",
-      "subcategory": null,
-      "usage_scenario": "session-management",
-      "difficulty": "Intermediate",
-      "file_path": "workflow/resume.md"
-    },
     {
       "name": "complete",
       "command": "/workflow:session:complete",
@@ -761,8 +739,8 @@
     {
       "name": "workflow:status",
       "command": "/workflow:status",
-      "description": "Generate on-demand task status views from JSON task data with optional task-id filtering for detailed view",
-      "arguments": "[optional: task-id]",
+      "description": "Generate on-demand views for project overview and workflow tasks with optional task-id filtering for detailed view",
+      "arguments": "[optional: --project|task-id|--validate]",
       "category": "workflow",
       "subcategory": null,
       "usage_scenario": "session-management",

.claude/skills/command-guide/index/essential-commands.json

@@ -24,8 +24,8 @@
   {
     "name": "workflow:status",
     "command": "/workflow:status",
-    "description": "Generate on-demand task status views from JSON task data with optional task-id filtering for detailed view",
-    "arguments": "[optional: task-id]",
+    "description": "Generate on-demand views for project overview and workflow tasks with optional task-id filtering for detailed view",
+    "arguments": "[optional: --project|task-id|--validate]",
     "category": "workflow",
     "subcategory": null,
     "usage_scenario": "session-management",
@@ -109,17 +109,6 @@
     "difficulty": "Intermediate",
     "file_path": "workflow/action-plan-verify.md"
   },
-  {
-    "name": "resume",
-    "command": "/workflow:resume",
-    "description": "Resume paused workflow session with automatic progress analysis, pending task identification, and conflict detection",
-    "arguments": "session-id for workflow session to resume",
-    "category": "workflow",
-    "subcategory": null,
-    "usage_scenario": "session-management",
-    "difficulty": "Intermediate",
-    "file_path": "workflow/resume.md"
-  },
   {
     "name": "review",
     "command": "/workflow:review",
@@ -145,7 +134,7 @@
   {
     "name": "enhance-prompt",
     "command": "/enhance-prompt",
-    "description": "Enhanced prompt transformation using session memory and codebase analysis with --enhance flag detection",
+    "description": "Enhanced prompt transformation using session memory and intent analysis with --enhance flag detection",
     "arguments": "user input to enhance",
     "category": "general",
     "subcategory": null,

.claude/skills/command-guide/reference/agents/action-planning-agent.md

@@ -102,7 +102,7 @@ Phase 2: Document Generation (Autonomous Output)
 1. **Extract Tasks**: Parse `analysis_results.tasks` array
 2. **Map Artifacts**: Use `artifacts_inventory` to add artifact references to task.context
 3. **Assess Complexity**: Use `analysis_results.complexity` for document structure decision
-4. **Session Paths**: Use `session_id` to construct output paths (.workflow/{session_id}/)
+4. **Session Paths**: Use `session_id` to construct output paths (.workflow/active/{session_id}/)
 
 ### MCP Integration Guidelines
 
@@ -244,14 +244,14 @@ Generate individual `.task/IMPL-*.json` files with:
 - Low priority: role_analyses
 
 ### 3. Implementation Plan Creation
-Generate `IMPL_PLAN.md` at `.workflow/{session_id}/IMPL_PLAN.md`:
+Generate `IMPL_PLAN.md` at `.workflow/active/{session_id}/IMPL_PLAN.md`:
 
 **Structure**:
 ```markdown
 ---
 identifier: {session_id}
 source: "User requirements"
-analysis: .workflow/{session_id}/.process/ANALYSIS_RESULTS.md
+analysis: .workflow/active/{session_id}/.process/ANALYSIS_RESULTS.md
 ---
 
 # Implementation Plan: {Project Title}
@@ -280,7 +280,7 @@ analysis: .workflow/{session_id}/.process/ANALYSIS_RESULTS.md
 ```
 
 ### 4. TODO List Generation
-Generate `TODO_LIST.md` at `.workflow/{session_id}/TODO_LIST.md`:
+Generate `TODO_LIST.md` at `.workflow/active/{session_id}/TODO_LIST.md`:
 
 **Structure**:
 ```markdown

.claude/skills/command-guide/reference/agents/cli-execution-agent.md

@@ -190,11 +190,11 @@ cd src/auth && gemini -p "CONTEXT: @**/* @../shared/**/*" --include-directories
 
 **Session Detection**:
 ```bash
-find .workflow/ -name '.active-*' -type f
+find .workflow/active/ -name 'WFS-*' -type d
 ```
 
 **Output Paths**:
-- **With session**: `.workflow/WFS-{id}/.chat/{agent}-{timestamp}.md`
+- **With session**: `.workflow/active/WFS-{id}/.chat/{agent}-{timestamp}.md`
 - **No session**: `.workflow/.scratchpad/{agent}-{description}-{timestamp}.md`
 
 **Log Structure**:

.claude/skills/command-guide/reference/agents/cli-explore-agent.md

@@ -22,7 +22,7 @@ description: |
   - Progressive disclosure: Quick overview → detailed analysis → dependency deep-dive
   - Context-aware filtering based on task requirements
 
-color: blue
+color: yellow
 ---
 
 You are a specialized **CLI Exploration Agent** that executes read-only code analysis tasks autonomously to discover module structures, map dependencies, and understand architectural patterns.
@@ -513,37 +513,19 @@ RULES: $(cat ~/.claude/workflows/cli-templates/prompts/analysis/02-analyze-code-
    - Use Gemini semantic analysis as tiebreaker
    - Document uncertainty in report with attribution
 
-## Integration with Other Agents
+## Available Tools & Services
 
-### As Service Provider (Called by Others)
-
-**Planning Agents** (`action-planning-agent`, `conceptual-planning-agent`):
-- **Use Case**: Pre-planning reconnaissance to understand existing code
-- **Input**: Task description + focus areas
-- **Output**: Structural overview + dependency analysis
-- **Flow**: Planning agent → CLI explore agent (quick-scan) → Context for planning
-
-**Execution Agents** (`code-developer`, `cli-execution-agent`):
-- **Use Case**: Refactoring impact analysis before code modifications
-- **Input**: Target files/functions to modify
-- **Output**: Dependency map + risk assessment
-- **Flow**: Execution agent → CLI explore agent (dependency-map) → Safe modification strategy
-
-**UI Design Agent** (`ui-design-agent`):
-- **Use Case**: Discover existing UI components and design tokens
-- **Input**: Component directory + file patterns
-- **Output**: Component inventory + styling patterns
-- **Flow**: UI agent delegates structure analysis to CLI explore agent
-
-### As Consumer (Calls Others)
+This agent can leverage the following tools to enhance analysis:
 
 **Context Search Agent** (`context-search-agent`):
 - **Use Case**: Get project-wide context before analysis
-- **Flow**: CLI explore agent → Context search agent → Enhanced analysis with full context
+- **When to use**: Need comprehensive project understanding beyond file structure
+- **Integration**: Call context-search-agent first, then use results to guide exploration
 
-**MCP Tools**:
+**MCP Tools** (Code Index):
 - **Use Case**: Enhanced file discovery and search capabilities
-- **Flow**: CLI explore agent → Code Index MCP → Faster pattern discovery
+- **When to use**: Large codebases requiring fast pattern discovery
+- **Integration**: Prefer Code Index MCP when available, fallback to rg/bash tools
 
 ## Key Reminders
 
@@ -636,52 +618,3 @@ rg "^import .*;" --type java -n
 # Find test files
 find . -name "*Test.java" -o -name "*Tests.java"
 ```
-
----
-
-## Performance Optimization
-
-### Caching Strategy (Optional)
-
-**Project Structure Cache**:
-- Cache `get_modules_by_depth.sh` output for 1 hour
-- Invalidate on file system changes (watch .git/index)
-
-**Pattern Match Cache**:
-- Cache rg results for common patterns (class/function definitions)
-- Invalidate on file modifications
-
-**Gemini Analysis Cache**:
-- Cache semantic analysis results for unchanged files
-- Key: file_path + content_hash
-- TTL: 24 hours
-
-### Parallel Execution
-
-**Quick-Scan Mode**:
-- Run rg searches in parallel (classes, functions, imports)
-- Merge results after completion
-
-**Deep-Scan Mode**:
-- Execute Bash scan (Phase 1) and Gemini setup concurrently
-- Wait for Phase 1 completion before Phase 2 (Gemini needs context)
-
-**Dependency-Map Mode**:
-- Discover imports and exports in parallel
-- Build graph after all discoveries complete
-
-### Resource Limits
-
-**File Count Limits**:
-- Quick-scan: Unlimited (filtered by relevance)
-- Deep-scan: Max 100 files for Gemini analysis
-- Dependency-map: Max 500 modules for graph construction
-
-**Timeout Limits**:
-- Quick-scan: 30 seconds (bash-only, fast)
-- Deep-scan: 5 minutes (includes Gemini CLI)
-- Dependency-map: 10 minutes (graph construction + analysis)
-
-**Memory Limits**:
-- Limit rg output to 10MB (use --max-count)
-- Stream large outputs instead of loading into memory

.claude/skills/command-guide/reference/agents/cli-lite-planning-agent.md

@@ -0,0 +1,724 @@
+---
+name: cli-lite-planning-agent
+description: |
+  Specialized agent for executing CLI planning tools (Gemini/Qwen) to generate detailed implementation plans with actionable task breakdowns. Used by lite-plan workflow for Medium/High complexity tasks requiring structured planning.
+
+  Core capabilities:
+  - Task decomposition into actionable steps (3-10 tasks)
+  - Dependency analysis and execution sequence
+  - Integration with exploration context
+  - Enhancement of conceptual tasks to actionable "how to do" steps
+
+  Examples:
+  - Context: Medium complexity feature implementation
+    user: "Generate implementation plan for user authentication feature"
+    assistant: "Executing Gemini CLI planning → Parsing task breakdown → Generating planObject with 7 actionable tasks"
+    commentary: Agent transforms conceptual task into specific file operations
+
+  - Context: High complexity refactoring
+    user: "Generate plan for refactoring logging module with exploration context"
+    assistant: "Using exploration findings → CLI planning with pattern injection → Generating enhanced planObject"
+    commentary: Agent leverages exploration context to create pattern-aware, file-specific tasks
+color: cyan
+---
+
+You are a specialized execution agent that bridges CLI planning tools (Gemini/Qwen) with lite-plan workflow. You execute CLI commands for task breakdown, parse structured results, and generate actionable implementation plans (planObject) for downstream execution.
+
+## Execution Process
+
+### Input Processing
+
+**What you receive (Context Package)**:
+```javascript
+{
+  "task_description": "User's original task description",
+  "explorationContext": {
+    "project_structure": "Overall architecture description",
+    "relevant_files": ["file1.ts", "file2.ts", "..."],
+    "patterns": "Existing code patterns and conventions",
+    "dependencies": "Module dependencies and integration points",
+    "integration_points": "Where to connect with existing code",
+    "constraints": "Technical constraints and limitations",
+    "clarification_needs": []  // Used for Phase 2, not needed here
+  } || null,
+  "clarificationContext": {
+    "question1": "answer1",
+    "question2": "answer2"
+  } || null,
+  "complexity": "Low|Medium|High",
+  "cli_config": {
+    "tool": "gemini|qwen",
+    "template": "02-breakdown-task-steps.txt",
+    "timeout": 3600000,  // 60 minutes for planning
+    "fallback": "qwen"
+  }
+}
+```
+
+**Context Enrichment Strategy**:
+```javascript
+// Merge task description with exploration findings
+const enrichedContext = {
+  task_description: task_description,
+  relevant_files: explorationContext?.relevant_files || [],
+  patterns: explorationContext?.patterns || "No patterns identified",
+  dependencies: explorationContext?.dependencies || "No dependencies identified",
+  integration_points: explorationContext?.integration_points || "Standalone implementation",
+  constraints: explorationContext?.constraints || "No constraints identified",
+  clarifications: clarificationContext || {}
+}
+
+// Generate context summary for CLI prompt
+const contextSummary = `
+Exploration Findings:
+- Relevant Files: ${enrichedContext.relevant_files.join(', ')}
+- Patterns: ${enrichedContext.patterns}
+- Dependencies: ${enrichedContext.dependencies}
+- Integration: ${enrichedContext.integration_points}
+- Constraints: ${enrichedContext.constraints}
+
+User Clarifications:
+${Object.entries(enrichedContext.clarifications).map(([q, a]) => `- ${q}: ${a}`).join('\n')}
+`
+```
+
+### Execution Flow (Three-Phase)
+
+```
+Phase 1: Context Preparation & CLI Execution
+1. Validate context package and extract task context
+2. Merge task description with exploration and clarification context
+3. Construct CLI command with planning template
+4. Execute Gemini/Qwen CLI tool with timeout (60 minutes)
+5. Handle errors and fallback to alternative tool if needed
+6. Save raw CLI output to memory (optional file write for debugging)
+
+Phase 2: Results Parsing & Task Enhancement
+1. Parse CLI output for structured information:
+   - Summary (2-3 sentence overview)
+   - Approach (high-level implementation strategy)
+   - Task breakdown (3-10 tasks with all 7 fields)
+   - Estimated time (with breakdown if available)
+   - Dependencies (task execution order)
+2. Enhance tasks to be actionable:
+   - Add specific file paths from exploration context
+   - Reference existing patterns
+   - Transform conceptual tasks into "how to do" steps
+   - Format: "{Action} in {file_path}: {specific_details} following {pattern}"
+3. Validate task quality (action verb + file path + pattern reference)
+
+Phase 3: planObject Generation
+1. Build planObject structure from parsed and enhanced results
+2. Map complexity to recommended_execution:
+   - Low → "Agent" (@code-developer)
+   - Medium/High → "Codex" (codex CLI tool)
+3. Return planObject (in-memory, no file writes)
+4. Return success status to orchestrator (lite-plan)
+```
+
+## Core Functions
+
+### 1. CLI Planning Execution
+
+**Template-Based Command Construction**:
+```bash
+cd {project_root} && {cli_tool} -p "
+PURPOSE: Generate detailed implementation plan for {complexity} complexity task with structured actionable task breakdown
+TASK:
+• Analyze task requirements: {task_description}
+• Break down into 3-10 structured task objects with complete implementation guidance
+• For each task, provide:
+  - Title and target file
+  - Action type (Create|Update|Implement|Refactor|Add|Delete)
+  - Description (what to implement)
+  - Implementation steps (how to do it, 3-7 specific steps)
+  - Reference (which patterns/files to follow, with specific examples)
+  - Acceptance criteria (verification checklist)
+• Identify dependencies and execution sequence
+• Provide realistic time estimates with breakdown
+MODE: analysis
+CONTEXT: @**/* | Memory: {exploration_context_summary}
+EXPECTED: Structured plan with the following format:
+
+## Implementation Summary
+[2-3 sentence overview]
+
+## High-Level Approach
+[Strategy with pattern references]
+
+## Task Breakdown
+
+### Task 1: [Title]
+**File**: [file/path.ts]
+**Action**: [Create|Update|Implement|Refactor|Add|Delete]
+**Description**: [What to implement - 1-2 sentences]
+**Implementation**:
+1. [Specific step 1 - how to do it]
+2. [Specific step 2 - concrete action]
+3. [Specific step 3 - implementation detail]
+4. [Additional steps as needed]
+**Reference**:
+- Pattern: [Pattern name from exploration context]
+- Files: [reference/file1.ts], [reference/file2.ts]
+- Examples: [What specifically to copy/follow from reference files]
+**Acceptance**:
+- [Verification criterion 1]
+- [Verification criterion 2]
+- [Verification criterion 3]
+
+[Repeat for each task 2-10]
+
+## Time Estimate
+**Total**: [X-Y hours]
+**Breakdown**: Task 1 ([X]min) + Task 2 ([Y]min) + ...
+
+## Dependencies
+- Task 2 depends on Task 1 (requires authentication service)
+- Tasks 3-5 can run in parallel
+- Task 6 requires all previous tasks
+
+RULES: $(cat ~/.claude/workflows/cli-templates/prompts/planning/02-breakdown-task-steps.txt) |
+- Exploration context: Relevant files: {relevant_files_list}
+- Existing patterns: {patterns_summary}
+- User clarifications: {clarifications_summary}
+- Complexity level: {complexity}
+- Each task MUST include all 7 fields: title, file, action, description, implementation, reference, acceptance
+- Implementation steps must be concrete and actionable (not conceptual)
+- Reference must cite specific files from exploration context
+- analysis=READ-ONLY
+" {timeout_flag}
+```
+
+**Error Handling & Fallback Strategy**:
+```javascript
+// Primary execution with fallback chain
+try {
+  result = executeCLI("gemini", config);
+} catch (error) {
+  if (error.code === 429 || error.code === 404) {
+    console.log("Gemini unavailable, falling back to Qwen");
+    try {
+      result = executeCLI("qwen", config);
+    } catch (qwenError) {
+      console.error("Both Gemini and Qwen failed");
+      // Return degraded mode with basic plan
+      return {
+        status: "degraded",
+        message: "CLI planning failed, using fallback strategy",
+        planObject: generateBasicPlan(task_description, explorationContext)
+      };
+    }
+  } else {
+    throw error;
+  }
+}
+
+// Fallback plan generation when all CLI tools fail
+function generateBasicPlan(taskDesc, exploration) {
+  const relevantFiles = exploration?.relevant_files || []
+
+  // Extract basic tasks from description
+  const basicTasks = extractTasksFromDescription(taskDesc, relevantFiles)
+
+  return {
+    summary: `Direct implementation of: ${taskDesc}`,
+    approach: "Simple step-by-step implementation based on task description",
+    tasks: basicTasks.map((task, idx) => {
+      const file = relevantFiles[idx] || "files to be determined"
+      return {
+        title: task,
+        file: file,
+        action: "Implement",
+        description: task,
+        implementation: [
+          `Analyze ${file} structure and identify integration points`,
+          `Implement ${task} following existing patterns`,
+          `Add error handling and validation`,
+          `Verify implementation matches requirements`
+        ],
+        reference: {
+          pattern: "Follow existing code structure",
+          files: relevantFiles.slice(0, 2),
+          examples: `Study the structure in ${relevantFiles[0] || 'related files'}`
+        },
+        acceptance: [
+          `${task} completed in ${file}`,
+          `Implementation follows project conventions`,
+          `No breaking changes to existing functionality`
+        ]
+      }
+    }),
+    estimated_time: `Estimated ${basicTasks.length * 30} minutes (${basicTasks.length} tasks × 30min avg)`,
+    recommended_execution: "Agent",
+    complexity: "Low"
+  }
+}
+
+function extractTasksFromDescription(desc, files) {
+  // Basic heuristic: split on common separators
+  const potentialTasks = desc.split(/[,;]|\band\b/)
+    .map(s => s.trim())
+    .filter(s => s.length > 10)
+
+  if (potentialTasks.length >= 3) {
+    return potentialTasks.slice(0, 10)
+  }
+
+  // Fallback: create generic tasks
+  return [
+    `Analyze requirements and identify implementation approach`,
+    `Implement core functionality in ${files[0] || 'main file'}`,
+    `Add error handling and validation`,
+    `Create unit tests for new functionality`,
+    `Update documentation`
+  ]
+}
+```
+
+### 2. Output Parsing & Enhancement
+
+**Structured Task Parsing**:
+```javascript
+// Parse CLI output for structured tasks
+function extractStructuredTasks(cliOutput) {
+  const tasks = []
+  const taskPattern = /### Task \d+: (.+?)\n\*\*File\*\*: (.+?)\n\*\*Action\*\*: (.+?)\n\*\*Description\*\*: (.+?)\n\*\*Implementation\*\*:\n((?:\d+\. .+?\n)+)\*\*Reference\*\*:\n((?:- .+?\n)+)\*\*Acceptance\*\*:\n((?:- .+?\n)+)/g
+
+  let match
+  while ((match = taskPattern.exec(cliOutput)) !== null) {
+    // Parse implementation steps
+    const implementation = match[5].trim()
+      .split('\n')
+      .map(s => s.replace(/^\d+\. /, ''))
+      .filter(s => s.length > 0)
+
+    // Parse reference fields
+    const referenceText = match[6].trim()
+    const patternMatch = /- Pattern: (.+)/m.exec(referenceText)
+    const filesMatch = /- Files: (.+)/m.exec(referenceText)
+    const examplesMatch = /- Examples: (.+)/m.exec(referenceText)
+
+    const reference = {
+      pattern: patternMatch ? patternMatch[1].trim() : "No pattern specified",
+      files: filesMatch ? filesMatch[1].split(',').map(f => f.trim()) : [],
+      examples: examplesMatch ? examplesMatch[1].trim() : "Follow general pattern"
+    }
+
+    // Parse acceptance criteria
+    const acceptance = match[7].trim()
+      .split('\n')
+      .map(s => s.replace(/^- /, ''))
+      .filter(s => s.length > 0)
+
+    tasks.push({
+      title: match[1].trim(),
+      file: match[2].trim(),
+      action: match[3].trim(),
+      description: match[4].trim(),
+      implementation: implementation,
+      reference: reference,
+      acceptance: acceptance
+    })
+  }
+
+  return tasks
+}
+
+const parsedResults = {
+  summary: extractSection("Implementation Summary"),
+  approach: extractSection("High-Level Approach"),
+  raw_tasks: extractStructuredTasks(cliOutput),
+  time_estimate: extractSection("Time Estimate"),
+  dependencies: extractSection("Dependencies")
+}
+```
+
+**Validation & Enhancement**:
+```javascript
+// Validate and enhance tasks if CLI output is incomplete
+function validateAndEnhanceTasks(rawTasks, explorationContext) {
+  return rawTasks.map(taskObj => {
+    // Validate required fields
+    const validated = {
+      title: taskObj.title || "Unnamed task",
+      file: taskObj.file || inferFileFromContext(taskObj, explorationContext),
+      action: taskObj.action || inferAction(taskObj.title),
+      description: taskObj.description || taskObj.title,
+      implementation: taskObj.implementation?.length > 0
+        ? taskObj.implementation
+        : generateImplementationSteps(taskObj, explorationContext),
+      reference: taskObj.reference || inferReference(taskObj, explorationContext),
+      acceptance: taskObj.acceptance?.length > 0
+        ? taskObj.acceptance
+        : generateAcceptanceCriteria(taskObj)
+    }
+
+    return validated
+  })
+}
+
+// Helper functions for inference
+function inferFileFromContext(taskObj, explorationContext) {
+  const relevantFiles = explorationContext?.relevant_files || []
+  const titleLower = taskObj.title.toLowerCase()
+  const matchedFile = relevantFiles.find(f =>
+    titleLower.includes(f.split('/').pop().split('.')[0].toLowerCase())
+  )
+  return matchedFile || "file-to-be-determined.ts"
+}
+
+function inferAction(title) {
+  if (/create|add new|implement/i.test(title)) return "Create"
+  if (/update|modify|change/i.test(title)) return "Update"
+  if (/refactor/i.test(title)) return "Refactor"
+  if (/delete|remove/i.test(title)) return "Delete"
+  return "Implement"
+}
+
+function generateImplementationSteps(taskObj, explorationContext) {
+  const patterns = explorationContext?.patterns || ""
+  return [
+    `Analyze ${taskObj.file} structure and identify integration points`,
+    `Implement ${taskObj.title} following ${patterns || 'existing patterns'}`,
+    `Add error handling and validation`,
+    `Update related components if needed`,
+    `Verify implementation matches requirements`
+  ]
+}
+
+function inferReference(taskObj, explorationContext) {
+  const patterns = explorationContext?.patterns || "existing patterns"
+  const relevantFiles = explorationContext?.relevant_files || []
+
+  return {
+    pattern: patterns.split('.')[0] || "Follow existing code structure",
+    files: relevantFiles.slice(0, 2),
+    examples: `Study the structure and methods in ${relevantFiles[0] || 'related files'}`
+  }
+}
+
+function generateAcceptanceCriteria(taskObj) {
+  return [
+    `${taskObj.title} completed in ${taskObj.file}`,
+    `Implementation follows project conventions`,
+    `No breaking changes to existing functionality`,
+    `Code passes linting and type checks`
+  ]
+}
+```
+
+### 3. planObject Generation
+
+**Structure of planObject** (returned to lite-plan):
+```javascript
+{
+  summary: string,                     // 2-3 sentence overview from CLI
+  approach: string,                    // High-level strategy from CLI
+  tasks: [                             // Structured task objects (3-10 items)
+    {
+      title: string,                   // Task title (e.g., "Create AuthService")
+      file: string,                    // Target file path
+      action: string,                  // Action type: Create|Update|Implement|Refactor|Add|Delete
+      description: string,             // What to implement (1-2 sentences)
+      implementation: string[],        // Step-by-step how to do it (3-7 steps)
+      reference: {                     // What to reference
+        pattern: string,               // Pattern name (e.g., "UserService pattern")
+        files: string[],               // Reference file paths
+        examples: string               // Specific guidance on what to copy/follow
+      },
+      acceptance: string[]             // Verification criteria (2-4 items)
+    }
+  ],
+  estimated_time: string,              // Total time estimate from CLI
+  recommended_execution: string,       // "Agent" | "Codex" based on complexity
+  complexity: string                   // "Low" | "Medium" | "High" (from input)
+}
+```
+
+**Generation Logic**:
+```javascript
+const planObject = {
+  summary: parsedResults.summary || `Implementation plan for: ${task_description.slice(0, 100)}`,
+
+  approach: parsedResults.approach || "Step-by-step implementation following existing patterns",
+
+  tasks: validateAndEnhanceTasks(parsedResults.raw_tasks, explorationContext),
+
+  estimated_time: parsedResults.time_estimate || estimateTimeFromTaskCount(parsedResults.raw_tasks.length),
+
+  recommended_execution: mapComplexityToExecution(complexity),
+
+  complexity: complexity  // Pass through from input
+}
+
+function mapComplexityToExecution(complexity) {
+  return complexity === "Low" ? "Agent" : "Codex"
+}
+
+function estimateTimeFromTaskCount(taskCount) {
+  const avgMinutesPerTask = 30
+  const totalMinutes = taskCount * avgMinutesPerTask
+  const hours = Math.floor(totalMinutes / 60)
+  const minutes = totalMinutes % 60
+
+  if (hours === 0) {
+    return `${minutes} minutes (${taskCount} tasks × ${avgMinutesPerTask}min avg)`
+  }
+  return `${hours}h ${minutes}m (${taskCount} tasks × ${avgMinutesPerTask}min avg)`
+}
+```
+
+## Quality Standards
+
+### CLI Execution Standards
+- **Timeout Management**: Use dynamic timeout (3600000ms = 60min for planning)
+- **Fallback Chain**: Gemini → Qwen → degraded mode (if both fail)
+- **Error Context**: Include full error details in failure reports
+- **Output Preservation**: Optionally save raw CLI output for debugging
+
+### Task Object Standards
+
+**Completeness** - Each task must have all 7 required fields:
+- **title**: Clear, concise task name
+- **file**: Exact file path (from exploration.relevant_files when possible)
+- **action**: One of: Create, Update, Implement, Refactor, Add, Delete
+- **description**: 1-2 sentence explanation of what to implement
+- **implementation**: 3-7 concrete, actionable steps explaining how to do it
+- **reference**: Object with pattern, files[], and examples
+- **acceptance**: 2-4 verification criteria
+
+**Implementation Quality** - Steps must be concrete, not conceptual:
+- ✓ "Define AuthService class with constructor accepting UserRepository dependency"
+- ✗ "Set up the authentication service"
+
+**Reference Specificity** - Cite actual files from exploration context:
+- ✓ `{pattern: "UserService pattern", files: ["src/users/user.service.ts"], examples: "Follow constructor injection and async method patterns"}`
+- ✗ `{pattern: "service pattern", files: [], examples: "follow patterns"}`
+
+**Acceptance Measurability** - Criteria must be verifiable:
+- ✓ "AuthService class created with login(), logout(), validateToken() methods"
+- ✗ "Service works correctly"
+
+### Task Validation
+
+**Validation Function**:
+```javascript
+function validateTaskObject(task) {
+  const errors = []
+
+  // Validate required fields
+  if (!task.title || task.title.trim().length === 0) {
+    errors.push("Missing title")
+  }
+  if (!task.file || task.file.trim().length === 0) {
+    errors.push("Missing file path")
+  }
+  if (!task.action || !['Create', 'Update', 'Implement', 'Refactor', 'Add', 'Delete'].includes(task.action)) {
+    errors.push(`Invalid action: ${task.action}`)
+  }
+  if (!task.description || task.description.trim().length === 0) {
+    errors.push("Missing description")
+  }
+  if (!task.implementation || task.implementation.length < 3) {
+    errors.push("Implementation must have at least 3 steps")
+  }
+  if (!task.reference || !task.reference.pattern) {
+    errors.push("Missing pattern reference")
+  }
+  if (!task.acceptance || task.acceptance.length < 2) {
+    errors.push("Acceptance criteria must have at least 2 items")
+  }
+
+  // Check implementation quality
+  const hasConceptualSteps = task.implementation?.some(step =>
+    /^(handle|manage|deal with|set up|work on)/i.test(step)
+  )
+  if (hasConceptualSteps) {
+    errors.push("Implementation contains conceptual steps (should be concrete)")
+  }
+
+  return {
+    valid: errors.length === 0,
+    errors: errors
+  }
+}
+```
+
+**Good vs Bad Examples**:
+```javascript
+// ❌ BAD (Incomplete, vague)
+{
+  title: "Add authentication",
+  file: "auth.ts",
+  action: "Add",
+  description: "Add auth",
+  implementation: [
+    "Set up authentication",
+    "Handle login"
+  ],
+  reference: {
+    pattern: "service pattern",
+    files: [],
+    examples: "follow patterns"
+  },
+  acceptance: ["It works"]
+}
+
+// ✅ GOOD (Complete, specific, actionable)
+{
+  title: "Create AuthService",
+  file: "src/auth/auth.service.ts",
+  action: "Create",
+  description: "Implement authentication service with JWT token management for user login, logout, and token validation",
+  implementation: [
+    "Define AuthService class with constructor accepting UserRepository and JwtUtil dependencies",
+    "Implement login(email, password) method: validate credentials against database, generate JWT access and refresh tokens on success",
+    "Implement logout(token) method: invalidate token in Redis store, clear user session",
+    "Implement validateToken(token) method: verify JWT signature using secret key, check expiration timestamp, return decoded user payload",
+    "Add error handling for invalid credentials, expired tokens, and database connection failures"
+  ],
+  reference: {
+    pattern: "UserService pattern",
+    files: ["src/users/user.service.ts", "src/utils/jwt.util.ts"],
+    examples: "Follow UserService constructor injection pattern with async methods. Use JwtUtil.generateToken() and JwtUtil.verifyToken() for token operations"
+  },
+  acceptance: [
+    "AuthService class created with login(), logout(), validateToken() methods",
+    "Methods follow UserService async/await pattern with try-catch error handling",
+    "JWT token generation uses JwtUtil with 1h access token and 7d refresh token expiry",
+    "All methods return typed responses (success/error objects)"
+  ]
+}
+```
+
+## Key Reminders
+
+**ALWAYS:**
+- **Validate context package**: Ensure task_description present before CLI execution
+- **Handle CLI errors gracefully**: Use fallback chain (Gemini → Qwen → degraded mode)
+- **Parse CLI output structurally**: Extract all 7 task fields (title, file, action, description, implementation, reference, acceptance)
+- **Validate task objects**: Each task must have all required fields with quality content
+- **Generate complete planObject**: All fields populated with structured task objects
+- **Return in-memory result**: No file writes unless debugging
+- **Preserve exploration context**: Use relevant_files and patterns in task references
+- **Ensure implementation concreteness**: Steps must be actionable, not conceptual
+- **Cite specific references**: Reference actual files from exploration context
+
+**NEVER:**
+- Execute implementation directly (return plan, let lite-execute handle execution)
+- Skip CLI planning (always run CLI even for simple tasks, unless degraded mode)
+- Return vague task objects (validate all required fields)
+- Use conceptual implementation steps ("set up", "handle", "manage")
+- Modify files directly (planning only, no implementation)
+- Exceed timeout limits (use configured timeout value)
+- Return tasks with empty reference files (cite actual exploration files)
+- Skip task validation (all task objects must pass quality checks)
+
+## Configuration & Examples
+
+### CLI Tool Configuration
+
+**Gemini Configuration**:
+```javascript
+{
+  "tool": "gemini",
+  "model": "gemini-2.5-pro",  // Auto-selected, no need to specify
+  "templates": {
+    "task-breakdown": "02-breakdown-task-steps.txt",
+    "architecture-planning": "01-plan-architecture-design.txt",
+    "component-design": "02-design-component-spec.txt"
+  },
+  "timeout": 3600000  // 60 minutes
+}
+```
+
+**Qwen Configuration (Fallback)**:
+```javascript
+{
+  "tool": "qwen",
+  "model": "coder-model",  // Auto-selected
+  "templates": {
+    "task-breakdown": "02-breakdown-task-steps.txt",
+    "architecture-planning": "01-plan-architecture-design.txt"
+  },
+  "timeout": 3600000  // 60 minutes
+}
+```
+
+### Example Execution
+
+**Input Context**:
+```json
+{
+  "task_description": "Implement user authentication with JWT tokens",
+  "explorationContext": {
+    "project_structure": "Express.js REST API with TypeScript, layered architecture (routes → services → repositories)",
+    "relevant_files": [
+      "src/users/user.service.ts",
+      "src/users/user.repository.ts",
+      "src/middleware/cors.middleware.ts",
+      "src/routes/api.ts"
+    ],
+    "patterns": "Service-Repository pattern used throughout. Services in src/{module}/{module}.service.ts, Repositories in src/{module}/{module}.repository.ts. Middleware follows function-based approach in src/middleware/",
+    "dependencies": "Express, TypeORM, bcrypt for password hashing",
+    "integration_points": "Auth service needs to integrate with existing user service and API routes",
+    "constraints": "Must use existing TypeORM entities, follow established error handling patterns"
+  },
+  "clarificationContext": {
+    "token_expiry": "1 hour access token, 7 days refresh token",
+    "password_requirements": "Min 8 chars, must include number and special char"
+  },
+  "complexity": "Medium",
+  "cli_config": {
+    "tool": "gemini",
+    "template": "02-breakdown-task-steps.txt",
+    "timeout": 3600000
+  }
+}
+```
+
+**Execution Summary**:
+1. **Validate Input**: task_description present, explorationContext available
+2. **Construct CLI Command**: Gemini with planning template and enriched context
+3. **Execute CLI**: Gemini runs and returns structured plan (timeout: 60min)
+4. **Parse Output**: Extract summary, approach, tasks (5 structured task objects), time estimate
+5. **Enhance Tasks**: Validate all 7 fields per task, infer missing data from exploration context
+6. **Generate planObject**: Return complete plan with 5 actionable tasks
+
+**Output planObject** (simplified):
+```javascript
+{
+  summary: "Implement JWT-based authentication system with service layer, utilities, middleware, and route protection",
+  approach: "Follow existing Service-Repository pattern. Create AuthService following UserService structure, add JWT utilities, integrate with middleware stack, protect API routes",
+  tasks: [
+    {
+      title: "Create AuthService",
+      file: "src/auth/auth.service.ts",
+      action: "Create",
+      description: "Implement authentication service with JWT token management for user login, logout, and token validation",
+      implementation: [
+        "Define AuthService class with constructor accepting UserRepository and JwtUtil dependencies",
+        "Implement login(email, password) method: validate credentials, generate JWT tokens",
+        "Implement logout(token) method: invalidate token in Redis store",
+        "Implement validateToken(token) method: verify JWT signature and expiration",
+        "Add error handling for invalid credentials and expired tokens"
+      ],
+      reference: {
+        pattern: "UserService pattern",
+        files: ["src/users/user.service.ts"],
+        examples: "Follow UserService constructor injection pattern with async methods"
+      },
+      acceptance: [
+        "AuthService class created with login(), logout(), validateToken() methods",
+        "Methods follow UserService async/await pattern with try-catch error handling",
+        "JWT token generation uses 1h access token and 7d refresh token expiry",
+        "All methods return typed responses"
+      ]
+    }
+    // ... 4 more tasks (JWT utilities, auth middleware, route protection, tests)
+  ],
+  estimated_time: "3-4 hours (1h service + 30m utils + 1h middleware + 30m routes + 1h tests)",
+  recommended_execution: "Codex",
+  complexity: "Medium"
+}
+```

.claude/skills/command-guide/reference/agents/cli-planning-agent.md

@@ -10,7 +10,7 @@ description: |
     commentary: Agent encapsulates CLI execution + result parsing + task generation
 
   - Context: Coverage gap analysis
-    user: "Analyze coverage gaps and generate补充test task"
+    user: "Analyze coverage gaps and generate supplement test task"
     assistant: "Executing CLI analysis for uncovered code paths → Generating test supplement task"
     commentary: Agent handles both analysis and task JSON generation autonomously
 color: purple
@@ -18,12 +18,11 @@ color: purple
 
 You are a specialized execution agent that bridges CLI analysis tools with task generation. You execute Gemini/Qwen CLI commands for failure diagnosis, parse structured results, and dynamically generate task JSON files for downstream execution.
 
-## Core Responsibilities
-
-1. **Execute CLI Analysis**: Run Gemini/Qwen with appropriate templates and context
-2. **Parse CLI Results**: Extract structured information (fix strategies, root causes, modification points)
-3. **Generate Task JSONs**: Create IMPL-fix-N.json or IMPL-supplement-N.json dynamically
-4. **Save Analysis Reports**: Store detailed CLI output as iteration-N-analysis.md
+**Core capabilities:**
+- Execute CLI analysis with appropriate templates and context
+- Parse structured results (fix strategies, root causes, modification points)
+- Generate task JSONs dynamically (IMPL-fix-N.json, IMPL-supplement-N.json)
+- Save detailed analysis reports (iteration-N-analysis.md)
 
 ## Execution Process
 
@@ -43,7 +42,7 @@ You are a specialized execution agent that bridges CLI analysis tools with task
         "file": "tests/test_auth.py",
         "line": 45,
         "criticality": "high",
-        "test_type": "integration"  // ← NEW: L0: static, L1: unit, L2: integration, L3: e2e
+        "test_type": "integration"  // L0: static, L1: unit, L2: integration, L3: e2e
       }
     ],
     "error_messages": ["error1", "error2"],
@@ -61,7 +60,7 @@ You are a specialized execution agent that bridges CLI analysis tools with task
     "tool": "gemini|qwen",
     "model": "gemini-3-pro-preview-11-2025|qwen-coder-model",
     "template": "01-diagnose-bug-root-cause.txt",
-    "timeout": 2400000,
+    "timeout": 2400000,  // 40 minutes for analysis
     "fallback": "qwen"
   },
   "task_config": {
@@ -79,16 +78,16 @@ You are a specialized execution agent that bridges CLI analysis tools with task
 Phase 1: CLI Analysis Execution
 1. Validate context package and extract failure context
 2. Construct CLI command with appropriate template
-3. Execute Gemini/Qwen CLI tool
+3. Execute Gemini/Qwen CLI tool with layer-specific guidance
 4. Handle errors and fallback to alternative tool if needed
 5. Save raw CLI output to .process/iteration-N-cli-output.txt
 
 Phase 2: Results Parsing & Strategy Extraction
 1. Parse CLI output for structured information:
-   - Root cause analysis
+   - Root cause analysis (RCA)
    - Fix strategy and approach
    - Modification points (files, functions, line numbers)
-   - Expected outcome
+   - Expected outcome and verification steps
 2. Extract quantified requirements:
    - Number of files to modify
    - Specific functions to fix (with line numbers)
@@ -96,18 +95,18 @@ Phase 2: Results Parsing & Strategy Extraction
 3. Generate structured analysis report (iteration-N-analysis.md)
 
 Phase 3: Task JSON Generation
-1. Load task JSON template (defined below)
+1. Load task JSON template
 2. Populate template with parsed CLI results
 3. Add iteration context and previous attempts
-4. Write task JSON to .workflow/{session}/.task/IMPL-fix-N.json
+4. Write task JSON to .workflow/session/{session}/.task/IMPL-fix-N.json
 5. Return success status and task ID to orchestrator
 ```
 
 ## Core Functions
 
-### 1. CLI Command Construction
+### 1. CLI Analysis Execution
 
-**Template-Based Approach with Test Layer Awareness**:
+**Template-Based Command Construction with Test Layer Awareness**:
 ```bash
 cd {project_root} && {cli_tool} -p "
 PURPOSE: Analyze {test_type} test failures and generate fix strategy for iteration {iteration}
@@ -151,8 +150,9 @@ const layerGuidance = {
 const guidance = layerGuidance[test_type] || "Analyze holistically, avoid quick patches";
 ```
 
-**Error Handling & Fallback**:
+**Error Handling & Fallback Strategy**:
 ```javascript
+// Primary execution with fallback chain
 try {
   result = executeCLI("gemini", config);
 } catch (error) {
@@ -173,16 +173,18 @@ try {
     throw error;
   }
 }
+
+// Fallback strategy when all CLI tools fail
+function generateBasicFixStrategy(failure_context) {
+  // Generate basic fix task based on error pattern matching
+  // Use previous successful fix patterns from fix-history.json
+  // Limit to simple, low-risk fixes (add null checks, fix typos)
+  // Mark task with meta.analysis_quality: "degraded" flag
+  // Orchestrator will treat degraded analysis with caution
+}
 ```
 
-**Fallback Strategy (When All CLI Tools Fail)**:
-- Generate basic fix task based on error patterns matching
-- Use previous successful fix patterns from fix-history.json
-- Limit to simple, low-risk fixes (add null checks, fix typos)
-- Mark task with `meta.analysis_quality: "degraded"` flag
-- Orchestrator will treat degraded analysis with caution (may skip iteration)
-
-### 2. CLI Output Parsing
+### 2. Output Parsing & Task Generation
 
 **Expected CLI Output Structure** (from bug diagnosis template):
 ```markdown
@@ -220,18 +222,34 @@ try {
 ```javascript
 const parsedResults = {
   root_causes: extractSection("根本原因分析"),
-  modification_points: extractModificationPoints(),
+  modification_points: extractModificationPoints(),  // Returns: ["file:function:lines", ...]
   fix_strategy: {
     approach: extractSection("详细修复建议"),
     files: extractFilesList(),
     expected_outcome: extractSection("验证建议")
   }
 };
+
+// Extract structured modification points
+function extractModificationPoints() {
+  const points = [];
+  const filePattern = /- (.+?\.(?:ts|js|py)) \(lines (\d+-\d+)\): (.+)/g;
+
+  let match;
+  while ((match = filePattern.exec(cliOutput)) !== null) {
+    points.push({
+      file: match[1],
+      lines: match[2],
+      function: match[3],
+      formatted: `${match[1]}:${match[3]}:${match[2]}`
+    });
+  }
+
+  return points;
+}
 ```
 
-### 3. Task JSON Generation (Template Definition)
-
-**Task JSON Template for IMPL-fix-N** (Simplified):
+**Task JSON Generation** (Simplified Template):
 ```json
 {
   "id": "IMPL-fix-{iteration}",
@@ -284,9 +302,7 @@ const parsedResults = {
       {
         "step": "load_analysis_context",
         "action": "Load CLI analysis report for full failure context if needed",
-        "commands": [
-          "Read({meta.analysis_report})"
-        ],
+        "commands": ["Read({meta.analysis_report})"],
         "output_to": "full_failure_analysis",
         "note": "Analysis report contains: failed_tests, error_messages, pass_rate, root causes, previous_attempts"
       }
@@ -334,19 +350,17 @@ const parsedResults = {
 
 **Template Variables Replacement**:
 - `{iteration}`: From context.iteration
-- `{test_type}`: Dominant test type from failed_tests (e.g., "integration", "unit")
+- `{test_type}`: Dominant test type from failed_tests
 - `{dominant_test_type}`: Most common test_type in failed_tests array
-- `{layer_specific_approach}`: Guidance based on test layer from layerGuidance map
+- `{layer_specific_approach}`: Guidance from layerGuidance map
 - `{fix_summary}`: First 50 chars of fix_strategy.approach
 - `{failed_tests.length}`: Count of failures
 - `{modification_points.length}`: Count of modification points
-- `{modification_points}`: Array of file:function:lines from parsed CLI output
+- `{modification_points}`: Array of file:function:lines
 - `{timestamp}`: ISO 8601 timestamp
-- `{parent_task_id}`: ID of the parent test task (e.g., "IMPL-002")
-- `{file1}`, `{file2}`, etc.: Specific file paths from modification_points
-- `{specific_change_1}`, etc.: Change descriptions for each modification point
+- `{parent_task_id}`: ID of parent test task
 
-### 4. Analysis Report Generation
+### 3. Analysis Report Generation
 
 **Structure of iteration-N-analysis.md**:
 ```markdown
@@ -373,6 +387,7 @@ pass_rate: {pass_rate}%
 - **Error**: {test.error}
 - **File**: {test.file}:{test.line}
 - **Criticality**: {test.criticality}
+- **Test Type**: {test.test_type}
 {endforeach}
 
 ## Root Cause Analysis
@@ -403,15 +418,16 @@ See: `.process/iteration-{iteration}-cli-output.txt`
 
 ### CLI Execution Standards
 - **Timeout Management**: Use dynamic timeout (2400000ms = 40min for analysis)
-- **Fallback Chain**: Gemini → Qwen (if Gemini fails with 429/404)
+- **Fallback Chain**: Gemini → Qwen → degraded mode (if both fail)
 - **Error Context**: Include full error details in failure reports
-- **Output Preservation**: Save raw CLI output for debugging
+- **Output Preservation**: Save raw CLI output to .process/ for debugging
 
 ### Task JSON Standards
 - **Quantification**: All requirements must include counts and explicit lists
 - **Specificity**: Modification points must have file:function:line format
 - **Measurability**: Acceptance criteria must include verification commands
 - **Traceability**: Link to analysis reports and CLI output files
+- **Minimal Redundancy**: Use references (analysis_report) instead of embedding full context
 
 ### Analysis Report Standards
 - **Structured Format**: Use consistent markdown sections
@@ -430,19 +446,23 @@ See: `.process/iteration-{iteration}-cli-output.txt`
 - **Link files properly**: Use relative paths from session root
 - **Preserve CLI output**: Save raw output to .process/ for debugging
 - **Generate measurable acceptance criteria**: Include verification commands
+- **Apply layer-specific guidance**: Use test_type to customize analysis approach
 
 **NEVER:**
 - Execute tests directly (orchestrator manages test execution)
 - Skip CLI analysis (always run CLI even for simple failures)
 - Modify files directly (generate task JSON for @test-fix-agent to execute)
-- **Embed redundant data in task JSON** (use analysis_report reference instead)
-- **Copy input context verbatim to output** (creates data duplication)
+- Embed redundant data in task JSON (use analysis_report reference instead)
+- Copy input context verbatim to output (creates data duplication)
 - Generate vague modification points (always specify file:function:lines)
 - Exceed timeout limits (use configured timeout value)
+- Ignore test layer context (L0/L1/L2/L3 determines diagnosis approach)
 
-## CLI Tool Configuration
+## Configuration & Examples
 
-### Gemini Configuration
+### CLI Tool Configuration
+
+**Gemini Configuration**:
 ```javascript
 {
   "tool": "gemini",
@@ -452,11 +472,12 @@ See: `.process/iteration-{iteration}-cli-output.txt`
     "test-failure": "01-diagnose-bug-root-cause.txt",
     "coverage-gap": "02-analyze-code-patterns.txt",
     "regression": "01-trace-code-execution.txt"
-  }
+  },
+  "timeout": 2400000  // 40 minutes
 }
 ```
 
-### Qwen Configuration (Fallback)
+**Qwen Configuration (Fallback)**:
 ```javascript
 {
   "tool": "qwen",
@@ -464,47 +485,12 @@ See: `.process/iteration-{iteration}-cli-output.txt`
   "templates": {
     "test-failure": "01-diagnose-bug-root-cause.txt",
     "coverage-gap": "02-analyze-code-patterns.txt"
-  }
+  },
+  "timeout": 2400000  // 40 minutes
 }
 ```
 
-## Integration with test-cycle-execute
-
-**Orchestrator Call Pattern**:
-```javascript
-// When pass_rate < 95%
-Task(
-  subagent_type="cli-planning-agent",
-  description=`Analyze test failures and generate fix task (iteration ${iteration})`,
-  prompt=`
-    ## Context Package
-    ${JSON.stringify(contextPackage, null, 2)}
-
-    ## Your Task
-    1. Execute CLI analysis using ${cli_config.tool}
-    2. Parse CLI output and extract fix strategy
-    3. Generate IMPL-fix-${iteration}.json with structured task definition
-    4. Save analysis report to .process/iteration-${iteration}-analysis.md
-    5. Report success and task ID back to orchestrator
-  `
-)
-```
-
-**Agent Response**:
-```javascript
-{
-  "status": "success",
-  "task_id": "IMPL-fix-{iteration}",
-  "task_path": ".workflow/{session}/.task/IMPL-fix-{iteration}.json",
-  "analysis_report": ".process/iteration-{iteration}-analysis.md",
-  "cli_output": ".process/iteration-{iteration}-cli-output.txt",
-  "summary": "{fix_strategy.approach first 100 chars}",
-  "modification_points_count": {count},
-  "estimated_complexity": "low|medium|high"
-}
-```
-
-## Example Execution
+### Example Execution
 
 **Input Context**:
 ```json
@@ -530,24 +516,45 @@ Task(
   "cli_config": {
     "tool": "gemini",
     "template": "01-diagnose-bug-root-cause.txt"
+  },
+  "task_config": {
+    "agent": "@test-fix-agent",
+    "type": "test-fix-iteration",
+    "max_iterations": 5
   }
 }
 ```
 
-**Execution Steps**:
-1. Detect test_type: "integration" → Apply integration-specific diagnosis
-2. Execute: `gemini -p "PURPOSE: Analyze integration test failure... [layer-specific context]"`
-   - CLI prompt includes: "Examine component interactions, data flow, interface contracts"
-   - Guidance: "Analyze full call stack and data flow across components"
-3. Parse: Extract RCA, 修复建议, 验证建议 sections
-4. Generate: IMPL-fix-1.json (SIMPLIFIED) with:
+**Execution Summary**:
+1. **Detect test_type**: "integration" → Apply integration-specific diagnosis
+2. **Execute CLI**:
+   ```bash
+   gemini -p "PURPOSE: Analyze integration test failure...
+   TASK: Examine component interactions, data flow, interface contracts...
+   RULES: Analyze full call stack and data flow across components"
+   ```
+3. **Parse Output**: Extract RCA, 修复建议, 验证建议 sections
+4. **Generate Task JSON** (IMPL-fix-1.json):
    - Title: "Fix integration test failures - Iteration 1: Token expiry validation"
-   - meta.analysis_report: ".process/iteration-1-analysis.md" (Reference, not embedded data)
+   - meta.analysis_report: ".process/iteration-1-analysis.md" (reference)
    - meta.test_layer: "integration"
-   - Requirements: "Fix 1 integration test failures by applying the provided fix strategy"
-   - fix_strategy.modification_points: ["src/auth/auth.service.ts:validateToken:45-60", "src/middleware/auth.middleware.ts:checkExpiry:120-135"]
+   - Requirements: "Fix 1 integration test failures by applying provided fix strategy"
+   - fix_strategy.modification_points:
+     - "src/auth/auth.service.ts:validateToken:45-60"
+     - "src/middleware/auth.middleware.ts:checkExpiry:120-135"
    - fix_strategy.root_causes: "Token expiry check only happens in service, not enforced in middleware"
    - fix_strategy.quality_assurance: {avoids_symptom_fix: true, addresses_root_cause: true}
-   - **NO failure_context object** - full context available via analysis_report reference
-5. Save: iteration-1-analysis.md with full CLI output, layer context, failed_tests details, previous_attempts
-6. Return: task_id="IMPL-fix-1", test_layer="integration", status="success"
+5. **Save Analysis Report**: iteration-1-analysis.md with full CLI output, layer context, failed_tests details
+6. **Return**:
+   ```javascript
+   {
+     status: "success",
+     task_id: "IMPL-fix-1",
+     task_path: ".workflow/WFS-test-session-001/.task/IMPL-fix-1.json",
+     analysis_report: ".process/iteration-1-analysis.md",
+     cli_output: ".process/iteration-1-cli-output.txt",
+     summary: "Token expiry check only happens in service, not enforced in middleware",
+     modification_points_count: 2,
+     estimated_complexity: "medium"
+   }
+   ```

.claude/skills/command-guide/reference/agents/context-search-agent.md

@@ -238,7 +238,7 @@ const context = {
 
 **3.5 Brainstorm Artifacts Integration**
 
-If `.workflow/{session}/.brainstorming/` exists, read and include content:
+If `.workflow/session/{session}/.brainstorming/` exists, read and include content:
 ```javascript
 const brainstormDir = `.workflow/${session}/.brainstorming`;
 if (dir_exists(brainstormDir)) {
@@ -274,7 +274,7 @@ Calculate risk level based on:
 
 **3.7 Context Packaging & Output**
 
-**Output**: `.workflow/{session-id}/.process/context-package.json`
+**Output**: `.workflow/active//{session-id}/.process/context-package.json`
 
 **Note**: Task JSONs reference via `context_package_path` field (not in `artifacts`)
 
@@ -422,7 +422,7 @@ Calculate risk level based on:
 ## Quality Validation
 
 Before completion verify:
-- [ ] context-package.json in `.workflow/{session}/.process/`
+- [ ] context-package.json in `.workflow/session/{session}/.process/`
 - [ ] Valid JSON with all required fields
 - [ ] Metadata complete (description, keywords, complexity)
 - [ ] Project context documented (patterns, conventions, tech stack)
@@ -432,25 +432,6 @@ Before completion verify:
 - [ ] File relevance >80%
 - [ ] No sensitive data exposed
 
-## Performance Limits
-
-**File Counts**:
-- Max 30 high-priority (score >0.8)
-- Max 20 medium-priority (score 0.5-0.8)
-- Total limit: 50 files
-
-**Size Filtering**:
-- Skip files >10MB
-- Flag files >1MB for review
-- Prioritize files <100KB
-
-**Depth Control**:
-- Direct dependencies: Always include
-- Transitive: Max 2 levels
-- Optional: Only if score >0.7
-
-**Tool Priority**: Code-Index > ripgrep > find > grep
-
 ## Output Report
 
 ```
@@ -475,7 +456,7 @@ Conflict Detection:
 - Affected: {modules}
 - Mitigation: {strategy}
 
-Output: .workflow/{session}/.process/context-package.json
+Output: .workflow/session/{session}/.process/context-package.json
 (Referenced in task JSONs via top-level `context_package_path` field)
 ```
 

.claude/skills/command-guide/reference/agents/test-context-search-agent.md

@@ -304,7 +304,7 @@ if (!validation.all_passed()) {
 ## Output Location
 
 ```
-.workflow/{test_session_id}/.process/test-context-package.json
+.workflow/active/{test_session_id}/.process/test-context-package.json
 ```
 
 ## Helper Functions Reference

.claude/skills/command-guide/reference/commands/cli/execute.md

@@ -76,8 +76,8 @@ Use `resume --last` when current task extends/relates to previous execution. See
 
 ## Workflow Integration
 
-**Session Management**: Auto-detects `.workflow/.active-*` marker
-- Active session: Save to `.workflow/WFS-[id]/.chat/execute-[timestamp].md`
+**Session Management**: Auto-detects active session from `.workflow/active/` directory
+- Active session: Save to `.workflow/active/WFS-[id]/.chat/execute-[timestamp].md`
 - No session: Create new session or save to scratchpad
 
 **Task Integration**: Load from `.task/[TASK-ID].json`, update status, generate summary

.claude/skills/command-guide/reference/commands/enhance-prompt.md

@@ -1,37 +1,22 @@
 ---
 name: enhance-prompt
-description: Enhanced prompt transformation using session memory and codebase analysis with --enhance flag detection
+description: Enhanced prompt transformation using session memory and intent analysis with --enhance flag detection
 argument-hint: "user input to enhance"
 ---
 
 ## Overview
 
-Systematically enhances user prompts by combining session memory context with codebase patterns, translating ambiguous requests into actionable specifications.
+Systematically enhances user prompts by leveraging session memory context and intent analysis, translating ambiguous requests into actionable specifications.
 
 ## Core Protocol
 
 **Enhancement Pipeline:**
-`Intent Translation` → `Context Integration` → `Gemini Analysis (if needed)` → `Structured Output`
+`Intent Translation` → `Context Integration` → `Structured Output`
 
 **Context Sources:**
 - Session memory (conversation history, previous analysis)
-- Codebase patterns (via Gemini when triggered)
 - Implicit technical requirements
-
-## Gemini Trigger Logic
-
-```pseudo
-FUNCTION should_use_gemini(user_prompt):
-  critical_keywords = ["refactor", "migrate", "redesign", "auth", "payment", "security"]
-
-  RETURN (
-    prompt_affects_multiple_modules(user_prompt, threshold=3) OR
-    any_keyword_in_prompt(critical_keywords, user_prompt)
-  )
-END
-```
-
-**Gemini Integration:** ~/.claude/workflows/intelligent-tools-strategy.md
+- User intent patterns
 
 ## Enhancement Rules
 
@@ -47,22 +32,18 @@ END
 
 ### Context Integration Strategy
 
-**Session Memory First:**
+**Session Memory:**
 - Reference recent conversation context
 - Reuse previously identified patterns
 - Build on established understanding
-
-**Codebase Analysis (via Gemini):**
-- Only when complexity requires it
-- Focus on integration points
-- Identify existing patterns
+- Infer technical requirements from discussion
 
 **Example:**
 ```bash
 # User: "add login"
 # Session Memory: Previous auth discussion, JWT mentioned
 # Inferred: JWT-based auth, integrate with existing session management
-# Gemini (if multi-module): Analyze AuthService patterns, middleware structure
+# Action: Implement JWT authentication with session persistence
 ```
 
 ## Output Structure
@@ -76,7 +57,7 @@ ATTENTION: [Critical constraints]
 
 ### Output Examples
 
-**Simple (no Gemini):**
+**Example 1:**
 ```bash
 # Input: "fix login button"
 INTENT: Debug non-functional login button
@@ -85,28 +66,28 @@ ACTION: Check event binding → verify state updates → test auth flow
 ATTENTION: Preserve existing OAuth integration
 ```
 
-**Complex (with Gemini):**
+**Example 2:**
 ```bash
 # Input: "refactor payment code"
 INTENT: Restructure payment module for maintainability
-CONTEXT: Session memory - PCI compliance requirements
-         Gemini - PaymentService → StripeAdapter pattern identified
-ACTION: Extract reusable validators → isolate payment gateway logic
+CONTEXT: Session memory - PCI compliance requirements, Stripe integration patterns
+ACTION: Extract reusable validators → isolate payment gateway logic → maintain adapter pattern
 ATTENTION: Zero behavior change, maintain PCI compliance, full test coverage
 ```
 
-## Automatic Triggers
+## Enhancement Triggers
 
 - Ambiguous language: "fix", "improve", "clean up"
-- Multi-module impact (>3 modules)
+- Vague requests requiring clarification
+- Complex technical requirements
 - Architecture changes
 - Critical systems: auth, payment, security
-- Complex refactoring
+- Multi-step refactoring
 
 ## Key Principles
 
-1. **Memory First**: Leverage session context before analysis
-2. **Minimal Gemini**: Only when complexity demands it
-3. **Context Reuse**: Build on previous understanding
-4. **Clear Output**: Structured, actionable specifications
+1. **Session Memory First**: Leverage conversation context and established understanding
+2. **Context Reuse**: Build on previous discussions and decisions
+3. **Clear Output**: Structured, actionable specifications
+4. **Intent Clarification**: Transform vague requests into specific technical goals
 5. **Avoid Duplication**: Reference existing context, don't repeat

.claude/skills/command-guide/reference/commands/memory/docs.md

@@ -63,10 +63,10 @@ Lightweight planner that analyzes project structure, decomposes documentation wo
 bash(pwd && basename "$(pwd)" && git rev-parse --show-toplevel 2>/dev/null || pwd && date +%Y%m%d-%H%M%S)
 
 # Create session directories (replace timestamp)
-bash(mkdir -p .workflow/WFS-docs-{timestamp}/.{task,process,summaries} && touch .workflow/.active-WFS-docs-{timestamp})
+bash(mkdir -p .workflow/active/WFS-docs-{timestamp}/.{task,process,summaries})
 
 # Create workflow-session.json (replace values)
-bash(echo '{"session_id":"WFS-docs-{timestamp}","project":"{project} documentation","status":"planning","timestamp":"2024-01-20T14:30:22+08:00","path":".","target_path":"{target_path}","project_root":"{project_root}","project_name":"{project_name}","mode":"full","tool":"gemini","cli_execute":false}' | jq '.' > .workflow/WFS-docs-{timestamp}/workflow-session.json)
+bash(echo '{"session_id":"WFS-docs-{timestamp}","project":"{project} documentation","status":"planning","timestamp":"2024-01-20T14:30:22+08:00","path":".","target_path":"{target_path}","project_root":"{project_root}","project_name":"{project_name}","mode":"full","tool":"gemini","cli_execute":false}' | jq '.' > .workflow/active/WFS-docs-{timestamp}/workflow-session.json)
 ```
 
 ### Phase 2: Analyze Structure
@@ -89,7 +89,7 @@ bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${proj
 bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${project_name} -type f -name "*.md" ! -path "*/README.md" ! -path "*/ARCHITECTURE.md" ! -path "*/EXAMPLES.md" ! -path "*/api/*" 2>/dev/null | xargs cat 2>/dev/null; fi)
 ```
 
-**Data Processing**: Parse bash outputs, calculate statistics, use **Write tool** to create `${session_dir}/.process/phase2-analysis.json` with structure:
+**Data Processing**: Parse bash outputs, calculate statistics, use **Write tool** to create `${session_dir}/.process/doc-planning-data.json` with structure:
 
 ```json
 {
@@ -118,7 +118,7 @@ bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${proj
 
 **Then** use **Edit tool** to update `workflow-session.json` adding analysis field.
 
-**Output**: Single `phase2-analysis.json` with all analysis data (no temp files or Python scripts).
+**Output**: Single `doc-planning-data.json` with all analysis data (no temp files or Python scripts).
 
 **Auto-skipped**: Tests (`**/test/**`, `**/*.test.*`), Build (`**/node_modules/**`, `**/dist/**`), Config (root-level files), Vendor directories.
 
@@ -127,8 +127,8 @@ bash(if [ -d .workflow/docs/\${project_name} ]; then find .workflow/docs/\${proj
 **Commands**:
 
 ```bash
-# Count existing docs from phase2-analysis.json
-bash(cat .workflow/WFS-docs-{timestamp}/.process/phase2-analysis.json | jq '.existing_docs.file_list | length')
+# Count existing docs from doc-planning-data.json
+bash(cat .workflow/WFS-docs-{timestamp}/.process/doc-planning-data.json | jq '.existing_docs.file_list | length')
 ```
 
 **Data Processing**: Use count result, then use **Edit tool** to update `workflow-session.json`:
@@ -182,8 +182,8 @@ Large Projects (single dir >10 docs):
 **Commands**:
 
 ```bash
-# 1. Get top-level directories from phase2-analysis.json
-bash(cat .workflow/WFS-docs-{timestamp}/.process/phase2-analysis.json | jq -r '.top_level_dirs[]')
+# 1. Get top-level directories from doc-planning-data.json
+bash(cat .workflow/WFS-docs-{timestamp}/.process/doc-planning-data.json | jq -r '.top_level_dirs[]')
 
 # 2. Get mode from workflow-session.json
 bash(cat .workflow/WFS-docs-{timestamp}/workflow-session.json | jq -r '.mode // "full"')
@@ -201,7 +201,7 @@ bash(grep -r "router\.|@Get\|@Post" src/ 2>/dev/null && echo "API_FOUND" || echo
    - If total ≤10 docs: create group
    - If total >10 docs: split to 1 dir/group or subdivide
    - If single dir >10 docs: split by subdirectories
-3. Use **Edit tool** to update `phase2-analysis.json` adding groups field:
+3. Use **Edit tool** to update `doc-planning-data.json` adding groups field:
    ```json
    "groups": {
      "count": 3,
@@ -215,7 +215,7 @@ bash(grep -r "router\.|@Get\|@Post" src/ 2>/dev/null && echo "API_FOUND" || echo
 
 **Task ID Calculation**:
 ```bash
-group_count=$(jq '.groups.count' .workflow/WFS-docs-{timestamp}/.process/phase2-analysis.json)
+group_count=$(jq '.groups.count' .workflow/WFS-docs-{timestamp}/.process/doc-planning-data.json)
 readme_id=$((group_count + 1))   # Next ID after groups
 arch_id=$((group_count + 2))
 api_id=$((group_count + 3))
@@ -237,7 +237,7 @@ api_id=$((group_count + 3))
 
 **Generation Process**:
 1. Read configuration values (tool, cli_execute, mode) from workflow-session.json
-2. Read group assignments from phase2-analysis.json
+2. Read group assignments from doc-planning-data.json
 3. Generate Level 1 tasks (IMPL-001 to IMPL-N, one per group)
 4. Generate Level 2+ tasks if mode=full (README, ARCHITECTURE, HTTP API)
 
@@ -262,14 +262,14 @@ api_id=$((group_count + 3))
   },
   "context": {
     "requirements": [
-      "Process directories from group ${group_number} in phase2-analysis.json",
+      "Process directories from group ${group_number} in doc-planning-data.json",
       "Generate docs to .workflow/docs/${project_name}/ (mirrored structure)",
       "Code folders: API.md + README.md; Navigation folders: README.md only",
       "Use pre-analyzed data from Phase 2 (no redundant analysis)"
     ],
     "focus_paths": ["${group_dirs_from_json}"],
     "precomputed_data": {
-      "phase2_analysis": "${session_dir}/.process/phase2-analysis.json"
+      "phase2_analysis": "${session_dir}/.process/doc-planning-data.json"
     }
   },
   "flow_control": {
@@ -278,8 +278,8 @@ api_id=$((group_count + 3))
         "step": "load_precomputed_data",
         "action": "Load Phase 2 analysis and extract group directories",
         "commands": [
-          "bash(cat ${session_dir}/.process/phase2-analysis.json)",
-          "bash(jq '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories' ${session_dir}/.process/phase2-analysis.json)"
+          "bash(cat ${session_dir}/.process/doc-planning-data.json)",
+          "bash(jq '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories' ${session_dir}/.process/doc-planning-data.json)"
         ],
         "output_to": "phase2_context",
         "note": "Single JSON file contains all Phase 2 analysis results"
@@ -324,7 +324,7 @@ api_id=$((group_count + 3))
 {
   "step": 2,
   "title": "Batch generate documentation via CLI",
-  "command": "bash(dirs=$(jq -r '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories[]' ${session_dir}/.process/phase2-analysis.json); for dir in $dirs; do cd \"$dir\" && gemini --approval-mode yolo -p \"PURPOSE: Generate module docs\\nTASK: Create documentation\\nMODE: write\\nCONTEXT: @**/* [phase2_context]\\nEXPECTED: API.md and README.md\\nRULES: Mirror structure\" || echo \"Failed: $dir\"; cd -; done)",
+  "command": "bash(dirs=$(jq -r '.groups.assignments[] | select(.group_id == \"${group_number}\") | .directories[]' ${session_dir}/.process/doc-planning-data.json); for dir in $dirs; do cd \"$dir\" && gemini --approval-mode yolo -p \"PURPOSE: Generate module docs\\nTASK: Create documentation\\nMODE: write\\nCONTEXT: @**/* [phase2_context]\\nEXPECTED: API.md and README.md\\nRULES: Mirror structure\" || echo \"Failed: $dir\"; cd -; done)",
   "depends_on": [1],
   "output": "generated_docs"
 }
@@ -458,14 +458,13 @@ api_id=$((group_count + 3))
 **Unified Structure** (single JSON replaces multiple text files):
 
 ```
-.workflow/
-├── .active-WFS-docs-{timestamp}
+.workflow/active/
 └── WFS-docs-{timestamp}/
     ├── workflow-session.json            # Session metadata
     ├── IMPL_PLAN.md
     ├── TODO_LIST.md
     ├── .process/
-    │   └── phase2-analysis.json         # All Phase 2 analysis data (replaces 7+ files)
+    │   └── doc-planning-data.json         # All Phase 2 analysis data (replaces 7+ files)
     └── .task/
         ├── IMPL-001.json                # Small: all modules | Large: group 1
         ├── IMPL-00N.json                # (Large only: groups 2-N)
@@ -474,7 +473,7 @@ api_id=$((group_count + 3))
         └── IMPL-{N+3}.json              # HTTP API (optional)
 ```
 
-**phase2-analysis.json Structure**:
+**doc-planning-data.json Structure**:
 ```json
 {
   "metadata": {

.claude/skills/command-guide/reference/commands/memory/style-skill-memory.md

@@ -21,12 +21,14 @@ auto-continue: true
 **Key Features**:
 - Extracts primary design references (colors, typography, spacing, etc.)
 - Provides dynamic adjustment guidelines for design tokens
+- Includes prerequisites and tooling requirements (browsers, PostCSS, dark mode)
 - Progressive loading structure for efficient token usage
+- Complete implementation examples with React components
 - Interactive preview showcase
 
 ---
 
-## Usage
+## Quick Reference
 
 ### Command Syntax
 
@@ -51,20 +53,77 @@ package-name    Style reference package name (required)
 /memory:style-skill-memory
 ```
 
+### Key Variables
+
+**Input Variables**:
+- `PACKAGE_NAME`: Style reference package name
+- `PACKAGE_DIR`: `.workflow/reference_style/${package_name}`
+- `SKILL_DIR`: `.claude/skills/style-${package_name}`
+- `REGENERATE`: `true` if --regenerate flag, `false` otherwise
+
+**Data Sources** (Phase 2):
+- `DESIGN_TOKENS_DATA`: Complete design-tokens.json content (from Read)
+- `LAYOUT_TEMPLATES_DATA`: Complete layout-templates.json content (from Read)
+- `ANIMATION_TOKENS_DATA`: Complete animation-tokens.json content (from Read, if exists)
+
+**Metadata** (Phase 2):
+- `COMPONENT_COUNT`: Total components
+- `UNIVERSAL_COUNT`: Universal components count
+- `SPECIALIZED_COUNT`: Specialized components count
+- `UNIVERSAL_COMPONENTS`: Universal component names (first 5)
+- `HAS_ANIMATIONS`: Whether animation-tokens.json exists
+
+**Analysis Output** (`DESIGN_ANALYSIS` - Phase 2):
+- `has_colors`: Colors exist
+- `color_semantic`: Has semantic naming (primary/secondary/accent)
+- `uses_oklch`: Uses modern color spaces (oklch, lab, etc.)
+- `has_dark_mode`: Has separate light/dark mode color tokens
+- `spacing_pattern`: Pattern type ("linear", "geometric", "custom")
+- `spacing_scale`: Actual scale values (e.g., [4, 8, 16, 32, 64])
+- `has_typography`: Typography system exists
+- `typography_hierarchy`: Has size scale for hierarchy
+- `uses_calc`: Uses calc() expressions in token values
+- `has_radius`: Border radius exists
+- `radius_style`: Style characteristic ("sharp" <4px, "moderate" 4-8px, "rounded" >8px)
+- `has_shadows`: Shadow system exists
+- `shadow_pattern`: Elevation naming pattern
+- `has_animations`: Animation tokens exist
+- `animation_range`: Duration range (fast to slow)
+- `easing_variety`: Types of easing functions
+
+### Common Errors
+
+| Error | Cause | Resolution |
+|-------|-------|------------|
+| Package not found | Invalid package name or doesn't exist | Run `/workflow:ui-design:codify-style` first |
+| SKILL already exists | SKILL.md already generated | Use `--regenerate` flag |
+| Missing layout-templates.json | Incomplete package | Verify package integrity, re-run codify-style |
+| Invalid JSON format | Corrupted package files | Regenerate package with codify-style |
+
 ---
 
 ## Execution Process
 
 ### Phase 1: Validate Package
 
-**Purpose**: Check if style reference package exists
-
 **TodoWrite** (First Action):
 ```json
 [
-  {"content": "Validate style reference package", "status": "in_progress", "activeForm": "Validating package"},
-  {"content": "Read package data and extract design references", "status": "pending", "activeForm": "Reading package data"},
-  {"content": "Generate SKILL.md with progressive loading", "status": "pending", "activeForm": "Generating SKILL.md"}
+  {
+    "content": "Validate package exists and check SKILL status",
+    "activeForm": "Validating package and SKILL status",
+    "status": "in_progress"
+  },
+  {
+    "content": "Read package data and analyze design system",
+    "activeForm": "Reading package data and analyzing design system",
+    "status": "pending"
+  },
+  {
+    "content": "Generate SKILL.md with design principles and token values",
+    "activeForm": "Generating SKILL.md with design principles and token values",
+    "status": "pending"
+  }
 ]
 ```
 
@@ -75,8 +134,6 @@ package-name    Style reference package name (required)
 bash(echo "${package_name}" || basename "$(pwd)" | sed 's/^style-//')
 ```
 
-Store result as `package_name`
-
 **Step 2: Validate Package Exists**
 
 ```bash
@@ -113,152 +170,90 @@ if (regenerate_flag && skill_exists) {
 }
 ```
 
-**Summary Variables**:
-- `PACKAGE_NAME`: Style reference package name
-- `PACKAGE_DIR`: `.workflow/reference_style/${package_name}`
-- `SKILL_DIR`: `.claude/skills/style-${package_name}`
-- `REGENERATE`: `true` if --regenerate flag, `false` otherwise
-
-**TodoWrite Update**:
-```json
-[
-  {"content": "Validate style reference package", "status": "completed", "activeForm": "Validating package"},
-  {"content": "Read package data and extract design references", "status": "in_progress", "activeForm": "Reading package data"}
-]
-```
+**TodoWrite Update**: Mark "Validate" as completed, "Read package data" as in_progress
 
 ---
 
-### Phase 2: Read Package Data & Extract Design References
+### Phase 2: Read Package Data & Analyze Design System
 
-**Purpose**: Extract package information and primary design references for SKILL description generation
-
-**Step 1: Count Components**
+**Step 1: Read All JSON Files**
 
 ```bash
-bash(jq '.layout_templates | length' .workflow/reference_style/${package_name}/layout-templates.json 2>/dev/null || echo 0)
-```
+# Read layout templates
+Read(file_path=".workflow/reference_style/${package_name}/layout-templates.json")
 
-Store result as `component_count`
-
-**Step 2: Extract Component Types and Classification**
-
-```bash
-# Extract component names from layout templates
-bash(jq -r '.layout_templates | keys[]' .workflow/reference_style/${package_name}/layout-templates.json 2>/dev/null | head -10)
-
-# Count universal vs specialized components
-bash(jq '[.layout_templates[] | select(.component_type == "universal")] | length' .workflow/reference_style/${package_name}/layout-templates.json 2>/dev/null || echo 0)
-bash(jq '[.layout_templates[] | select(.component_type == "specialized")] | length' .workflow/reference_style/${package_name}/layout-templates.json 2>/dev/null || echo 0)
-
-# Extract universal component names only
-bash(jq -r '.layout_templates | to_entries | map(select(.value.component_type == "universal")) | .[].key' .workflow/reference_style/${package_name}/layout-templates.json 2>/dev/null | head -10)
-```
-
-Store as:
-- `COMPONENT_TYPES`: List of available component types (all)
-- `UNIVERSAL_COUNT`: Number of universal (reusable) components
-- `SPECIALIZED_COUNT`: Number of specialized (project-specific) components
-- `UNIVERSAL_COMPONENTS`: List of universal component names
-
-**Step 3: Read Design Tokens**
-
-```bash
+# Read design tokens
 Read(file_path=".workflow/reference_style/${package_name}/design-tokens.json")
+
+# Read animation tokens (if exists)
+bash(test -f .workflow/reference_style/${package_name}/animation-tokens.json && echo "exists" || echo "missing")
+Read(file_path=".workflow/reference_style/${package_name}/animation-tokens.json")  # if exists
 ```
 
-**Extract Primary Design References**:
-
-**Colors** (top 3-5 most important):
-```bash
-bash(jq -r '.colors | to_entries | .[0:5] | .[] | "\(.key): \(.value)"' .workflow/reference_style/${package_name}/design-tokens.json 2>/dev/null | head -5)
-```
-
-**Typography** (heading and body fonts):
-```bash
-bash(jq -r '.typography | to_entries | select(.key | contains("family")) | .[] | "\(.key): \(.value)"' .workflow/reference_style/${package_name}/design-tokens.json 2>/dev/null)
-```
-
-**Spacing Scale** (base spacing values):
-```bash
-bash(jq -r '.spacing | to_entries | .[0:5] | .[] | "\(.key): \(.value)"' .workflow/reference_style/${package_name}/design-tokens.json 2>/dev/null)
-```
-
-**Border Radius** (base radius values):
-```bash
-bash(jq -r '.border_radius | to_entries | .[] | "\(.key): \(.value)"' .workflow/reference_style/${package_name}/design-tokens.json 2>/dev/null)
-```
-
-**Shadows** (elevation levels):
-```bash
-bash(jq -r '.shadows | to_entries | .[0:3] | .[] | "\(.key): \(.value)"' .workflow/reference_style/${package_name}/design-tokens.json 2>/dev/null)
-```
-
-Store extracted references as:
-- `PRIMARY_COLORS`: List of primary color tokens
-- `TYPOGRAPHY_FONTS`: Font family tokens
-- `SPACING_SCALE`: Base spacing values
-- `BORDER_RADIUS`: Radius values
-- `SHADOWS`: Shadow definitions
-
-**Step 4: Read Animation Tokens (if available)**
+**Step 2: Extract Metadata for Description**
 
 ```bash
-# Check if animation tokens exist
-bash(test -f .workflow/reference_style/${package_name}/animation-tokens.json && echo "available" || echo "not_available")
+# Count components and classify by type
+bash(jq '.layout_templates | length' layout-templates.json)
+bash(jq '[.layout_templates[] | select(.component_type == "universal")] | length' layout-templates.json)
+bash(jq '[.layout_templates[] | select(.component_type == "specialized")] | length' layout-templates.json)
+bash(jq -r '.layout_templates | to_entries[] | select(.value.component_type == "universal") | .key' layout-templates.json | head -5)
 ```
 
-If available, extract:
-```bash
-Read(file_path=".workflow/reference_style/${package_name}/animation-tokens.json")
+Store results in metadata variables (see [Key Variables](#key-variables))
 
-# Extract primary animation values
-bash(jq -r '.duration | to_entries | .[] | "\(.key): \(.value)"' .workflow/reference_style/${package_name}/animation-tokens.json 2>/dev/null)
-bash(jq -r '.easing | to_entries | .[0:3] | .[] | "\(.key): \(.value)"' .workflow/reference_style/${package_name}/animation-tokens.json 2>/dev/null)
-```
+**Step 3: Analyze Design System for Dynamic Principles**
 
-Store as:
-- `ANIMATION_DURATIONS`: Animation duration tokens
-- `EASING_FUNCTIONS`: Easing function tokens
-
-**Step 5: Count Files**
+Analyze design-tokens.json to extract characteristics and patterns:
 
 ```bash
-bash(cd .workflow/reference_style/${package_name} && ls -1 *.json *.html *.css 2>/dev/null | wc -l)
+# Color system characteristics
+bash(jq '.colors | keys' design-tokens.json)
+bash(jq '.colors | to_entries[0:2] | map(.value)' design-tokens.json)
+# Check for modern color spaces
+bash(jq '.colors | to_entries[] | .value | test("oklch|lab|lch")' design-tokens.json)
+# Check for dark mode variants
+bash(jq '.colors | keys | map(select(contains("dark") or contains("light")))' design-tokens.json)
+# → Store: has_colors, color_semantic, uses_oklch, has_dark_mode
+
+# Spacing pattern detection
+bash(jq '.spacing | to_entries | map(.value) | map(gsub("[^0-9.]"; "") | tonumber)' design-tokens.json)
+# Analyze pattern: linear (4-8-12-16) vs geometric (4-8-16-32) vs custom
+# → Store: spacing_pattern, spacing_scale
+
+# Typography characteristics
+bash(jq '.typography | keys | map(select(contains("family") or contains("weight")))' design-tokens.json)
+bash(jq '.typography | to_entries | map(select(.key | contains("size"))) | .[].value' design-tokens.json)
+# Check for calc() usage
+bash(jq '. | tostring | test("calc\\(")' design-tokens.json)
+# → Store: has_typography, typography_hierarchy, uses_calc
+
+# Border radius style
+bash(jq '.border_radius | to_entries | map(.value)' design-tokens.json)
+# Check range: small (sharp <4px) vs moderate (4-8px) vs large (rounded >8px)
+# → Store: has_radius, radius_style
+
+# Shadow characteristics
+bash(jq '.shadows | keys' design-tokens.json)
+bash(jq '.shadows | to_entries[0].value' design-tokens.json)
+# → Store: has_shadows, shadow_pattern
+
+# Animations (if available)
+bash(jq '.duration | to_entries | map(.value)' animation-tokens.json)
+bash(jq '.easing | keys' animation-tokens.json)
+# → Store: has_animations, animation_range, easing_variety
 ```
 
-Store result as `file_count`
+Store analysis results in `DESIGN_ANALYSIS` (see [Key Variables](#key-variables))
 
-**Summary Data Collected**:
-- `COMPONENT_COUNT`: Number of components in layout templates
-- `UNIVERSAL_COUNT`: Number of universal (reusable) components
-- `SPECIALIZED_COUNT`: Number of specialized (project-specific) components
-- `COMPONENT_TYPES`: List of component types (first 10)
-- `UNIVERSAL_COMPONENTS`: List of universal component names (first 10)
-- `FILE_COUNT`: Total files in package
-- `HAS_ANIMATIONS`: Whether animation tokens are available
-- `PRIMARY_COLORS`: Primary color tokens with values
-- `TYPOGRAPHY_FONTS`: Font family tokens
-- `SPACING_SCALE`: Base spacing scale
-- `BORDER_RADIUS`: Border radius values
-- `SHADOWS`: Shadow definitions
-- `ANIMATION_DURATIONS`: Animation durations (if available)
-- `EASING_FUNCTIONS`: Easing functions (if available)
+**Note**: Analysis focuses on characteristics and patterns, not counts. Include technical feature detection (oklch, calc, dark mode) for Prerequisites section.
 
-**TodoWrite Update**:
-```json
-[
-  {"content": "Read package data and extract design references", "status": "completed", "activeForm": "Reading package data"},
-  {"content": "Generate SKILL.md with progressive loading", "status": "in_progress", "activeForm": "Generating SKILL.md"}
-]
-```
+**TodoWrite Update**: Mark "Read package data" as completed, "Generate SKILL.md" as in_progress
 
 ---
 
 ### Phase 3: Generate SKILL.md
 
-**Purpose**: Create SKILL memory index with progressive loading structure and design references
-
 **Step 1: Create SKILL Directory**
 
 ```bash
@@ -272,336 +267,57 @@ bash(mkdir -p .claude/skills/style-${package_name})
 {package_name} project-independent design system with {universal_count} universal layout templates and interactive preview (located at .workflow/reference_style/{package_name}). Load when working with reusable UI components, design tokens, layout patterns, or implementing visual consistency. Excludes {specialized_count} project-specific components.
 ```
 
-**Key Elements**:
-- **Universal Count**: Emphasize available reusable layout templates
-- **Project Independence**: Clearly state project-independent nature
-- **Specialized Exclusion**: Mention excluded project-specific components
-- **Path Reference**: Precise package location
-- **Trigger Keywords**: reusable UI components, design tokens, layout patterns, visual consistency
-- **Action Coverage**: working with, analyzing, implementing
+**Step 3: Load and Process SKILL.md Template**
 
-**Example**:
-```
-main-app-style-v1 project-independent design system with 5 universal layout templates and interactive preview (located at .workflow/reference_style/main-app-style-v1). Load when working with reusable UI components, design tokens, layout patterns, or implementing visual consistency. Excludes 3 project-specific components.
-```
-
-**Step 3: Write SKILL.md**
-
-Use Write tool to generate SKILL.md with the following complete content:
-
-```markdown
----
-name: style-{package_name}
-description: {intelligent description from Step 2}
----
-
-# {Package Name} Style SKILL Package
-
-## Documentation: `../../../.workflow/reference_style/{package_name}/`
-
-## Package Overview
-
-**Project-independent style reference package** extracted from codebase with reusable design patterns, tokens, and interactive preview.
-
-**Package Details**:
-- Package: {package_name}
-- Layout Templates: {component_count} total
-  - **Universal Components**: {universal_count} (reusable, project-independent)
-  - **Specialized Components**: {specialized_count} (project-specific, excluded from reference)
-- Universal Component Types: {comma-separated list of UNIVERSAL_COMPONENTS}
-- Files: {file_count}
-- Animation Tokens: {has_animations ? "✓ Available" : "Not available"}
-
-**⚠️ IMPORTANT - Project Independence**:
-This SKILL package represents a **pure style system** independent of any specific project implementation:
-- **Universal components** are generic, reusable patterns (buttons, inputs, cards, navigation)
-- **Specialized components** are project-specific implementations (excluded from this reference)
-- All design tokens and layout patterns are extracted for **reference purposes only**
-- Adapt and customize these references based on your project's specific requirements
-
----
-
-## ⚡ Primary Design References
-
-**IMPORTANT**: These are **reference values** extracted from the codebase. They should be **dynamically adjusted** based on your specific design needs, not treated as fixed constraints.
-
-### 🎨 Colors
-
-{FOR each color in PRIMARY_COLORS:
-  - **{color.key}**: `{color.value}`
-}
-
-**Usage Guidelines**:
-- These colors establish the foundation of the design system
-- Adjust saturation, lightness, or hue based on:
-  - Brand requirements and accessibility needs
-  - Context (light/dark mode, high-contrast themes)
-  - User feedback and A/B testing results
-- Use color theory principles to maintain harmony when modifying
-
-### 📝 Typography
-
-{FOR each font in TYPOGRAPHY_FONTS:
-  - **{font.key}**: `{font.value}`
-}
-
-**Usage Guidelines**:
-- Font families can be substituted based on:
-  - Brand identity and design language
-  - Performance requirements (web fonts vs. system fonts)
-  - Accessibility and readability considerations
-  - Platform-specific availability
-- Maintain hierarchy and scale relationships when changing fonts
-
-### 📏 Spacing Scale
-
-{FOR each spacing in SPACING_SCALE:
-  - **{spacing.key}**: `{spacing.value}`
-}
-
-**Usage Guidelines**:
-- Spacing values form a consistent rhythm system
-- Adjust scale based on:
-  - Target device (mobile vs. desktop vs. tablet)
-  - Content density requirements
-  - Component-specific needs (compact vs. comfortable layouts)
-- Maintain proportional relationships when scaling
-
-### 🔲 Border Radius
-
-{FOR each radius in BORDER_RADIUS:
-  - **{radius.key}**: `{radius.value}`
-}
-
-**Usage Guidelines**:
-- Border radius affects visual softness and modernity
-- Adjust based on:
-  - Design aesthetic (sharp vs. rounded vs. pill-shaped)
-  - Component type (buttons, cards, inputs have different needs)
-  - Platform conventions (iOS vs. Android vs. Web)
-
-### 🌫️ Shadows
-
-{FOR each shadow in SHADOWS:
-  - **{shadow.key}**: `{shadow.value}`
-}
-
-**Usage Guidelines**:
-- Shadows create elevation and depth perception
-- Adjust based on:
-  - Material design depth levels
-  - Light/dark mode contexts
-  - Performance considerations (complex shadows impact rendering)
-  - Visual hierarchy needs
-
-{IF HAS_ANIMATIONS:
-### ⏱️ Animation & Timing
-
-**Durations**:
-{FOR each duration in ANIMATION_DURATIONS:
-  - **{duration.key}**: `{duration.value}`
-}
-
-**Easing Functions**:
-{FOR each easing in EASING_FUNCTIONS:
-  - **{easing.key}**: `{easing.value}`
-}
-
-**Usage Guidelines**:
-- Animation timing affects perceived responsiveness and polish
-- Adjust based on:
-  - User expectations and platform conventions
-  - Accessibility preferences (reduced motion)
-  - Animation type (micro-interactions vs. page transitions)
-  - Performance constraints (mobile vs. desktop)
-}
-
----
-
-## 🎯 Design Adaptation Strategies
-
-### When to Adjust Design References
-
-**Brand Alignment**:
-- Modify colors to match brand identity and guidelines
-- Adjust typography to reflect brand personality
-- Tune spacing and radius to align with brand aesthetic
-
-**Accessibility Requirements**:
-- Increase color contrast ratios for WCAG compliance
-- Adjust font sizes and spacing for readability
-- Modify animation durations for reduced-motion preferences
-
-**Platform Optimization**:
-- Adapt spacing for mobile touch targets (min 44x44px)
-- Adjust shadows and radius for platform conventions
-- Optimize animation performance for target devices
-
-**Context-Specific Needs**:
-- Dark mode: Adjust colors, shadows, and contrasts
-- High-density displays: Fine-tune spacing and sizing
-- Responsive design: Scale tokens across breakpoints
-
-### How to Apply Adjustments
-
-1. **Identify Need**: Determine which tokens need adjustment based on your specific requirements
-2. **Maintain Relationships**: Preserve proportional relationships between related tokens
-3. **Test Thoroughly**: Validate changes across components and use cases
-4. **Document Changes**: Track modifications and rationale for team alignment
-5. **Iterate**: Refine based on user feedback and testing results
-
----
-
-## Progressive Loading
-
-### Level 0: Design Tokens (~5K tokens)
-
-Essential design token system for consistent styling.
-
-**Files**:
-- [Design Tokens](../../../.workflow/reference_style/{package_name}/design-tokens.json) - Colors, typography, spacing, shadows, borders
-
-**Use when**: Quick token reference, applying consistent styles, color/typography queries
-
----
-
-### Level 1: Universal Layout Templates (~12K tokens)
-
-**Project-independent** component layout patterns for reusable UI elements.
-
-**Files**:
-- Level 0 files
-- [Layout Templates](../../../.workflow/reference_style/{package_name}/layout-templates.json) - Component structures with HTML/CSS patterns
-
-**⚠️ Reference Strategy**:
-- **Only reference components with `component_type: "universal"`** - these are reusable, project-independent patterns
-- **Ignore components with `component_type: "specialized"`** - these are project-specific implementations
-- Universal components include: buttons, inputs, forms, cards, navigation, modals, etc.
-- Use universal patterns as **reference templates** to adapt for your specific project needs
-
-**Use when**: Building components, understanding component architecture, implementing layouts
-
----
-
-### Level 2: Complete System (~20K tokens)
-
-Full design system with animations and interactive preview.
-
-**Files**:
-- All Level 1 files
-- [Animation Tokens](../../../.workflow/reference_style/{package_name}/animation-tokens.json) - Animation durations, easing, transitions _(if available)_
-- [Preview HTML](../../../.workflow/reference_style/{package_name}/preview.html) - Interactive showcase (reference only)
-- [Preview CSS](../../../.workflow/reference_style/{package_name}/preview.css) - Showcase styling (reference only)
-
-**Use when**: Comprehensive analysis, animation development, complete design system understanding
-
----
-
-## Interactive Preview
-
-**Location**: `.workflow/reference_style/{package_name}/preview.html`
-
-**View in Browser**:
+**⚠️ CRITICAL - Execute First**:
 ```bash
-cd .workflow/reference_style/{package_name}
-python -m http.server 8080
-# Open http://localhost:8080/preview.html
+bash(cat ~/.claude/workflows/cli-templates/memory/style-skill-memory/skill-md-template.md)
 ```
 
-**Features**:
-- Color palette swatches with values
-- Typography scale and combinations
-- All components with variants and states
-- Spacing, radius, shadow visual examples
-- Interactive state demonstrations
-- Usage code snippets
+**Template Processing**:
+1. **Replace variables**: Substitute all `{variable}` placeholders with actual values from Phase 2
+2. **Generate dynamic sections**:
+   - **Prerequisites & Tooling**: Generate based on `DESIGN_ANALYSIS` technical features (oklch, calc, dark mode)
+   - **Design Principles**: Generate based on `DESIGN_ANALYSIS` characteristics
+   - **Complete Implementation Example**: Include React component example with token adaptation
+   - **Design Token Values**: Iterate `DESIGN_TOKENS_DATA`, `ANIMATION_TOKENS_DATA` and display all key-value pairs with DEFAULT annotations
+3. **Write to file**: Use Write tool to save to `.claude/skills/style-{package_name}/SKILL.md`
 
----
+**Variable Replacement Map**:
+- `{package_name}` → PACKAGE_NAME
+- `{intelligent_description}` → Generated description from Step 2
+- `{component_count}` → COMPONENT_COUNT
+- `{universal_count}` → UNIVERSAL_COUNT
+- `{specialized_count}` → SPECIALIZED_COUNT
+- `{universal_components_list}` → UNIVERSAL_COMPONENTS (comma-separated)
+- `{has_animations}` → HAS_ANIMATIONS
 
-## Usage Guidelines
+**Dynamic Content Generation**:
 
-### Loading Levels
+See template file for complete structure. Key dynamic sections:
 
-**Level 0** (5K): Design tokens only
-```
-Load Level 0 for design token reference
-```
+1. **Prerequisites & Tooling** (based on DESIGN_ANALYSIS technical features):
+   - IF uses_oklch → Include PostCSS plugin requirement (`postcss-oklab-function`)
+   - IF uses_calc → Include preprocessor requirement for calc() expressions
+   - IF has_dark_mode → Include dark mode implementation mechanism (class or media query)
+   - ALWAYS include browser support, jq installation, and local server setup
 
-**Level 1** (12K): Tokens + layout templates
-```
-Load Level 1 for layout templates and design tokens
-```
+2. **Design Principles** (based on DESIGN_ANALYSIS):
+   - IF has_colors → Include "Color System" principle with semantic pattern
+   - IF spacing_pattern detected → Include "Spatial Rhythm" with unified scale description (actual token values)
+   - IF has_typography_hierarchy → Include "Typographic System" with scale examples
+   - IF has_radius → Include "Shape Language" with style characteristic
+   - IF has_shadows → Include "Depth & Elevation" with elevation pattern
+   - IF has_animations → Include "Motion & Timing" with duration range
+   - ALWAYS include "Accessibility First" principle
 
-**Level 2** (20K): Complete system with animations and preview
-```
-Load Level 2 for complete design system with preview reference
-```
-
-### Common Use Cases
-
-**Implementing UI Components**:
-- Load Level 1 for universal layout templates
-- **Only reference components with `component_type: "universal"`** in layout-templates.json
-- Apply design tokens from design-tokens.json
-- Adapt patterns to your project's specific requirements
-
-**Ensuring Style Consistency**:
-- Load Level 0 for design tokens
-- Use design-tokens.json for colors, typography, spacing
-- Check preview.html for visual reference (universal components only)
-
-**Analyzing Component Patterns**:
-- Load Level 2 for complete analysis
-- Review layout-templates.json for component architecture
-- **Filter for `component_type: "universal"` to exclude project-specific implementations**
-- Check preview.html for implementation examples
-
-**Animation Development**:
-- Load Level 2 for animation tokens (if available)
-- Reference animation-tokens.json for durations and easing
-- Apply consistent timing and transitions
-
-**⚠️ Critical Usage Rule**:
-This is a **project-independent style reference system**. When working with layout-templates.json:
-- **USE**: Components marked `component_type: "universal"` as reusable reference patterns
-- **IGNORE**: Components marked `component_type: "specialized"` (project-specific implementations)
-- **ADAPT**: All patterns should be customized for your specific project needs
-
----
-
-## Package Structure
-
-```
-.workflow/reference_style/{package_name}/
-├── layout-templates.json   # Layout templates from codebase
-├── design-tokens.json     # Design token system
-├── animation-tokens.json  # Animation tokens (optional)
-├── preview.html          # Interactive showcase
-└── preview.css           # Showcase styling
-```
-
----
-
-## Regeneration
-
-To update this SKILL memory after package changes:
-
-```bash
-/memory:style-skill-memory {package_name} --regenerate
-```
-
----
-
-## Related Commands
-
-**Generate Package**:
-```bash
-/workflow:ui-design:codify-style --source ./src --package-name {package_name}
-```
-
-**Update Package**:
-Re-run codify-style with same package name to update extraction.
-```
+3. **Design Token Values** (iterate from read data):
+   - Colors: Iterate `DESIGN_TOKENS_DATA.colors`
+   - Typography: Iterate `DESIGN_TOKENS_DATA.typography`
+   - Spacing: Iterate `DESIGN_TOKENS_DATA.spacing`
+   - Border Radius: Iterate `DESIGN_TOKENS_DATA.border_radius` with calc() explanations
+   - Shadows: Iterate `DESIGN_TOKENS_DATA.shadows` with DEFAULT token annotations
+   - Animations (if available): Iterate `ANIMATION_TOKENS_DATA.duration` and `ANIMATION_TOKENS_DATA.easing`
 
 **Step 4: Verify SKILL.md Created**
 
@@ -609,115 +325,27 @@ Re-run codify-style with same package name to update extraction.
 bash(test -f .claude/skills/style-${package_name}/SKILL.md && echo "success" || echo "failed")
 ```
 
-**TodoWrite Update**:
-```json
-[
-  {"content": "Validate style reference package", "status": "completed", "activeForm": "Validating package"},
-  {"content": "Read package data and extract design references", "status": "completed", "activeForm": "Reading package data"},
-  {"content": "Generate SKILL.md with progressive loading", "status": "completed", "activeForm": "Generating SKILL.md"}
-]
-```
-
-**Final Action**: Report completion summary to user
+**TodoWrite Update**: Mark all todos as completed
 
 ---
 
-## Completion Message
+### Completion Message
 
-Display extracted primary design references to user:
+Display a simple completion message with key information:
 
 ```
-✅ SKILL memory generated successfully!
+✅ SKILL memory generated for style package: {package_name}
 
-Package: {package_name}
-SKILL Location: .claude/skills/style-{package_name}/SKILL.md
+📁 Location: .claude/skills/style-{package_name}/SKILL.md
 
-📦 Package Details:
-- Layout Templates: {component_count} total
-  - Universal (reusable): {universal_count}
-  - Specialized (project-specific): {specialized_count}
-- Universal Component Types: {show first 5 UNIVERSAL_COMPONENTS, then "+ X more"}
-- Files: {file_count}
-- Animation Tokens: {has_animations ? "✓ Available" : "Not available"}
+📊 Package Summary:
+   - {component_count} components ({universal_count} universal, {specialized_count} specialized)
+   - Design tokens: colors, typography, spacing, shadows{animations_note}
 
-🎨 Primary Design References Extracted:
-{IF PRIMARY_COLORS exists:
-Colors:
-  {show first 3 PRIMARY_COLORS with key: value}
-  {if more than 3: + X more colors}
-}
-
-{IF TYPOGRAPHY_FONTS exists:
-Typography:
-  {show all TYPOGRAPHY_FONTS}
-}
-
-{IF SPACING_SCALE exists:
-Spacing Scale:
-  {show first 3 SPACING_SCALE items}
-  {if more than 3: + X more spacing tokens}
-}
-
-{IF BORDER_RADIUS exists:
-Border Radius:
-  {show all BORDER_RADIUS}
-}
-
-{IF HAS_ANIMATIONS:
-Animation:
-  Durations: {count ANIMATION_DURATIONS} tokens
-  Easing: {count EASING_FUNCTIONS} functions
-}
-
-⚡ Progressive Loading Levels:
-- Level 0: Design Tokens (~5K tokens)
-- Level 1: Tokens + Layout Templates (~12K tokens)
-- Level 2: Complete System (~20K tokens)
-
-💡 Usage:
-Load design system context when working with:
-- UI component implementation
-- Layout pattern analysis
-- Design token application
-- Style consistency validation
-
-⚠️ IMPORTANT - Project Independence:
-This is a **project-independent style reference system**:
-- Only use universal components (component_type: "universal") as reference patterns
-- Ignore specialized components (component_type: "specialized") - they are project-specific
-- The extracted design references are REFERENCE VALUES, not fixed constraints
-- Dynamically adjust colors, spacing, typography, and other tokens based on:
-  - Brand requirements and accessibility needs
-  - Platform-specific conventions and optimizations
-  - Context (light/dark mode, responsive breakpoints)
-  - User feedback and testing results
-
-See SKILL.md for detailed adjustment guidelines and component filtering instructions.
-
-🎯 Preview:
-Open interactive showcase:
-  file://{absolute_path}/.workflow/reference_style/{package_name}/preview.html
-
-📋 Next Steps:
-1. Load appropriate level based on your task context
-2. Review Primary Design References section for key design tokens
-3. Apply design tokens with dynamic adjustments as needed
-4. Reference layout-templates.json for component structures
-5. Use Design Adaptation Strategies when modifying tokens
+💡 Usage: /memory:load-skill-memory style-{package_name} "your task description"
 ```
 
----
-
-## Error Handling
-
-### Common Errors
-
-| Error | Cause | Resolution |
-|-------|-------|------------|
-| Package not found | Invalid package name or package doesn't exist | Run codify-style first to create package |
-| SKILL already exists | SKILL.md already generated | Use --regenerate to force regeneration |
-| Missing layout-templates.json | Incomplete package | Verify package integrity, re-run codify-style |
-| Invalid JSON format | Corrupted package files | Regenerate package with codify-style |
+Variables: `{package_name}`, `{component_count}`, `{universal_count}`, `{specialized_count}`, `{animations_note}` (", animations" if exists)
 
 ---
 
@@ -727,144 +355,42 @@ Open interactive showcase:
 
 1. **Check Before Generate**: Verify package exists before attempting SKILL generation
 2. **Respect Existing SKILL**: Don't overwrite unless --regenerate flag provided
-3. **Extract Primary References**: Always extract and display key design values (colors, typography, spacing, border radius, shadows, animations)
-4. **Include Adjustment Guidance**: Provide clear guidelines on when and how to dynamically adjust design tokens
-5. **Progressive Loading**: Always include all 3 levels (0-2) with clear token estimates
-6. **Intelligent Description**: Extract component count and key features from metadata
+3. **Load Templates via cat**: Use `cat ~/.claude/workflows/cli-templates/memory/style-skill-memory/{template}` to load templates
+4. **Variable Substitution**: Replace all `{variable}` placeholders with actual values
+5. **Technical Feature Detection**: Analyze tokens for modern features (oklch, calc, dark mode) and generate appropriate Prerequisites section
+6. **Dynamic Content Generation**: Generate sections based on DESIGN_ANALYSIS characteristics
+7. **Unified Spacing Scale**: Use actual token values as primary scale reference, avoid contradictory pattern descriptions
+8. **Direct Iteration**: Iterate data structures (DESIGN_TOKENS_DATA, etc.) for token values
+9. **Annotate Special Tokens**: Add comments for DEFAULT tokens and calc() expressions
+10. **Embed jq Commands**: Include bash/jq commands in SKILL.md for dynamic loading
+11. **Progressive Loading**: Include all 3 levels (0-2) with specific jq commands
+12. **Complete Examples**: Include end-to-end implementation examples (React components)
+13. **Intelligent Description**: Extract component count and key features from metadata
+14. **Emphasize Flexibility**: Strongly warn against rigid copying - values are references for creative adaptation
 
-### SKILL Description Format
+### Template Files Location
 
-**Template**:
-```
-{package_name} project-independent design system with {universal_count} universal layout templates and interactive preview (located at .workflow/reference_style/{package_name}). Load when working with reusable UI components, design tokens, layout patterns, or implementing visual consistency. Excludes {specialized_count} project-specific components.
-```
-
-**Required Elements**:
-- Package name
-- Universal layout template count (emphasize reusability)
-- Project independence statement
-- Specialized component exclusion notice
-- Location (full path)
-- Trigger keywords (reusable UI components, design tokens, layout patterns, visual consistency)
-- Action verbs (working with, analyzing, implementing)
-
-### Primary Design References Extraction
-
-**Required Data Extraction** (from design-tokens.json):
-- Colors: Primary, secondary, accent colors (top 3-5)
-- Typography: Font families for headings and body text
-- Spacing Scale: Base spacing values (xs, sm, md, lg, xl)
-- Border Radius: All radius tokens
-- Shadows: Shadow definitions (top 3 elevation levels)
-
-**Component Classification Extraction** (from layout-templates.json):
-- Universal Count: Number of components with `component_type: "universal"`
-- Specialized Count: Number of components with `component_type: "specialized"`
-- Universal Component Names: List of universal component names (first 10)
-
-**Optional Data Extraction** (from animation-tokens.json if available):
-- Animation Durations: All duration tokens
-- Easing Functions: Top 3 easing functions
-
-**Extraction Format**:
-Use `jq` to extract tokens from JSON files. Each token should include key and value.
-For component classification, filter by `component_type` field.
-
-### Dynamic Adjustment Guidelines
-
-**Include in SKILL.md**:
-1. **Usage Guidelines per Category**: Specific guidance for each token category
-2. **Adjustment Strategies**: When to adjust design references
-3. **Practical Examples**: Context-specific adaptation scenarios
-4. **Best Practices**: How to maintain design system coherence while adjusting
-
-### Progressive Loading Structure
-
-**Level 0** (~5K tokens):
-- design-tokens.json
-
-**Level 1** (~12K tokens):
-- Level 0 files
-- layout-templates.json
-
-**Level 2** (~20K tokens):
-- Level 1 files
-- animation-tokens.json (if exists)
-- preview.html
-- preview.css
-
----
-
-## Benefits
-
-- **Project Independence**: Clear separation between universal (reusable) and specialized (project-specific) components
-- **Component Filtering**: Automatic classification helps identify which patterns are truly reusable
-- **Fast Context Loading**: Progressive levels for efficient token usage
-- **Primary Design References**: Extracted key design values (colors, typography, spacing, etc.) displayed prominently
-- **Dynamic Adjustment Guidance**: Clear instructions on when and how to adjust design tokens
-- **Intelligent Triggering**: Keywords optimize SKILL activation
-- **Complete Reference**: All package files accessible through SKILL
-- **Easy Regeneration**: Simple --regenerate flag for updates
-- **Clear Structure**: Organized levels by use case with component type filtering
-- **Practical Usage Guidelines**: Context-specific adjustment strategies and component selection criteria
-
----
-
-## Architecture
 
 ```
-style-skill-memory
-  ├─ Phase 1: Validate
-  │   ├─ Parse package name from argument or auto-detect
-  │   ├─ Check package exists in .workflow/reference_style/
-  │   └─ Check if SKILL already exists (skip if exists and no --regenerate)
-  │
-  ├─ Phase 2: Read Package Data & Extract Primary References
-  │   ├─ Count components from layout-templates.json
-  │   ├─ Extract component types list
-  │   ├─ Extract primary colors from design-tokens.json (top 3-5)
-  │   ├─ Extract typography (font families)
-  │   ├─ Extract spacing scale (base values)
-  │   ├─ Extract border radius tokens
-  │   ├─ Extract shadow definitions (top 3)
-  │   ├─ Extract animation tokens (if available)
-  │   └─ Count total files in package
-  │
-  └─ Phase 3: Generate SKILL.md
-      ├─ Create SKILL directory
-      ├─ Generate intelligent description with keywords
-      ├─ Write SKILL.md with complete structure:
-      │   ├─ Package Overview
-      │   ├─ Primary Design References
-      │   │   ├─ Colors with usage guidelines
-      │   │   ├─ Typography with usage guidelines
-      │   │   ├─ Spacing with usage guidelines
-      │   │   ├─ Border Radius with usage guidelines
-      │   │   ├─ Shadows with usage guidelines
-      │   │   └─ Animation & Timing (if available)
-      │   ├─ Design Adaptation Strategies
-      │   │   ├─ When to adjust design references
-      │   │   └─ How to apply adjustments
-      │   ├─ Progressive Loading (3 levels)
-      │   ├─ Interactive Preview
-      │   ├─ Usage Guidelines
-      │   ├─ Package Structure
-      │   ├─ Regeneration
-      │   └─ Related Commands
-      ├─ Verify SKILL.md created successfully
-      └─ Display completion message with extracted design references
+Phase 1: Validate
+  ├─ Parse package_name
+  ├─ Check PACKAGE_DIR exists
+  └─ Check SKILL_DIR exists (skip if exists and no --regenerate)
 
-Data Flow:
-  design-tokens.json → jq extraction → PRIMARY_COLORS, TYPOGRAPHY_FONTS,
-                                       SPACING_SCALE, BORDER_RADIUS, SHADOWS
-  animation-tokens.json → jq extraction → ANIMATION_DURATIONS, EASING_FUNCTIONS
-  layout-templates.json → jq extraction → COMPONENT_COUNT, UNIVERSAL_COUNT,
-                                         SPECIALIZED_COUNT, UNIVERSAL_COMPONENTS
-                       → component_type filtering → Universal vs Specialized classification
+Phase 2: Read & Analyze
+  ├─ Read design-tokens.json → DESIGN_TOKENS_DATA
+  ├─ Read layout-templates.json → LAYOUT_TEMPLATES_DATA
+  ├─ Read animation-tokens.json → ANIMATION_TOKENS_DATA (if exists)
+  ├─ Extract Metadata → COMPONENT_COUNT, UNIVERSAL_COUNT, etc.
+  └─ Analyze Design System → DESIGN_ANALYSIS (characteristics)
 
-  Extracted data → SKILL.md generation → Primary Design References section
-                                      → Component Classification section
-                                      → Dynamic Adjustment Guidelines
-                                      → Project Independence warnings
-                                      → Completion message display
+Phase 3: Generate
+  ├─ Create SKILL directory
+  ├─ Generate intelligent description
+  ├─ Load SKILL.md template (cat command)
+  ├─ Replace variables and generate dynamic content
+  ├─ Write SKILL.md
+  ├─ Verify creation
+  ├─ Load completion message template (cat command)
+  └─ Display completion message
 ```

.claude/skills/command-guide/reference/commands/memory/tech-research.md

@@ -128,8 +128,8 @@ Generate a complete tech stack SKILL package with Exa research.
 1. **Extract Tech Stack Information**:
 
    IF MODE == 'session':
-     - Read `.workflow/{SESSION_ID}/workflow-session.json`
-     - Read `.workflow/{SESSION_ID}/.process/context-package.json`
+     - Read `.workflow/active/{session_id}/workflow-session.json`
+     - Read `.workflow/active/{session_id}/.process/context-package.json`
      - Extract tech_stack: {language, frameworks, libraries}
      - Build tech stack name: \"{language}-{framework1}-{framework2}\"
      - Example: \"typescript-react-nextjs\"

.claude/skills/command-guide/reference/commands/task/replan.md

@@ -7,6 +7,14 @@ allowed-tools: Read(*), Write(*), Edit(*), TodoWrite(*), Glob(*), Bash(*)
 
 # Task Replan Command (/task:replan)
 
+> **⚠️ DEPRECATION NOTICE**: This command is maintained for backward compatibility. For new workflows, use `/workflow:replan` which provides:
+> - Session-level replanning with comprehensive artifact updates
+> - Interactive boundary clarification
+> - Updates to IMPL_PLAN.md, TODO_LIST.md, and session metadata
+> - Better integration with workflow sessions
+>
+> **Migration**: Replace `/task:replan IMPL-1 "changes"` with `/workflow:replan IMPL-1 "changes"`
+
 ## Overview
 Replans individual tasks or batch processes multiple tasks with change tracking and backup management.
 
@@ -14,9 +22,6 @@ Replans individual tasks or batch processes multiple tasks with change tracking
 - **Single Task Mode**: Replan one task with specific changes
 - **Batch Mode**: Process multiple tasks from action-plan verification report
 
-## Core Principles
-**Task System:** @~/.claude/workflows/task-core.md
-
 ## Key Features
 - **Single/Batch Operations**: Single task or multiple tasks from verification report
 - **Multiple Input Sources**: Text, files, or verification report
@@ -274,7 +279,7 @@ Backup saved to .task/backup/IMPL-2-v1.0.json
 
 ### Batch Mode - From Verification Report
 ```bash
-/task:replan --batch .workflow/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md
+/task:replan --batch .workflow/active/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md
 
 Parsing verification report...
 Found 4 tasks requiring replanning:

.claude/skills/command-guide/reference/commands/workflow/action-plan-verify.md

@@ -32,7 +32,7 @@ Identify inconsistencies, duplications, ambiguities, and underspecified items be
 IF --session parameter provided:
     session_id = provided session
 ELSE:
-    CHECK: .workflow/.active-* marker files
+    CHECK: find .workflow/active/ -name "WFS-*" -type d
     IF active_session EXISTS:
         session_id = get_active_session()
     ELSE:
@@ -40,7 +40,7 @@ ELSE:
         EXIT
 
 # Derive absolute paths
-session_dir = .workflow/WFS-{session}
+session_dir = .workflow/active/WFS-{session}
 brainstorm_dir = session_dir/.brainstorming
 task_dir = session_dir/.task
 
@@ -333,7 +333,7 @@ Output a Markdown report (no file writes) with the following structure:
 
 #### TodoWrite-Based Remediation Workflow
 
-**Report Location**: `.workflow/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md`
+**Report Location**: `.workflow/active/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md`
 
 **Recommended Workflow**:
 1. **Create TodoWrite Task List**: Extract all findings from report
@@ -361,7 +361,7 @@ Priority Order:
 
 **Save Analysis Report**:
 ```bash
-report_path = ".workflow/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md"
+report_path = ".workflow/active/WFS-{session}/.process/ACTION_PLAN_VERIFICATION.md"
 Write(report_path, full_report_content)
 ```
 
@@ -404,12 +404,12 @@ TodoWrite([
 **File Modification Workflow**:
 ```bash
 # For task JSON modifications:
-1. Read(.workflow/WFS-{session}/.task/IMPL-X.Y.json)
+1. Read(.workflow/active/WFS-{session}/.task/IMPL-X.Y.json)
 2. Edit() to apply fixes
 3. Mark todo as completed
 
 # For IMPL_PLAN modifications:
-1. Read(.workflow/WFS-{session}/IMPL_PLAN.md)
+1. Read(.workflow/active/WFS-{session}/IMPL_PLAN.md)
 2. Edit() to apply strategic changes
 3. Mark todo as completed
 ```

.claude/skills/command-guide/reference/commands/workflow/brainstorm/api-designer.md

@@ -46,10 +46,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -162,7 +162,7 @@ IF update_mode = "incremental":
 
 ### Output Files
 ```
-.workflow/WFS-[topic]/.brainstorming/
+.workflow/active/WFS-[topic]/.brainstorming/
 ├── guidance-specification.md          # Input: Framework (if exists)
 └── api-designer/
     └── analysis.md            # ★ OUTPUT: Framework-based analysis
@@ -181,7 +181,7 @@ IF update_mode = "incremental":
 Session detection and selection:
 ```bash
 # Check for active sessions
-active_sessions=$(find .workflow -name ".active-*" 2>/dev/null)
+active_sessions=$(find .workflow/active/ -name "WFS-*" -type d 2>/dev/null)
 if [ multiple_sessions ]; then
   prompt_user_to_select_session()
 else
@@ -280,7 +280,7 @@ TodoWrite tracking for two-step process:
 
 ### Output Location
 ```
-.workflow/WFS-{topic-slug}/.brainstorming/api-designer/
+.workflow/active/WFS-{topic-slug}/.brainstorming/api-designer/
 ├── analysis.md                 # Primary API design analysis
 ├── api-specification.md        # Detailed endpoint specifications (OpenAPI/Swagger)
 ├── data-contracts.md           # Request/response schemas and validation rules
@@ -531,7 +531,7 @@ Upon completion, update `workflow-session.json`:
       "api_designer": {
         "status": "completed",
         "completed_at": "timestamp",
-        "output_directory": ".workflow/WFS-{topic}/.brainstorming/api-designer/",
+        "output_directory": ".workflow/active/WFS-{topic}/.brainstorming/api-designer/",
         "key_insights": ["endpoint_design", "versioning_strategy", "data_contracts"]
       }
     }

.claude/skills/command-guide/reference/commands/workflow/brainstorm/artifacts.md

@@ -10,7 +10,7 @@ allowed-tools: TodoWrite(*), Read(*), Write(*), Glob(*)
 Six-phase workflow: **Automatic project context collection** → Extract topic challenges → Select roles → Generate task-specific questions → Detect conflicts → Generate confirmed guidance (declarative statements only).
 
 **Input**: `"GOAL: [objective] SCOPE: [boundaries] CONTEXT: [background]" [--count N]`
-**Output**: `.workflow/WFS-{topic}/.brainstorming/guidance-specification.md` (CONFIRMED/SELECTED format)
+**Output**: `.workflow/active/WFS-{topic}/.brainstorming/guidance-specification.md` (CONFIRMED/SELECTED format)
 **Core Principle**: Questions dynamically generated from project context + topic keywords/challenges, NOT from generic templates
 
 **Parameters**:
@@ -32,7 +32,7 @@ Six-phase workflow: **Automatic project context collection** → Extract topic c
 **Standalone Mode**:
 ```json
 [
-  {"content": "Initialize session (.workflow/.active-* check, parse --count parameter)", "status": "pending", "activeForm": "Initializing"},
+  {"content": "Initialize session (.workflow/active/ session check, parse --count parameter)", "status": "pending", "activeForm": "Initializing"},
   {"content": "Phase 0: Automatic project context collection (call context-gather)", "status": "pending", "activeForm": "Phase 0 context collection"},
   {"content": "Phase 1: Extract challenges, output 2-4 task-specific questions, wait for user input", "status": "pending", "activeForm": "Phase 1 topic analysis"},
   {"content": "Phase 2: Recommend count+2 roles, output role selection, wait for user input", "status": "pending", "activeForm": "Phase 2 role selection"},
@@ -133,7 +133,7 @@ b) {role-name} ({中文名})
 ## Execution Phases
 
 ### Session Management
-- Check `.workflow/.active-*` markers first
+- Check `.workflow/active/` for existing sessions
 - Multiple sessions → Prompt selection | Single → Use it | None → Create `WFS-[topic-slug]`
 - Parse `--count N` parameter from user input (default: 3 if not specified)
 - Store decisions in `workflow-session.json` including count parameter
@@ -145,7 +145,7 @@ b) {role-name} ({中文名})
 **Detection Mechanism** (execute first):
 ```javascript
 // Check if context-package already exists
-const contextPackagePath = `.workflow/WFS-{session-id}/.process/context-package.json`;
+const contextPackagePath = `.workflow/active/WFS-{session-id}/.process/context-package.json`;
 
 if (file_exists(contextPackagePath)) {
   // Validate package
@@ -229,7 +229,7 @@ Report completion with statistics.
 
 **Steps**:
 1. **Load Phase 0 context** (if available):
-   - Read `.workflow/WFS-{session-id}/.process/context-package.json`
+   - Read `.workflow/active/WFS-{session-id}/.process/context-package.json`
    - Extract: tech_stack, existing modules, conflict_risk, relevant files
 
 2. **Deep topic analysis** (context-aware):
@@ -449,7 +449,7 @@ FOR each selected role:
 
 ## Output Document Template
 
-**File**: `.workflow/WFS-{topic}/.brainstorming/guidance-specification.md`
+**File**: `.workflow/active/WFS-{topic}/.brainstorming/guidance-specification.md`
 
 ```markdown
 # [Project] - Confirmed Guidance Specification
@@ -596,8 +596,7 @@ ELSE:
 ## File Structure
 
 ```
-.workflow/WFS-[topic]/
-├── .active-brainstorming
+.workflow/active/WFS-[topic]/
 ├── workflow-session.json              # Session metadata ONLY
 └── .brainstorming/
     └── guidance-specification.md      # Full guidance content

.claude/skills/command-guide/reference/commands/workflow/brainstorm/auto-parallel.md

@@ -85,7 +85,7 @@ This workflow runs **fully autonomously** once triggered. Phase 1 (artifacts) ha
 **Validation**:
 - guidance-specification.md created with confirmed decisions
 - workflow-session.json contains selected_roles[] (metadata only, no content duplication)
-- Session directory `.workflow/WFS-{topic}/.brainstorming/` exists
+- Session directory `.workflow/active/WFS-{topic}/.brainstorming/` exists
 
 **TodoWrite Update (Phase 1 SlashCommand invoked - tasks attached)**:
 ```json
@@ -132,13 +132,13 @@ Execute {role-name} analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: {role-name}
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/{role}/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/{role}/
 TOPIC: {user-provided-topic}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -148,7 +148,7 @@ TOPIC: {user-provided-topic}
 
 3. **load_session_metadata**
    - Action: Load session metadata and original user intent
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context (contains original user prompt as PRIMARY reference)
 
 4. **load_style_skill** (ONLY for ui-designer role when style_skill_package exists)
@@ -194,7 +194,7 @@ TOPIC: {user-provided-topic}
 - guidance-specification.md path
 
 **Validation**:
-- Each role creates `.workflow/WFS-{topic}/.brainstorming/{role}/analysis.md` (primary file)
+- Each role creates `.workflow/active/WFS-{topic}/.brainstorming/{role}/analysis.md` (primary file)
 - If content is large (>800 lines), may split to `analysis-1.md`, `analysis-2.md` (max 3 files total)
 - **File naming pattern**: ALL files MUST start with `analysis` prefix (use `analysis*.md` for globbing)
 - **FORBIDDEN naming**: No `recommendations.md`, `recommendations-*.md`, or any non-`analysis` prefixed files
@@ -245,7 +245,7 @@ TOPIC: {user-provided-topic}
 **Input**: `sessionId` from Phase 1
 
 **Validation**:
-- `.workflow/WFS-{topic}/.brainstorming/synthesis-specification.md` exists
+- `.workflow/active/WFS-{topic}/.brainstorming/synthesis-specification.md` exists
 - Synthesis references all role analyses
 
 **TodoWrite Update (Phase 3 SlashCommand invoked - tasks attached)**:
@@ -280,7 +280,7 @@ TOPIC: {user-provided-topic}
 ```
 Brainstorming complete for session: {sessionId}
 Roles analyzed: {count}
-Synthesis: .workflow/WFS-{topic}/.brainstorming/synthesis-specification.md
+Synthesis: .workflow/active/WFS-{topic}/.brainstorming/synthesis-specification.md
 
 ✅ Next Steps:
 1. /workflow:concept-clarify --session {sessionId}  # Optional refinement
@@ -392,31 +392,31 @@ CONTEXT_VARS:
 
 ## Session Management
 
-**⚡ FIRST ACTION**: Check for `.workflow/.active-*` markers before Phase 1
+**⚡ FIRST ACTION**: Check `.workflow/active/` for existing sessions before Phase 1
 
 **Multiple Sessions Support**:
-- Different Claude instances can have different active brainstorming sessions
-- If multiple active sessions found, prompt user to select
-- If single active session found, use it
-- If no active session exists, create `WFS-[topic-slug]`
+- Different Claude instances can have different brainstorming sessions
+- If multiple sessions found, prompt user to select
+- If single session found, use it
+- If no session exists, create `WFS-[topic-slug]`
 
 **Session Continuity**:
-- MUST use selected active session for all phases
+- MUST use selected session for all phases
 - Each role's context stored in session directory
 - Session isolation: Each session maintains independent state
 
 ## Output Structure
 
 **Phase 1 Output**:
-- `.workflow/WFS-{topic}/.brainstorming/guidance-specification.md` (framework content)
-- `.workflow/WFS-{topic}/workflow-session.json` (metadata: selected_roles[], topic, timestamps, style_skill_package)
+- `.workflow/active/WFS-{topic}/.brainstorming/guidance-specification.md` (framework content)
+- `.workflow/active/WFS-{topic}/workflow-session.json` (metadata: selected_roles[], topic, timestamps, style_skill_package)
 
 **Phase 2 Output**:
-- `.workflow/WFS-{topic}/.brainstorming/{role}/analysis.md` (one per role)
+- `.workflow/active/WFS-{topic}/.brainstorming/{role}/analysis.md` (one per role)
 - `.superdesign/design_iterations/` (ui-designer artifacts, if --style-skill provided)
 
 **Phase 3 Output**:
-- `.workflow/WFS-{topic}/.brainstorming/synthesis-specification.md` (integrated analysis)
+- `.workflow/active/WFS-{topic}/.brainstorming/synthesis-specification.md` (integrated analysis)
 
 **⚠️ Storage Separation**: Guidance content in .md files, metadata in .json (no duplication)
 **⚠️ Style References**: When --style-skill provided, workflow-session.json stores style_skill_package name, ui-designer loads from `.claude/skills/style-{package-name}/`
@@ -446,8 +446,7 @@ CONTEXT_VARS:
 
 **File Structure**:
 ```
-.workflow/WFS-[topic]/
-├── .active-brainstorming
+.workflow/active/WFS-[topic]/
 ├── workflow-session.json              # Session metadata ONLY
 └── .brainstorming/
     ├── guidance-specification.md      # Framework (Phase 1)

.claude/skills/command-guide/reference/commands/workflow/brainstorm/data-architect.md

@@ -47,10 +47,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -87,13 +87,13 @@ Execute data-architect analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: data-architect
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/data-architect/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/data-architect/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -103,7 +103,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -163,7 +163,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/data-architect/
+.workflow/active/WFS-{session}/.brainstorming/data-architect/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -208,7 +208,7 @@ TodoWrite({
   "data_architect": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/data-architect/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/data-architect/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/skills/command-guide/reference/commands/workflow/brainstorm/product-manager.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute product-manager analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: product-manager
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/product-manager/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/product-manager/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/product-manager/
+.workflow/active/WFS-{session}/.brainstorming/product-manager/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "product_manager": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/product-manager/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/product-manager/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/skills/command-guide/reference/commands/workflow/brainstorm/product-owner.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute product-owner analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: product-owner
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/product-owner/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/product-owner/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/product-owner/
+.workflow/active/WFS-{session}/.brainstorming/product-owner/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "product_owner": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/product-owner/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/product-owner/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/skills/command-guide/reference/commands/workflow/brainstorm/scrum-master.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute scrum-master analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: scrum-master
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/scrum-master/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/scrum-master/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/scrum-master/
+.workflow/active/WFS-{session}/.brainstorming/scrum-master/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "scrum_master": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/scrum-master/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/scrum-master/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/skills/command-guide/reference/commands/workflow/brainstorm/subject-matter-expert.md

@@ -27,10 +27,10 @@ allowed-tools: Task(conceptual-planning-agent), TodoWrite(*), Read(*), Write(*)
 ### Phase 1: Session & Framework Detection
 ```bash
 # Check active session and framework
-CHECK: .workflow/.active-* marker files
+CHECK: find .workflow/active/ -name "WFS-*" -type d
 IF active_session EXISTS:
     session_id = get_active_session()
-    brainstorm_dir = .workflow/WFS-{session}/.brainstorming/
+    brainstorm_dir = .workflow/active/WFS-{session}/.brainstorming/
 
     CHECK: brainstorm_dir/guidance-specification.md
     IF EXISTS:
@@ -67,13 +67,13 @@ Execute subject-matter-expert analysis for existing topic framework
 
 ## Context Loading
 ASSIGNED_ROLE: subject-matter-expert
-OUTPUT_LOCATION: .workflow/WFS-{session}/.brainstorming/subject-matter-expert/
+OUTPUT_LOCATION: .workflow/active/WFS-{session}/.brainstorming/subject-matter-expert/
 ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 ## Flow Control Steps
 1. **load_topic_framework**
    - Action: Load structured topic discussion framework
-   - Command: Read(.workflow/WFS-{session}/.brainstorming/guidance-specification.md)
+   - Command: Read(.workflow/active/WFS-{session}/.brainstorming/guidance-specification.md)
    - Output: topic_framework_content
 
 2. **load_role_template**
@@ -83,7 +83,7 @@ ANALYSIS_MODE: {framework_mode ? "framework_based" : "standalone"}
 
 3. **load_session_metadata**
    - Action: Load session metadata and existing context
-   - Command: Read(.workflow/WFS-{session}/workflow-session.json)
+   - Command: Read(.workflow/active/WFS-{session}/workflow-session.json)
    - Output: session_context
 
 ## Analysis Requirements
@@ -143,7 +143,7 @@ TodoWrite({
 
 ### Framework-Based Analysis
 ```
-.workflow/WFS-{session}/.brainstorming/subject-matter-expert/
+.workflow/active/WFS-{session}/.brainstorming/subject-matter-expert/
 └── analysis.md    # Structured analysis addressing guidance-specification.md discussion points
 ```
 
@@ -188,7 +188,7 @@ TodoWrite({
   "subject_matter_expert": {
     "status": "completed",
     "framework_addressed": true,
-    "output_location": ".workflow/WFS-{session}/.brainstorming/subject-matter-expert/analysis.md",
+    "output_location": ".workflow/active/WFS-{session}/.brainstorming/subject-matter-expert/analysis.md",
     "framework_reference": "@../guidance-specification.md"
   }
 }

.claude/skills/command-guide/reference/commands/workflow/brainstorm/synthesis.md

@@ -48,7 +48,7 @@ Three-phase workflow to eliminate ambiguities and enhance conceptual depth in ro
 
 ### Phase 1: Discovery & Validation
 
-1. **Detect Session**: Use `--session` parameter or `.workflow/.active-*` marker
+1. **Detect Session**: Use `--session` parameter or find `.workflow/active/WFS-*` directories
 2. **Validate Files**:
    - `guidance-specification.md` (optional, warn if missing)
    - `*/analysis*.md` (required, error if empty)
@@ -59,7 +59,7 @@ Three-phase workflow to eliminate ambiguities and enhance conceptual depth in ro
 **Main flow prepares file paths for Agent**:
 
 1. **Discover Analysis Files**:
-   - Glob(.workflow/WFS-{session}/.brainstorming/*/analysis*.md)
+   - Glob(.workflow/active/WFS-{session}/.brainstorming/*/analysis*.md)
    - Supports: analysis.md, analysis-1.md, analysis-2.md, analysis-3.md
    - Validate: At least one file exists (error if empty)
 
@@ -69,7 +69,7 @@ Three-phase workflow to eliminate ambiguities and enhance conceptual depth in ro
 
 3. **Pass to Agent** (Phase 3):
    - `session_id`
-   - `brainstorm_dir`: .workflow/WFS-{session}/.brainstorming/
+   - `brainstorm_dir`: .workflow/active/WFS-{session}/.brainstorming/
    - `role_analysis_paths`: ["product-manager/analysis.md", "system-architect/analysis-1.md", ...]
    - `participating_roles`: ["product-manager", "system-architect", ...]
 
@@ -361,7 +361,7 @@ Updated {role2}/analysis.md with Clarifications section + enhanced content
 
 ## Output
 
-**Location**: `.workflow/WFS-{session}/.brainstorming/[role]/analysis*.md` (in-place updates)
+**Location**: `.workflow/active/WFS-{session}/.brainstorming/[role]/analysis*.md` (in-place updates)
 
 **Updated Structure**:
 ```markdown